LOCUS       NM_001398683            1355 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus leucine-rich single-pass membrane protein 1
            (Lsmem1), mRNA.
ACCESSION   NM_001398683 XM_001058983
VERSION     NM_001398683.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Dec 21, 2021 this sequence version replaced XM_001058983.7.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ137106.1, FQ127586.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-302               JAXUCZ010000006.1  62988449-62988750   c
            303-434             JAXUCZ010000006.1  62984984-62985115   c
            435-563             JAXUCZ010000006.1  62983278-62983406   c
            564-1355            JAXUCZ010000006.1  62978880-62979671   c
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q21"
     gene            1..1355
                     /gene="Lsmem1"
                     /note="leucine-rich single-pass membrane protein 1"
                     /db_xref="GeneID:680810"
                     /db_xref="RGD:1587073"
     exon            1..302
                     /gene="Lsmem1"
                     /inference="alignment:Splign:2.1.0"
     exon            303..434
                     /gene="Lsmem1"
                     /inference="alignment:Splign:2.1.0"
     CDS             308..694
                     /gene="Lsmem1"
                     /codon_start=1
                     /product="leucine-rich single-pass membrane protein 1"
                     /protein_id="NP_001385612.1"
                     /db_xref="GeneID:680810"
                     /db_xref="RGD:1587073"
                     /translation="MTHSSQDAGSHDVHEEGKLYVVDSINDLNKLNLCPTESQHLFSL
                     EEKIPNTGTTPRNGRQGMFFVGLLLVLMVSLALVFFSIFLIIQTGNKMEDVSRRLTVE
                     GKDIDDLKKINNMIVKRLNQLDSEQN"
     exon            435..563
                     /gene="Lsmem1"
                     /inference="alignment:Splign:2.1.0"
     exon            564..1355
                     /gene="Lsmem1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacagttacc aaccgaaatc aaggcttgct ggtttgttgt tttaaagcca agtttcagcg
       61 atgcatatct aaaactctta gacattatag gggaagccag tgcagggaat cttgcagctc
      121 ttgactaaat ttacactaaa tatagactac caattatgtg ctgggtttat gggcctcagg
      181 ggagcactcg tgagcagcag ggagatcaag aacacactac agaattggta gaaagttttg
      241 ctgttgttgt tcctgaatag ttgtcgtttc cggataactg agcagtccag gatcacgtct
      301 tcgcacaatg actcattcct ctcaggatgc tggatctcat gacgtccatg aagaaggaaa
      361 actctatgtc gtggattcca taaacgactt aaacaaactc aatctctgtc cgacggaatc
      421 acagcatcta ttctctttag aggagaaaat cccaaacact ggcacaactc ccagaaatgg
      481 aaggcagggt atgttttttg tggggctgct cctggtgttg atggtcagcc tggctctggt
      541 cttcttctcc atcttcctaa taattcaaac aggaaataag atggaggacg tgtcaagaag
      601 actgacagtt gagggaaagg acatagatga tcttaagaaa atcaacaaca tgatcgtaaa
      661 gcggctcaac caactggact ctgaacagaa ctgaaaggat tttcccccaa gagtggtcat
      721 ggataccaga gctcacttgc tggaagtaca ccaggactgg gaaaatgcag ttcttcaggc
      781 agtggatacg atctattata cctccttgtt caaggatgga aataacgctc agggaacgag
      841 tttaaagatg gcagctgaaa tgggggaact tgattcagcc ttattgactg ctagctggct
      901 gcttcagttt tcagtggcgt tagagtggtg ggcggctagc gtgagaagag aacttagctc
      961 tttacatgca actacttttt gaaaataaac ttggtttaga agatttcgaa tattctagtg
     1021 aggtctatga tgcctcacgt acctgtacag attcctgcac acgcctaaag aatgcactga
     1081 actgtctgtg ctgaggtgaa ccaggtgcta ctcttttcag tagcgtacat gcttcttttc
     1141 gggtgacact ttgatgacag cttccgagcc ctgttaggtg atcgctggag aaaacatggc
     1201 tagcatgaag tatgggtagt gatactgagg aataagagat atatactact actagttcct
     1261 tccttgactt tagagaccct actatactca tatggaaaga aggaagtatg tctatttata
     1321 tcgtctacaa gctcggctag cttcatcatg aaaaa
//
