LOCUS       NM_001037783            1808 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus leucine rich repeat containing 74A (Lrrc74a),
            mRNA.
ACCESSION   NM_001037783 XM_234428
VERSION     NM_001037783.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1, BC127444.1 and CR475527.1.
            
            On May 29, 2008 this sequence version replaced NM_001037783.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC127444.1, SRR26643293.36457.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-9                 JAXUCZ010000006.1  112117299-112117307
            10-1727             BC127444.1         1-1718
            1728-1805           JAXUCZ010000006.1  112147075-112147152
            1806-1808           CR475527.1         1-3                 c
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..1808
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /note="leucine rich repeat containing 74A"
                     /db_xref="GeneID:314328"
                     /db_xref="RGD:1564488"
     exon            1..279
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     CDS             237..1676
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /note="leucine-rich repeat-containing protein 74; leucine
                     rich repeat containing 74; uncharacterized protein
                     C14orf166B homolog"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 74A"
                     /protein_id="NP_001032872.2"
                     /db_xref="GeneID:314328"
                     /db_xref="RGD:1564488"
                     /translation="MDDDDIEPLEYETKDETEAALAPQSSEDTLYCEAEAAPSVEKEK
                     PTREDSETDLEIEDTEKFFSIGQKELYLEACKLVGVVPVSYFIRNMEESCMNLNHHGL
                     GPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLGL
                     EGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDT
                     AGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGA
                     LALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGAYS
                     LILAIKRNPKSRMEDLDISNVLVSEQFVKVLDGVCAIHPQLDVVYKGLQGLSTKKTVS
                     LETNPIKLIQNYTDQNKISVVEFFKSLNPSGLMTMPVGDFRKAIIQQTNIPINRYQAR
                     ELIKKLEEKNGMVNFSGFKSLKVTAAGQL"
     exon            280..408
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            409..581
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            582..689
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            690..786
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            787..836
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            837..918
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            919..1004
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            1005..1199
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            1200..1295
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            1296..1442
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            1443..1550
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            1551..1633
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
     exon            1634..1805
                     /gene="Lrrc74a"
                     /gene_synonym="Lrrc74"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgatgagcc ccaggcctag ctggtgacaa atccatacat gccggattcc catcaaagcc
       61 ggctctcctc caagcttgct gggatgaaaa aatagctaca gattcccttg ggattcaccc
      121 tcaagagaac agtgcacata gtttgaaaca gagcctaatg gacaggtgtg caccttaggg
      181 aagcagctac caggggacaa gaagctgtca ccagccccca agggagtcct ggcagcatgg
      241 acgacgacga tattgagcct cttgagtacg agaccaaaga tgaaactgaa gctgccttgg
      301 cacctcagag cagcgaagac accctctact gtgaggctga agccgctcca agtgttgaga
      361 aagagaaacc taccagggag gattcggaga cagacctgga aattgaagac acagagaaat
      421 tcttcagcat cggacagaag gagctgtact tggaggcctg caaactggtg ggtgtggtcc
      481 ctgtctccta cttcatccgg aacatggagg agtcctgcat gaacctcaac caccatggtc
      541 tgggccccat gggtatcaaa gccattgcta taactctggt gtccaacacc acggtcctca
      601 aactggagct ggaagacaac tccatccagg aggagggcat cctgagtctg atggagatgc
      661 tgcatgagaa ctactaccta caggagctaa atgtgtctga caataacctt ggtttggaag
      721 gagccaggat catctcggac ttcctccagg agaataactc atcgctctgg aaactgaaac
      781 tctcaggaaa caaattcaag gaagaatgtg ccttactttt atgccaagcc ttgtcgtcca
      841 attaccgaat caggtcactg aatctcagcc acaacgagtt ctctgacact gcaggggagt
      901 acctgggaca gatgctggcc ctcaacgtag ggctccagtc actgaacctg agctggaatc
      961 atttcaatgt tcgtggagct gtggccctgt gtaatggtct ccggactaat gtgaccctga
     1021 agaaactgga cgtatccatg aatggctttg ggaatgatgg tgccttggcc ctgggagata
     1081 ccctcaagct caacagctgt ctggtctacg tggatgtcag tagaaatggc atcaccaatg
     1141 agggggcctc caggatcagc aagggcctag aaaataatga gtgtctccaa gtgctgaagc
     1201 ttttcctgaa ccctgtgagc ttggaggggg catattccct tatcttggcg atcaagagga
     1261 accccaaatc caggatggaa gaccttgaca tttctaacgt actggtttca gagcagttcg
     1321 tcaaagtctt ggatggagtc tgtgccattc accctcagtt agatgtggta tacaagggat
     1381 tgcagggtct ctccaccaag aaaaccgtct ccctggagac caaccccata aagctgatcc
     1441 agaactatac agaccaaaac aagatctcag tagtggagtt cttcaagagc ttgaatcctt
     1501 ctggattaat gaccatgcct gtgggagact tccggaaagc cataatccag caaaccaata
     1561 ttcccatcaa ccggtaccag gcgagggagc tgataaagaa gctggaagag aagaatggta
     1621 tggttaactt cagtggtttt aaaagcctga aagtcacagc agctggtcag ctctgaagag
     1681 aagtgccaat aaaagaagtc ctggcaagtc gtgtggctct gaggagacta agccaaaggc
     1741 cagatggaaa gataccacga ccagagctaa gtgtgagcaa ataaaatctg gcttgattct
     1801 gggcaaaa
//
