LOCUS       NM_001008763            3079 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus leucine rich repeat containing 66 (Lrrc66), mRNA.
ACCESSION   NM_001008763 XM_223356
VERSION     NM_001008763.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1.
            
            On Sep 30, 2022 this sequence version replaced NM_001008763.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: AY383699.1, SRR26360194.86664.1
                                    [ECO:0000331]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-33                JAXUCZ010000014.1  34932981-34933013
            34-501              JAXUCZ010000014.1  34935358-34935825
            502-671             JAXUCZ010000014.1  34949616-34949785
            672-861             JAXUCZ010000014.1  34955087-34955276
            862-3079            JAXUCZ010000014.1  34956829-34959046
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p11"
     gene            1..3079
                     /gene="Lrrc66"
                     /gene_synonym="RGD1306094"
                     /note="leucine rich repeat containing 66"
                     /db_xref="GeneID:289587"
                     /db_xref="RGD:1306094"
     exon            1..33
                     /gene="Lrrc66"
                     /gene_synonym="RGD1306094"
                     /inference="alignment:Splign:2.1.0"
     exon            34..501
                     /gene="Lrrc66"
                     /gene_synonym="RGD1306094"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..2636
                     /gene="Lrrc66"
                     /gene_synonym="RGD1306094"
                     /note="liver regeneration-related protein LRRGT00044;
                     leucine-rich repeat-containing protein 66-like"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 66"
                     /protein_id="NP_001008763.1"
                     /db_xref="GeneID:289587"
                     /db_xref="RGD:1306094"
                     /translation="MKDFYARVTVMVTGLCFVGTVTNPSRKSSLSLHQQDGDLLANWS
                     STRHTSQKTDTVDRNSYFFRVLFQPHTKERHTNHLDRTNHRLSKVTLSCLAHLRALEM
                     LNLGDDVIHSLCLDLSLPSSSRQKRHRSRFRGRHPRLKVLLLQRNQLGPTPKGLWKLK
                     PLCSLDLSFNRRVGIGLSGFHGCLQLKSIYLKNNKILTIHPEAFKGLKKLQVVDLRSS
                     ALTMLVPIVTIALEWPNLELGLADNQWQCNESDANFQNIASVSWGEIWKAVCNTPVEN
                     EKPYVEASQIRISRDIHLPRSPSSDLQSLIQSKAEKPRAGMDVHLSALEKKAQVGYGD
                     LKGIWLQSPMELRDSQGGPVTDRKDDKPPDLALAVCLSVFITFVVAFCLGAFARPYID
                     RLRQQRCLNKRPGSENAYSNEGFHDDVEAAQHVQHQGTDLCQTTHHLNLFENQDPSWG
                     TEAIPHGAVLSERMLGSNGMDPSSQQSPGQFEDSGEARSGDGNMFPNGRVVHPAVHGL
                     PSADAQKPISPGQHHYDVPEESLYDTVAQEYSLLDNAMDRSSVAGCLGTFPNSINSGR
                     DELCPSQPRDVVASFSKTLAHMSTREAEESVERGFPEPLGAMGSQIESSEERQVSNSI
                     RELATQQASFQEVDVEERLAHVYSEALYNDTPSHMPRHSSGHDVASATEEAVQRDASF
                     DPHDDLVTNYESDSDEGSLFTLSSEGSQDTRSLTEEQAFVESGGDSQPLPSRNLGEYK
                     DSVTSAESVEDITSQQTLEKREAQEAHLGNTLISGPDSCVHETHLENDSSPLDPENVP
                     TWTQPPDHKLAHHETLGTFVYGDIGPQSEAVDWLYSLRDLEFPNIDSSPSPPCSDQDP
                     SDPEEHDTK"
     exon            502..671
                     /gene="Lrrc66"
                     /gene_synonym="RGD1306094"
                     /inference="alignment:Splign:2.1.0"
     exon            672..861
                     /gene="Lrrc66"
                     /gene_synonym="RGD1306094"
                     /inference="alignment:Splign:2.1.0"
     exon            862..3079
                     /gene="Lrrc66"
                     /gene_synonym="RGD1306094"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagacagac cagttagaaa ccacctaagg taggcattat gaaagacttc tacgccagag
       61 ttactgtcat ggttacaggt ctttgctttg tgggaacagt gacaaaccca tcaagaaaaa
      121 gcagtctttc cctccatcag caggatgggg atcttctggc aaactggtct tctacaagac
      181 acacgtccca gaaaacagac accgtggaca ggaactccta tttctttaga gttctcttcc
      241 agccgcacac aaaagaacgg cacacaaacc atctggaccg cactaatcat cgcttgtcaa
      301 aagtgaccct cagctgtctc gcgcatttgc gtgctttgga gatgttaaac cttggcgacg
      361 atgttatcca ctccctctgc ctggatctgt ccctgccttc ttcctcacgg caaaagcgcc
      421 acagaagtcg cttccgtggc cgacatcccc ggctaaaggt gctgctactt caaaggaatc
      481 aactcggtcc tactcctaaa ggactgtgga agctgaagcc actgtgcagt ctggatctgt
      541 cattcaacag gagagtcggc attgggctgt ctggttttca tggctgcctg cagctgaaga
      601 gcatctattt aaagaacaac aagatcctca cgattcaccc agaagctttc aaagggctca
      661 aaaaattaca ggtggtagac ctcagaagca gtgcactgac catgcttgta ccaattgtga
      721 ccattgctct agaatggccc aacctggaac ttggcttggc tgataaccag tggcagtgta
      781 atgagagtga cgccaacttc caaaacatcg cctctgtatc ctggggggaa atatggaaag
      841 ccgtctgcaa cacgcctgtg gagaatgaga aaccatatgt ggaggcttcc cagatcagaa
      901 tttccaggga tatacacctt cctcgctctc cttccagtga cttgcagagc ctcatccaga
      961 gcaaagcaga gaagccccgg gcaggaatgg acgtgcacct ttccgctctg gagaagaagg
     1021 cacaggttgg ctatggtgat ctcaaaggga tatggctgca gtccccgatg gagctcagag
     1081 actcccaggg tggccctgtc actgacagaa aggatgacaa acccccagac cttgccctgg
     1141 ccgtctgcct gtcagtgttc atcacatttg tggtggcttt ctgcctgggg gcttttgcaa
     1201 gaccctacat cgacagacta cggcaacaaa gatgcttgaa caaaaggcct ggctcagaga
     1261 atgcctactc aaacgagggt ttccatgacg acgtggaagc tgcccaacat gtacagcacc
     1321 aagggacaga tctatgccaa actacccacc acctaaatct ttttgagaac caggatcctt
     1381 cctgggggac agaggcaatc ccacatggtg ctgtcctatc agaacggatg ctgggaagca
     1441 acgggatgga ccccagtagt cagcagagcc caggacaatt cgaggacagc ggtgaggcaa
     1501 gaagtggaga tggcaacatg tttccaaatg gccgtgtagt ccaccctgca gtccacgggc
     1561 ttccaagcgc tgacgctcag aagccgattt caccagggca gcatcactat gacgttcctg
     1621 aagaatcact ttatgacaca gtggcccagg aatattctct ccttgacaat gcaatggata
     1681 ggtcttctgt tgctggctgt ctgggaactt tccccaactc tatcaatagt ggtcgggatg
     1741 aattgtgccc ttcacagcca agggatgttg tggcttcctt ctccaaaacc ctagcacata
     1801 tgagcactcg agaggctgag gagagtgtgg aaaggggctt ccctgaacct ttgggagcca
     1861 tgggctccca gatagaatct tctgaggaaa ggcaagtgag caattccatt agagagctgg
     1921 ccacacaaca ggcaagcttc caagaagttg atgttgagga aagacttgcc catgtctaca
     1981 gtgaggccct atacaatgac acaccctccc acatgccaag acacagcagt ggccatgatg
     2041 tcgcctctgc tactgaggag gctgtgcaga gagatgcttc ctttgaccct catgatgact
     2101 tggtgaccaa ctacgagtct gattctgacg agggctcttt gtttaccctt agttctgagg
     2161 gttctcagga cacaaggagc ttgactgaag aacaggcatt tgtggagagt ggtggggaca
     2221 gccagcccct cccgagcagg aacttggggg aatacaagga cagtgtgaca tcagcagaaa
     2281 gtgttgaaga catcacgtca caacagactc tagagaagcg tgaagcgcaa gaagctcacc
     2341 tcggaaacac tctcatttct ggtccagact cttgtgtgca tgaaacacat ctggaaaatg
     2401 actctagccc ccttgaccct gagaatgtac caacatggac ccaaccccca gaccataagc
     2461 tagcacacca tgagactcta ggcacatttg tgtatggtga catagggccc cagtctgagg
     2521 cagtagactg gctctactcc cttagagacc tggaattccc aaatatagat agttcaccat
     2581 caccaccatg ttctgatcaa gatccctcag atcctgagga gcatgacacc aaatagaagt
     2641 aaacatggca gccttataag ctgggggata gagcgccatt ggtagagtat gtgctcacaa
     2701 tgcacaaacc cctgggcgca aaccacagca ctggagacat tgggcacact ggcacatact
     2761 gtcagcccag cctttgggag gcagaggcag gaaacaggca tgagactgaa acagctcttg
     2821 cacagcagat gatggaatgt tctggcaaat gtgggctctg ttgctccaac agtcagcttg
     2881 tgagagatgt cagccctacc aagaccccgt ctcccactca gattccagga ccacatcctc
     2941 aactccagtt gcccaaatct gcatggtcat cctggaacct aaaagctata ttttttcttc
     3001 acgaatatgt gctccaaaat tcactatttt agtcaacagt atcacagtgt ccacccagta
     3061 aacccattta cagatttta
//
