LOCUS       NM_001024360            1381 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus leucine rich repeat containing 73 (Lrrc73), mRNA.
ACCESSION   NM_001024360
VERSION     NM_001024360.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1381)
  AUTHORS   Bailey,M.J., Coon,S.L., Carter,D.A., Humphries,A., Kim,J.S.,
            Shi,Q., Gaildrat,P., Morin,F., Ganguly,S., Hogenesch,J.B.,
            Weller,J.L., Rath,M.F., Moller,M., Baler,R., Sugden,D.,
            Rangel,Z.G., Munson,P.J. and Klein,D.C.
  TITLE     Night/day changes in pineal expression of >600 genes: central role
            of adrenergic/cAMP signaling
  JOURNAL   J Biol Chem 284 (12), 7606-7622 (2009)
   PUBMED   19103603
  REMARK    GeneRIF: Expression of Nod3l in the rat pineal gland exhibits a
            robust daily rhythm, with ~20-fold higher values at night.
            Expression is controlled by an adrenergic cyclic AMP mechanism.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC128712.1.
            
            On Dec 10, 2006 this sequence version replaced NM_001024360.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC128712.1, AB210855.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..1381
                     /gene="Lrrc73"
                     /gene_synonym="nod3l"
                     /note="leucine rich repeat containing 73"
                     /db_xref="GeneID:501101"
                     /db_xref="RGD:1561390"
     exon            1..372
                     /gene="Lrrc73"
                     /gene_synonym="nod3l"
                     /inference="alignment:Splign:2.1.0"
     CDS             101..1051
                     /gene="Lrrc73"
                     /gene_synonym="nod3l"
                     /note="NOD3-like protein; uncharacterized protein C6orf154
                     homolog"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 73"
                     /protein_id="NP_001019531.1"
                     /db_xref="GeneID:501101"
                     /db_xref="RGD:1561390"
                     /translation="MLPSSIQISGEPLSGAEVRDICRGLRDNAVRLLSLRGCRLCDRD
                     FGRICRALAGATSLAQLNLNLGVVSSPSRIKQLAEALRTNRSIQSLFLHGSPLTDAGL
                     ALLNPALALHPALVALDLGDCMLGDEAINLICGLLPPDGAKSGLKELTLSANPGITPK
                     GWSRLAIAVAHSSQVRVLNLDYNPLGDHVAGMLAVAVASSRTLEVLDLEGTGLTNQSA
                     QTLLDMVENYPTALRSLVLAENSISPELQQQICDLLSEGEEEEEMAGGAADTQEWGRG
                     REPAAHQRGGSSWKCPSDPNSQMVLMTSGLGDSLLAETEM"
     exon            373..533
                     /gene="Lrrc73"
                     /gene_synonym="nod3l"
                     /inference="alignment:Splign:2.1.0"
     exon            534..656
                     /gene="Lrrc73"
                     /gene_synonym="nod3l"
                     /inference="alignment:Splign:2.1.0"
     exon            657..757
                     /gene="Lrrc73"
                     /gene_synonym="nod3l"
                     /inference="alignment:Splign:2.1.0"
     exon            758..980
                     /gene="Lrrc73"
                     /gene_synonym="nod3l"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1299
                     /gene="Lrrc73"
                     /gene_synonym="nod3l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctgagtccc ctccccgccc cgccccctcc cgcagcccgg ccaacttctg cccaggccgg
       61 gacaccggcg ccagcccccc gaggcccagc cgtggggacc atgctgccta gctccatcca
      121 gatttcgggg gagccgctgt caggcgccga ggtgcgggac atctgccgcg gcctgcgcga
      181 caacgcggtg cgcctgctct cgctgcgcgg ctgtcgcctg tgcgaccgcg acttcggccg
      241 catctgccgg gccctagctg gagccacgtc cctggcgcag ctcaacctta acctgggcgt
      301 cgtgtctagc cccagccgca tcaagcagct ggcagaagcg ctacggacca accgctccat
      361 ccagtccctc ttcctacatg gaagcccact gacagatgcg ggactggcct tgctgaatcc
      421 agccctggct ctccaccctg cccttgtggc tcttgacctg ggggactgca tgttgggtga
      481 tgaagccatc aacctcatct gtggcctcct ccctccagac ggggccaagt ctggtctgaa
      541 ggagctaaca ctaagcgcca accctggcat cacccctaag ggctggagcc gtctcgctat
      601 tgctgtggcc cacagctccc aagtccgagt tctcaacctg gactacaacc ctctgggtga
      661 ccatgtggca gggatgctgg ctgtagctgt ggcctcaagc cgtaccctag aagtcctaga
      721 cttggagggc acagggctca ccaaccagtc agctcagacc ctgctggaca tggtagaaaa
      781 ttacccaaca gccttgcgga gcctcgtgtt ggctgagaac agcattagcc cagagctgca
      841 acagcagatc tgtgacctcc tgtctgaggg agaagaggag gaagagatgg caggaggggc
      901 tgctgacacc caggaatggg ggagagggcg agagcctgct gcccaccagc ggggtggcag
      961 ctcctggaag tgccccagtg atcccaattc tcagatggtg ctaatgacat caggactagg
     1021 ggacagtctg ttggctgaga ccgagatgtg actctctact tggacttctg cacatcatta
     1081 cacgtctgtg tccccactac cttcctctac atggcaggga aaggccgtgg ctggggctct
     1141 ggcagttccc aatagtggta cgagctctga atgctgtcag tgggcaacag cctcgggggg
     1201 tggtggggac ttgaacccag ggtactgact ttgaacttgc tggcagctct ggctgcaacc
     1261 cgctggctcg gaacagattt tataaactcc acaacctgaa aaaaaaaaaa aaaaaaaaaa
     1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1381 a
//
