LOCUS       NM_001398593             880 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus leucine rich repeat containing 3C (Lrrc3c), mRNA.
ACCESSION   NM_001398593 XM_039087395
VERSION     NM_001398593.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 880)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000010.1.
            
            On Dec 20, 2021 this sequence version replaced XM_039087395.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643295.40567.1,
                                           SRR26643297.35867.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                JAXUCZ010000010.1  84105066-84105140
            76-880              JAXUCZ010000010.1  84105593-84106397
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..880
                     /gene="Lrrc3c"
                     /gene_synonym="RGD1563281"
                     /note="leucine rich repeat containing 3C"
                     /db_xref="GeneID:287668"
                     /db_xref="RGD:1563281"
     exon            1..75
                     /gene="Lrrc3c"
                     /gene_synonym="RGD1563281"
                     /inference="alignment:Splign:2.1.0"
     exon            76..880
                     /gene="Lrrc3c"
                     /gene_synonym="RGD1563281"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..880
                     /gene="Lrrc3c"
                     /gene_synonym="RGD1563281"
                     /note="leucine-rich repeat-containing protein 3C"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 3C
                     precursor"
                     /protein_id="NP_001385522.1"
                     /db_xref="GeneID:287668"
                     /db_xref="RGD:1563281"
                     /translation="MLLLAPRLLPLLLVIGTGRSVSSPQTLPQGCYIAEEAGEQTFRC
                     SRAGLSAVPSGIPNDTRKLYLDANQLASVPAGAFQHLPALEELDLSHNVLVHLSGAAF
                     QGLEATLRHLDLSANQLASVPVAAFVGLQIQVNLSANPWRCDCALQEVLRHVRLAPGS
                     GTGIVCGPEARPDLVGHEFLLLTGEEELCGTGRGGTRRSTDVALLVTMGGWLTLVVAY
                     LIHYVWQNRDETRHPVKRAPPVQPVRSEDSSTLSTVL"
ORIGIN      
        1 taataaatcc ctcttgtgac actagtgcca accagaaccg ctggtgttcg cctggctccc
       61 ttggcagtca tacagattct cctccagtcc gggattatgt ttatctgcga ccatgctcct
      121 actagctcct cgcctcctgc ccctcctgct ggtgataggc acagggcgct ctgtgtccag
      181 cccccagaca ctgccccaag gctgctacat agcagaagaa gccggagaac agacattccg
      241 ctgcagccgg gctggcctga gtgccgtgcc cagcggtatc cccaacgaca cccgaaagct
      301 ttacctggat gccaaccagc tggcatcagt gccagctggc gccttccagc acctgccggc
      361 cctggaggaa ttagacctgt ctcataacgt ccttgttcat ctctcagggg ctgcttttca
      421 gggcctggag gccactctgc gccacctcga cctctctgcc aaccagctag catctgtgcc
      481 tgtggcagcc ttcgtggggc tgcagatcca agtgaacctg tccgccaacc catggcgctg
      541 cgactgtgcc ctacaggaag tgctcaggca cgtgaggtta gccccaggct cggggacagg
      601 cattgtgtgt ggtccagaag cccgaccaga tctcgtggga cacgagttcc ttctgctcac
      661 cggggaggaa gagttgtgtg ggaccgggcg aggtgggacc cgaaggagca cggacgtggc
      721 cctgttagtc accatggggg gctggctgac actggtagtg gcttatctga tccactatgt
      781 gtggcagaac cgggatgaga cgcggcaccc ggtcaagcgg gctcctcccg tgcagcctgt
      841 gcgctcagag gattcctcta cgctcagcac agtgctctga
//
