LOCUS       NM_001108976             844 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus LSM10, U7 small nuclear RNA associated (Lsm10),
            mRNA.
ACCESSION   NM_001108976 XM_001056695 XM_345581
VERSION     NM_001108976.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Yang,X.C., Torres,M.P., Marzluff,W.F. and Dominski,Z.
  TITLE     Three proteins of the U7-specific Sm ring function as the molecular
            ruler to determine the site of 3'-end processing in mammalian
            histone pre-mRNA
  JOURNAL   Mol Cell Biol 29 (15), 4045-4056 (2009)
   PUBMED   19470752
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Fu,D. and Collins,K.
  TITLE     Purification of human telomerase complexes identifies factors
            involved in telomerase biogenesis and telomere length regulation
  JOURNAL   Mol Cell 28 (5), 773-785 (2007)
   PUBMED   18082603
REFERENCE   3  (bases 1 to 844)
  AUTHORS   Wagner,E.J. and Marzluff,W.F.
  TITLE     ZFP100, a component of the active U7 snRNP limiting for histone
            pre-mRNA processing, is required for entry into S phase
  JOURNAL   Mol Cell Biol 26 (17), 6702-6712 (2006)
   PUBMED   16914750
REFERENCE   4  (bases 1 to 844)
  AUTHORS   Pillai,R.S., Will,C.L., Luhrmann,R., Schumperli,D. and Muller,B.
  TITLE     Purified U7 snRNPs lack the Sm proteins D1 and D2 but contain
            Lsm10, a new 14 kDa Sm D1-like protein
  JOURNAL   EMBO J 20 (19), 5470-5479 (2001)
   PUBMED   11574479
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_345581.3, XM_001056695.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC166902.1, AW916461.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMD00132261, SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..844
                     /gene="Lsm10"
                     /note="LSM10, U7 small nuclear RNA associated"
                     /db_xref="GeneID:366468"
                     /db_xref="RGD:1584914"
     exon            1..90
                     /gene="Lsm10"
                     /inference="alignment:Splign:2.1.0"
     exon            91..844
                     /gene="Lsm10"
                     /inference="alignment:Splign:2.1.0"
     CDS             115..483
                     /gene="Lsm10"
                     /note="U7 snRNP-specific Sm-like protein LSM10"
                     /codon_start=1
                     /product="U7 snRNA-associated Sm-like protein LSm10"
                     /protein_id="NP_001102446.1"
                     /db_xref="GeneID:366468"
                     /db_xref="RGD:1584914"
                     /translation="MALSHSVKERTISENSLIILLQGLQGQITTVDLRDESVARGRID
                     NVDAFMNIRLANVTYTDRWGHQVELDDLFVTGRNVRYVHIPDGVNITATIEQQLQIIH
                     RVRNFGGKGQGRREFPSKRP"
ORIGIN      
        1 agtgtgggga ctagggttcg ctgggacccg ggcggcctct tcccttggcg cactggctgc
       61 ggactcttct tcccaaaccc cttacgcgcg tgagcagcca accaatgtgg aaaaatggca
      121 ctgagccact ctgtgaagga gcgaaccatc tctgagaaca gcctgatcat cctgttgcaa
      181 ggcctccagg gacaaataac cactgtggac cttcgagatg agagtgtggc ccgaggacgc
      241 atcgacaacg ttgatgcttt catgaacatc cgtctggcca atgtcaccta caccgaccgc
      301 tgggggcatc aggttgagtt ggatgacctt ttcgtgacag gtcgtaatgt ccgatatgtc
      361 catatcccag acggtgtgaa catcactgcc acaatcgagc agcagctaca gatcatccac
      421 cgtgtgcgca actttggtgg caagggtcaa ggtcgtcgag agttcccctc caaaaggcca
      481 tgagactgtg tcctcattca aattccagca ccacctcagg gacctccagt gttctgagcc
      541 aactcccgtc catccttccc caccaatgac ctggtgtctt atagacacat cacagctgcc
      601 tttcataggg ttccactttt cagacacacc ttgggaccca gaattccttc tgctggtggc
      661 cttggggtag gtgacaatcc ctctttttga tcatttgtat ctggaatctc cattcactga
      721 ttgaccccat ccatcaagga gttgttaact ctgccagtga ggattacttg agagtgtttg
      781 gagtgaatca cctctaacat cccatttctc ttgtcatttg tttcttttct cataaaacca
      841 aact
//
