LOCUS       NM_001107701            4313 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus leucine rich repeat containing 71 (Lrrc71), mRNA.
ACCESSION   NM_001107701 XM_001055847 XM_001067859 XM_001067910 XM_227479
VERSION     NM_001107701.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4313)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473976.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_227479.4, XM_001055847.1, XM_001067910.1, XM_001067859.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4313
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..4313
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /note="leucine rich repeat containing 71"
                     /db_xref="GeneID:310689"
                     /db_xref="RGD:1309453"
     exon            1..571
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     CDS             412..2088
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 71"
                     /protein_id="NP_001101171.1"
                     /db_xref="GeneID:310689"
                     /db_xref="RGD:1309453"
                     /translation="MSSEPSATGTSPRTPRPGTQKSSGAVTKKGDRAAKDKAASVLPP
                     VGEEESKNPEEYQCTGVLETDFAELCARSGYTDFPKVVTRPRPQQSFVPSASMSEKPV
                     QDDQRLSASCSQNSLESKYVFFRPTIQVELEQEDSKTVKEIYIRGWKIEERILGIFSK
                     CLPPLSQLQAINLWKVGLTEKTLTAFIALLPLCSPTLRKVSLEGNPIPEQSFNKLMGL
                     DSTIVHLSLRNNNINDHGAQLLGQALSTLHSSNRTLVSLNLAFNHIGDEGAGYIADGL
                     RLNRSLLWLSLAHNHIQDKGALKLAEVLRPFELTHREVVERRRLLLVKGTQERSRSPS
                     SSRHGDSKTDREKSQNLGISNVTLVDKAEKMQSMKAPRTIGKKKEKSGEVVKKEEKLG
                     PGQSPTQGTPKKEDAPKAGKGKVTIPEQKISKGKATKTGAKEKRSILLESEQLVVEAT
                     EMVNPLLEPVEHRDGKVFLPGNKVLLHLNLLRNQITEVGLEGFLTAVQYQVQVSKSKT
                     SPKAPLGLLWLSLAKNCFDPQCPTHIMIQELMLPRDPVKAKVREEEATAT"
     exon            572..721
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            722..850
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            851..926
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            927..1004
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1005..1073
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1074..1233
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1234..1317
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1407
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1408..1557
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1558..1651
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1652..1740
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1741..1855
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1856..1977
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
     exon            1978..4313
                     /gene="Lrrc71"
                     /gene_synonym="RGD1309453"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tccaggtagc tgagtagagg agaactcagc gtagcccgaa ccctgaccac ttgggctctt
       61 cacaaggcac tctcctccgt cctctccccc caaccccctg cgagcacaga ccgttagggg
      121 cctaccccac actgccctag aatccacaca tctatgccct acccggaacc cttctctgtt
      181 tacacagacc cctaaccgtg cctagccacg cccactggcc ctggcagggg ctgagtctgg
      241 ggccttcacg tgcactctct gccggttgct ccggccacag ccccacccaa tcaggctcgg
      301 ttgccctgga gagggcagtc gcaagagtcg cttggctgac tggagatcct cagagtgagg
      361 cccacagagt ttcatcttgc ctctcactcg gaggggtcca aaaccaccgc tatgtcaagt
      421 gagccaagcg ctacaggaac ctcacccagg acaccgcgtc ctgggaccca aaagtcatct
      481 ggtgcagtaa ccaagaaggg ggatcgggct gctaaagata aggcagcaag tgtcctgccc
      541 ccggtgggtg aggaagagtc aaaaaatccc gaggagtacc agtgcactgg ggtcctggag
      601 acggacttcg ctgagctctg cgcacggtca ggatacacgg actttcccaa agttgtcacc
      661 cggccacggc cccaacagag ctttgtccct tccgcctcca tgtcagaaaa gcccgtccaa
      721 gatgaccaga ggctgtcggc atcctgcagc cagaacagcc tagagagcaa gtatgtgttt
      781 tttcggccca ccatccaagt ggagctggag caggaggaca gcaagacagt gaaagagatc
      841 tacattcgag gttggaaaat tgaagaacgg attctgggta ttttctccaa atgtctgccc
      901 cccctcagcc agctgcaggc catcaacttg tggaaggtgg gactgactga aaagaccctg
      961 accgctttca tcgccctttt gcctctttgt tcacccacac tcaggaaggt atctctggag
     1021 gggaacccca taccagagca gtcctttaac aagctaatgg gactggacag cacgatcgtt
     1081 cacttgtctc tgaggaacaa caacatcaac gaccatgggg cacagctcct gggccaggca
     1141 ctgtccacac tgcacagcag caaccggacc cttgtttcac tgaacctggc attcaaccac
     1201 atcggggatg aaggagccgg ctacattgcg gatggcctga ggctgaaccg ctctctcctc
     1261 tggctgtccc tagcgcacaa ccacattcaa gacaagggag cgctgaagct ggccgaggtc
     1321 ctgcgcccct ttgagctgac ccacagggag gtggtggagc ggcgccgcct gctgctggtg
     1381 aaaggaacgc aggagcggtc tcgatcgcct tcctcctccc gacacgggga ctccaaaaca
     1441 gaccgagaga agtctcagaa tctggggatc agcaacgtta ctttggtgga caaggcagaa
     1501 aagatgcagt caatgaaagc ccctcggacc ataggcaaga aaaaggagaa gtcaggggaa
     1561 gttgtaaaga aggaagagaa gttgggaccc gggcagtcac ccacacaagg aacccctaag
     1621 aaagaagatg ccccaaaggc aggcaagggg aaggtgacca tccctgagca gaagataagc
     1681 aagggcaaag cgacgaagac gggggccaaa gagaagcgca gcatcctcct ggagtcagaa
     1741 cagctggttg ttgaagctac agagatggtt aaccctctcc tggagcccgt ggaacaccga
     1801 gatgggaagg tcttcttgcc tgggaacaag gtcctcttgc acctcaacct cctccgaaac
     1861 caaatcacag aggtggggct ggaaggcttc ctcaccgctg tgcaatacca ggttcaggtc
     1921 tccaagtcca agacttcacc caaggccccc ctgggtctgc tgtggctgtc cttggcaaaa
     1981 aactgctttg acccacagtg tccaacacac atcatgattc aagaactgat gttgccaagg
     2041 gaccctgtga aggccaaggt cagggaggag gaggccacag ctacctaggc ctcctacagg
     2101 cagccgctgt ctccttggga aagtatcctg gaccagtaac atagtctctt gctgtgctgt
     2161 tctttgacaa tcactccaga actgtgtgga acatttgggt tcttgagtct gttcatattc
     2221 cctggctaga catggctcca ttgggggatg agctgagctc ctggctaggg ccattgctcc
     2281 gagagtccca gtagcatccc ccaggccatg tcagtgtgca cacagcctta caatgatggg
     2341 ggttagttaa cataattgat ggagggagca ggctttgaac taggacccat tccccagcat
     2401 tctctgatac ttatctccat gtgtctgtct ggttttcaag aggtcagggc tctgctttca
     2461 aagaagaagg cactctggaa agggtatggt atggtatcca atttgcagag caaaggccaa
     2521 acattaaaca tggcatgcca gcaactagaa atcatggaca tccagagtag ggctggctgc
     2581 ctctgctaag aattctggag agcccatgcc agcctacagg gaatctccag ccaaggtaaa
     2641 ggggacatct ccctcatctc tagccctctg ccacctccac cttccagagc tccatcttct
     2701 gcactggctg gtgagtggct ccagagacct ctctgattgc tctaagtcca agtcactgtg
     2761 tcagggtgca ccatggccat ccatggtttt ctcagctatg taccaggtcc ttaaagctgg
     2821 cttcagaccc acacttgctc agctgtcatt tctgacctgt gggaaggagg gaggagggca
     2881 gtgtggtgac catccctttc atgttttgcg gctgacagta ggtacagcag ccatgttcct
     2941 ttgtgtgaag taaccacaat gtccttttct gggccagagt aagttgccca acctttggtg
     3001 agagggtcta cactttggtg agagggcttt gggacaggtg agacctggtg caggatggtg
     3061 cagcatgggc tcttgttgcc ctctacccat tcttggcagc ctcaccctct gtcagtctaa
     3121 gaatcataca accacaatag aagaatattt aacttttctt taaaaaaatc ttaaccatga
     3181 aaggaagaaa ataagagtat acattatttt aacagcaaaa cagtcatttc catatctgta
     3241 ttttatatat tatatatatt tatatatatg tatatataca cctagcacag tgtgtatgtt
     3301 catcgtgggg agtggcgtga ggacagggtg atgaggcaat ggtgctgtgg cccctgggga
     3361 aggaagagcc ctgacttaac tcagggactc cagcaatcca ctccacatct ctctcggggt
     3421 ctgttttgag atccgtacct gctgtatttg tttctatggg gcaggtgggg aagggctggg
     3481 gaaccctgca ggggtgtctc ctgacaacaa gaagggagaa gtggccaagg cttcagaggc
     3541 gggccctgga gcttgacaga gctggagtct gggagacctc cctgccagtg ggacataaac
     3601 aatcatggcc ctgagctggg ctgctgcctg gctctctcta actggttgaa catgctaggg
     3661 acagaaaaaa aaggctgtta tttacaattg caaagataca catacaatag acatttatag
     3721 gaaactaaag gggcaaagag gagagccagg cacctagctg tctcagggcc taggaagaag
     3781 gggaggaaaa aagtgcaatc acacataagc ctcctcctct gacatgcaca cctgagggca
     3841 ctgtgcacac agcacacccc acactggcta tgtggctatg cagggtggag gcctttctgt
     3901 tgtggtcaac atgctcagga gacaaaagcc atggagactt gggctaacag aggaagagac
     3961 actgaactgg actgtctggt ggaaacagac caggcaacac gagggattcc ctggccccgt
     4021 ggcatctttc aaggggaggc ttgggtctcc cagggttgtg ctctgaggca ggccagactc
     4081 tggttgtctg gatgctatgg tcctggtgac acagctgtgt cagtggcact gtcttccagg
     4141 gcgatgtcgg agcctgtggg aagatggcga gggtgagaag ctggctacat ttgagatgtc
     4201 ctttttcatg tccctggatg acttcagcac cagctgtctg tgacaaagct ttctcctcta
     4261 caaactttat tacgcttttt tcacttatac gaaatagaat gtgtgtggaa gcc
//
