LOCUS       NM_001399495            1357 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus leucine rich repeat containing 3B (Lrrc3b), mRNA.
ACCESSION   NM_001399495 XM_002728176
VERSION     NM_001399495.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Bennett,M.K., Kulaga,H.M. and Reed,R.R.
  TITLE     Odor-evoked gene regulation and visualization in olfactory receptor
            neurons
  JOURNAL   Mol Cell Neurosci 43 (4), 353-362 (2010)
   PUBMED   20080187
  REMARK    GeneRIF: lrrc3b gene expression in olfactory receptor neurons was
            regulated more than 10-fold by odorant activity.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            On Jan 10, 2022 this sequence version replaced XM_002728176.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BF407179.1, SRR22582416.861799.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               JAXUCZ010000015.1  12404309-12404417
            110-1357            JAXUCZ010000015.1  12480371-12481618
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p16"
     gene            1..1357
                     /gene="Lrrc3b"
                     /gene_synonym="RGD1311897"
                     /note="leucine rich repeat containing 3B"
                     /db_xref="GeneID:305705"
                     /db_xref="RGD:1311897"
     exon            1..109
                     /gene="Lrrc3b"
                     /gene_synonym="RGD1311897"
                     /inference="alignment:Splign:2.1.0"
     exon            110..1357
                     /gene="Lrrc3b"
                     /gene_synonym="RGD1311897"
                     /inference="alignment:Splign:2.1.0"
     CDS             267..1046
                     /gene="Lrrc3b"
                     /gene_synonym="RGD1311897"
                     /note="leucine-rich repeat-containing protein 3B"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 3B
                     precursor"
                     /protein_id="NP_001386424.1"
                     /db_xref="GeneID:305705"
                     /db_xref="RGD:1311897"
                     /translation="MNLVDLWLSRSLSMCLLLQSFVLMILCFHSASMCPKGCLCSSSG
                     GLNVTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFKDLHQLRVLNLSKNGIEF
                     IDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNLKARARIANNPWHCDCTLQQVLRSM
                     ASNHETAHNVICKTSVLDEHAGRPFLNAANDADLCNLPKKTTDYAMLVTMFGWFTMVI
                     SYVVYYVRQNQEDARRHLEYLKSLPSRQKKADEPDDISTVV"
ORIGIN      
        1 gcggccgctg cagccccggc agcgcgcaca cccctaggca tacgcaccaa acgcctcctc
       61 cctgcgccac gaggatggag cagccatccc aatccaggac tggcgcaagg ttcccaagca
      121 aggactggaa taatgaagaa ggctgtgtgc tagctgcatc cgtttgaacc acccaggaag
      181 gaaatccaga gtgtggtcag aggcagaacc cttgcaacac ttggagtgaa tgaggaatgg
      241 actcgtgatt atgcagaggt tccaggatga atctggtcga cctgtggctg tcccgctccc
      301 tctccatgtg tctcctcctc caaagctttg tcctgatgat actgtgtttt cattctgcca
      361 gtatgtgtcc caagggctgc ctttgctctt cctctggggg gttaaatgtc acctgtagca
      421 atgcaaatct caaggaaata cccagagatc tccctcctga aacggttttg ctgtatctgg
      481 actccaatca gatcacatcc atccccaatg agatttttaa ggacctccat caactgagag
      541 ttctcaacct gtccaaaaat ggcatcgagt ttattgatga gcatgcattc aaaggagttg
      601 cagaaaccct gcagaccctg gacttgtctg acaacaggat tcaaagcgtg cacaaaaatg
      661 ccttcaataa tctgaaggcc agggctagga ttgccaacaa cccgtggcat tgtgactgta
      721 ctctccagca agttctgagg agcatggcat ccaatcatga gacagcacac aatgtcattt
      781 gcaagacttc agtgttggat gagcatgctg ggagaccttt cctcaatgct gccaatgatg
      841 ctgacctttg taacctacct aaaaagacta ctgactatgc catgctcgtc accatgtttg
      901 gctggttcac catggtgatc tcttatgtgg tgtactacgt gaggcagaat caggaggatg
      961 cccggagaca cctggaatac ttgaaatccc tgccaagcag gcaaaagaag gcggatgaac
     1021 ctgatgacat tagcactgtg gtatagcaac cacgctggct ggcactggga agggagcttc
     1081 tgcttgtagt aaaataagtg gttcagttct ccctccattg tacaccatta aaactttgta
     1141 tttcagtttc tttggaatca tgtcactgtt gaacttttca caaacaatac aagtctaata
     1201 attttagttt agatgatgtc cccccattaa ttgtgacccc ctggttcctg agtgacaaac
     1261 tctctgaaca ttagttagac ccatctcact atttaataat gaaatttatt tttttaattt
     1321 aaaactgaat aaaagcttaa ctttgaacca tggaaaa
//
