LOCUS       NM_001024761            1836 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus LRR binding FLII interacting protein 2 (Lrrfip2),
            transcript variant 1, mRNA.
ACCESSION   NM_001024761 XM_217271
VERSION     NM_001024761.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1836)
  AUTHORS   Dai,P., Jeong,S.Y., Yu,Y., Leng,T., Wu,W., Xie,L. and Chen,X.
  TITLE     Modulation of TLR signaling by multiple MyD88-interacting partners
            including leucine-rich repeat Fli-I-interacting proteins
  JOURNAL   J Immunol 182 (6), 3450-3460 (2009)
   PUBMED   19265123
REFERENCE   2  (bases 1 to 1836)
  AUTHORS   Fong,K.S. and de Couet,H.G.
  TITLE     Novel proteins interacting with the leucine-rich repeat domain of
            human flightless-I identified by the yeast two-hybrid system
  JOURNAL   Genomics 58 (2), 146-157 (1999)
   PUBMED   10366446
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC097955.1.
            
            On Jun 10, 2005 this sequence version replaced XM_217271.3.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097955.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..1836
                     /gene="Lrrfip2"
                     /note="LRR binding FLII interacting protein 2"
                     /db_xref="GeneID:301035"
                     /db_xref="RGD:1306234"
     exon            1..212
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            213..284
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            285..428
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     CDS             339..1652
                     /gene="Lrrfip2"
                     /note="isoform 1 is encoded by transcript variant 1;
                     leucine-rich repeat flightless-interacting protein 2; LRR
                     FLII-interacting protein 2; leucine rich repeat (in FLII)
                     interacting protein 2"
                     /codon_start=1
                     /product="leucine-rich repeat flightless-interacting
                     protein 2 isoform 1"
                     /protein_id="NP_001019932.1"
                     /db_xref="GeneID:301035"
                     /db_xref="RGD:1306234"
                     /translation="MGTPGSGRKRTPVKDRFSAEDEALSNIAREAEARLAAKRAARAE
                     ARDIRMRELERQQRESSSKDITGTHWSRASTPKRRDMMYDSIKDRSSRVSSLLDEKSD
                     KQYAENYTRPSSRNSASATTPLSGNSSRRGSGDTSSLIDPDTSLSELRESLSEVEEKY
                     KKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQEEQMAEFYRENEEKSKELERQKHMCSV
                     LQHKMDELKEGLRQRDELIEKHGLVIIPESTPNGDVNHEPVVGAITAVSQEAAQVLES
                     AGEGPLDVRLRKLAEEKDELLSQIRKLKLQLEEERQKCSRNDGMSGDLAGLQNGSDLQ
                     FIEMQRDANRQISEYKFKLSKAEQDIATLEQSISRLEGQVLRYKTAAENAEKIEDELK
                     AEKRKLQRELRTAQDKIEEMEMTNSHLAKRLEKMKANRTALLAQQ"
     exon            429..515
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            516..584
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            585..626
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            627..671
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            672..788
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            789..959
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            960..1052
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            1053..1185
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            1186..1235
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            1236..1356
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            1357..1436
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            1437..1541
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
     exon            1542..1812
                     /gene="Lrrfip2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctggggtt gcctggaggg tctccggcta gcttctcccg ccccccgcgg gggaaaaaag
       61 ggttacgccc cttggaccgg gcatcacttg ggacagctgg gtgctccagc tcccgttgct
      121 cccggcgcca cactctctca gactctttcc cctgtcccgg gaggagccgc cccgggaacg
      181 gtgtcaggcc ggtggagggc gtagcttttt aaatgtggga agacaaatga agggatttag
      241 aaaccaaata aatgccagtg gaaaggagag ctaccatcac taagtgctga acacgagtaa
      301 actcattttc agagttaaaa aattattaaa aaaacaagat ggggactcct ggttctggaa
      361 ggaaaagaac accagtgaaa gatcgatttt ctgcagaaga tgaagctttg agtaacatcg
      421 ccagagaggc tgaagcaagg ctagcagcaa agcgggccgc cagggcagaa gcaagagaca
      481 tccgcatgag ggaactggaa cgacagcaga gagagagttc atcgaaggat attactggaa
      541 cacactggag cagagccagt acgcccaaga ggagagacat gatgtatgat tccatcaagg
      601 acagatcatc aagagtttca tcattattgg atgaaaaatc tgacaaacag tatgctgaaa
      661 attacacaag accctcatct cgaaattctg cgtcagcaac aacacctcta agcggaaact
      721 catccagacg gggtagtggg gacaccagta gtttaataga cccagacacc tcgttaagtg
      781 aactgcggga gtctttgtct gaagtagaag agaagtacaa gaaagccatg gtgtccaatg
      841 cacaactaga caacgagaag aacaatctga tctaccaggt ggacaccctc aaggacgtca
      901 tcgaggagca ggaggagcag atggcagagt tctatagaga aaacgaagag aaatcaaagg
      961 agttggaacg gcagaaacat atgtgcagtg tgctgcagca taagatggat gaactgaaag
     1021 agggccttcg gcagagggac gagctcatcg agaagcacgg cttagttata atcccagaga
     1081 gtactcccaa tggcgacgtc aatcatgagc ctgtggttgg agccattact gctgtgtctc
     1141 aggaagctgc tcaggtcttg gagtcagcag gagaagggcc actagatgtg aggctgcgga
     1201 agcttgctga ggaaaaggac gagctcctgt cacagattag aaaactgaag ctccagttag
     1261 aggaagaacg gcagaagtgt tccaggaatg atggcatgtc cggggacctg gcagggctgc
     1321 agaacggctc cgacttgcag ttcatcgaga tgcagagaga cgccaataga caaattagtg
     1381 aatacaaatt caagctttcg aaagcagaac aagacatagc taccttggaa caaagtatca
     1441 gccggcttga ggggcaggtg ctgaggtaca agactgccgc tgagaacgct gagaagattg
     1501 aagacgagct gaaagcagag aagaggaagc tacagcgaga gctacggaca gcacaggaca
     1561 agatcgagga gatggagatg accaacagcc acctggcaaa gcggctagag aagatgaagg
     1621 ccaacaggac agcccttcta gcccagcagt aggaggcagc ccctccacct gggtgctgct
     1681 ctgagggctt tgctgggaga tactgactct tgtacattga cacagcccct tccagtactg
     1741 ttttgagtct tgtcattaaa cagccacctt tgtattttat aatttatgag aatgaagcag
     1801 gtttaatcgt taaaaaaaaa aaaaaaaaaa aaaaaa
//
