LOCUS       XM_008760146            2104 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus lymphocyte-specific protein 1 (Lsp1),
            transcript variant X2, mRNA.
ACCESSION   XM_008760146
VERSION     XM_008760146.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008760146.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2104
                     /gene="Lsp1"
                     /note="lymphocyte-specific protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 12 ESTs, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     18 samples with support for all annotated introns"
                     /db_xref="GeneID:361680"
                     /db_xref="RGD:1306133"
     CDS             623..1726
                     /gene="Lsp1"
                     /codon_start=1
                     /product="lymphocyte-specific protein 1 isoform X1"
                     /protein_id="XP_008758368.1"
                     /db_xref="GeneID:361680"
                     /db_xref="RGD:1306133"
                     /translation="MLKIANGTQGRQSLPWRCWCQGSDTLDAPGDFGGLLRKCALPGR
                     NGEEEAEQRKRARTRLTTQWREEDEEEAAREQRQRERERQLQDQDKDEEDEGGHFLEQ
                     PGQQALVSLKSSELDEDEGFGDWSQKQEPPRQQSWENEGTAEGSEPSPSESAEEKQTE
                     DSSHQAKVHLEESNLSHSDPNIEDDVGGSGETEEHLISHQARTPSPLALEDTAELSSP
                     PLSPTVKLADRTESLNRSIQKSNSVKKSQPTLPISTIDERLQQYTQATESAGRTPKLS
                     RQPSIELPSMAVASTKTLWETGEVQTQSASKTPSCQDIVAGDMSKKSLWEQKGGSKIS
                     STIKSTPSGKRYKFVATGHGKYEKVLVDEGSAP"
ORIGIN      
        1 aggcaggctc ccacccaaac gtgtggccca ctgggtcccc ggggatccca gtgtggcaga
       61 gggtagcaga tggggctggc agtctgctgg gtggcccagt tgggggaggg gaagccaggc
      121 ctccaaccac agtgtccagg gaggcgtggc tccacgggcc cattggaggc cgagatcccg
      181 agggtggggt agccccaccc tggcaggccg ggtggccggt gggcggcacc cccacgggcc
      241 gggtggtctg tctgccagag cctgtcctgc ctggagcctg gccgagctag cagcaggggg
      301 tacagggacc aagtggccca gccccctggg cagggtgtca gggccagaac ccagaggact
      361 gaggttccgg ttccagtccc agccggtgcg tcagagctgg gtagatcaga cagcaagcag
      421 caaccagggc gccaaggcac ccagagactc acccacccta tgtttctgcc ggagtcagga
      481 ggggacaccc agagactctt gggacccttg ggatagctgc aggggcacag tccccaggga
      541 cactgctaca ggcccagagc atctcgccag agaacaatgc caggatggag caccaaggtc
      601 tgtggaggac agggcagggc acatgctgaa gatagctaac ggtactcagg gaagacagag
      661 cctgccctgg agatgctggt gccaggggag tgacacattg gatgctcctg gggactttgg
      721 aggtctcctg agaaaatgtg ccctaccagg taggaatgga gaagaggaag cagagcaaag
      781 aaagagagca agaaccaggc tcacaactca gtggagagaa gaagatgaag aagaggccgc
      841 ccgtgagcag cgccaacggg agcgagagag gcagctgcag gaccaggaca aagatgaaga
      901 agatgaaggt ggccatttcc tggaacagcc agggcagcag gcactcgtta gcctgaagtc
      961 ctctgaactg gatgaagatg agggttttgg tgactggtct caaaagcagg agccaccaag
     1021 gcagcaatcc tgggagaatg aggggactgc agaggggtcg gaaccctctc caagtgagag
     1081 tgcagaggag aaacaaacag aggacagttc tcaccaagct aaagtccact tggaggagtc
     1141 aaacctgagc cacagtgacc ccaatataga ggatgatgtc gggggttctg gggagacaga
     1201 agagcatctg ataagtcatc aggccaggac ccccagccct ttggccttgg aagacactgc
     1261 tgagctgagc tcacctcccc tgagccctac cgtcaaactg gctgatagga cagaatccct
     1321 gaaccgctcc attcaaaaga gcaacagtgt gaagaagtct caaccaacct tgcccatttc
     1381 caccatcgat gagcgcctgc agcagtacac ccaggccact gagtctgctg gccgaactcc
     1441 caagctgtcc cgccagccct ccatagagct gcccagcatg gctgtagcca gtaccaagac
     1501 tctttgggag acaggagagg tgcagactca gtctgcttcc aagacaccct cctgccagga
     1561 tatagtagct ggagacatga gcaagaaaag tctgtgggaa cagaaaggag gctccaagat
     1621 ctcatccacc atcaagagca ccccatctgg aaagaggtac aagtttgtgg ccactggaca
     1681 cgggaagtac gagaaagtgc tcgtggatga gggctcagca ccatagacca cgtatgcatc
     1741 ctgactccaa ccagatgcca ctcccagccc tgaccaagaa attgcttcct gttgccagtc
     1801 tggcccgctc tcctgcctcc agcaacccag ctgccacttg cctctcctct tgctactgga
     1861 ccctccatct tctatgccct ctcatcctct gaccaaccct ccaactctgc ttctcatcat
     1921 cagctaaagg gaccagccca tagaggagcc gagagctccc aaggaaggat ggaggagaga
     1981 aggcaagcat cccaaccaga tccaaggggt aactgtcccc atgctgaatg ctcaggactc
     2041 caagtcctgc cctgtttatg gatccttcgt tttgtgtaat aaagtgcatt gagtgtcccc
     2101 tatg
//
