LOCUS       NM_001107991            2350 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus leucine rich repeat containing 38 (Lrrc38), mRNA.
ACCESSION   NM_001107991 XM_001073628 XM_233624
VERSION     NM_001107991.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Yan J and Aldrich RW.
  TITLE     BK potassium channel modulation by leucine-rich repeat-containing
            proteins
  JOURNAL   Proc Natl Acad Sci U S A 109 (20), 7917-7922 (2012)
   PUBMED   22547800
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_233624.4, XM_001073628.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2350
                     /gene="Lrrc38"
                     /gene_synonym="RGD1311416"
                     /note="leucine rich repeat containing 38"
                     /db_xref="GeneID:313681"
                     /db_xref="RGD:1311416"
     exon            1..1036
                     /gene="Lrrc38"
                     /gene_synonym="RGD1311416"
                     /inference="alignment:Splign:2.1.0"
     CDS             394..1290
                     /gene="Lrrc38"
                     /gene_synonym="RGD1311416"
                     /note="leucine-rich repeat-containing protein 38"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 38
                     precursor"
                     /protein_id="NP_001101461.1"
                     /db_xref="GeneID:313681"
                     /db_xref="RGD:1311416"
                     /translation="MSLYAVPRRPTGAFAALGLGSLLVLLGPGRACPTGCACTDPHTV
                     DCRDRGLPSVPDPFPLDVRKLLVAGNRIQQIPEDFFIFHGDLVYLDFRNNSLRSLEEG
                     TFSGSAKLAFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNNLAGVHEAAFESLESLQV
                     LELNGNNLRSLNVAALDALPALRTVRLDGNPWLCDCDFAHLFSWIQENASKLPKGLDA
                     IQCSLPMEERRVALRELSEASFSECKFSLSLTDLFIIIFSGVAVSVAAIISSFFLATV
                     VQCFQRCAPNKDTEDEDDDEDD"
     exon            1037..2350
                     /gene="Lrrc38"
                     /gene_synonym="RGD1311416"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccagacacgc cccatggaaa tcgctccagg gatccgtcac tgaacttagt cttgagcacc
       61 gctggccagg tctgtgcgac aggtcccaat tccccgcccg agtagggtcg cgctgggctc
      121 cctccgcggt ctccacctgt gctttggaat gttccagagg gtcagtttcc tttgcgggtg
      181 aattctgcgc ccagcacctc tcctctgcct cctccctccc cgccgtcccg acaccccggg
      241 tcgttctgtc cccgccgcac tctcatcgcc cccgcgcacc cctgcgcagc ctccccgccc
      301 ggcgccgctg ccctggggct ttcggcgccc gggagtcagg gccccgctgc gtcctccccg
      361 ccgcgagccg agtcctccgg aatccccggg gacatgagtc tctacgctgt cccccgccgc
      421 cccacgggcg cctttgcggc gctggggctc ggtagcctcc tggtgctgct cgggccggga
      481 cgcgcgtgcc ccacgggctg tgcctgcact gacccccaca cggtggactg tcgcgatcgc
      541 gggcttccta gcgtgcccga tcccttcccg ctggacgtgc gcaagctgct agtggccggc
      601 aaccgcatcc agcagatccc cgaggacttc ttcatcttcc atggagatct ggtatatctg
      661 gatttcagga acaactcgct gcgctcgctg gaggagggca cgttcagcgg ctcggccaag
      721 ctggccttcc tggacctgag ctacaacaac ctcacccagc tgggtgccgg cgccttccgc
      781 tcggcgggga ggctggtcaa gctaagcctg gccaacaata acctggccgg tgtacacgag
      841 gccgccttcg agagcctgga gtccttgcag gtgctggaac tcaacggcaa caacctgcgc
      901 agcctcaacg tggcggcttt ggatgcgctg ccggcgctgc gcactgtgcg cctggacggg
      961 aacccctggc tgtgcgactg tgatttcgct cacctcttct cctggattca ggagaacgca
     1021 tccaaactgc ccaaaggcct cgatgccatc cagtgctcac tgcccatgga ggagcggagg
     1081 gtggccctga gggagctgtc cgaagccagt ttcagcgagt gtaagttcag cctgtctctc
     1141 acagacctat tcatcatcat cttctctggg gtggctgtct ccgttgctgc catcatctcc
     1201 agcttcttcc tggccactgt ggtgcagtgt ttccagaggt gcgcccctaa caaggacacg
     1261 gaggatgagg atgatgacga agatgactga gcctcctcct cctcctcctc tttgctttcc
     1321 cacactcaac cagtggcgcc tctccaaggg agactgatgc tgaagacaga tgcatcacat
     1381 cactccaagc agaaaacggg atggagcttg cctagatgca cctgctggga cagccattcc
     1441 cagagcatag aatcagcaga gtagagacgc aggaaggatg gagagattca ctcttaggca
     1501 gagcctgcct cccaggctgg gggtgggggg ggactcctgt gtgtgaagat aatcaagtca
     1561 ggcttcatgg cttacagctt tacaaccctc ccgtgccgaa gagagatctc acagcttctg
     1621 acctcagagg tgtttgtgcc gttcttatta caagctgcac tatggaccac gaaccatctt
     1681 ccccctaaaa agacagtagt gttctcagtg tagattcaag tcaagctcat tctccgtggg
     1741 aacaggaatc cttttcttct atagaagatc cctagcggcc ttgggctgtt agaccaagaa
     1801 caaacaaatg tatttgcaat agacaacgtc tgtctcccct gtgtggctgt gttgatacct
     1861 cacacccaac gtgttgaacg tcgcttgatg ggaaatgacc tgagccagca gcaccaagct
     1921 ggtgggctgg gggctgagac ctgaggcgga agctcacaag aagtccctgg gggcgtttca
     1981 aggtcccact ccttcagggt gttttgaaga ggtccctttg gctatgattg ggtcatgaga
     2041 atggagtcat cctcagtgca tttagcgccc ttataattca gactttggaa acctccctgc
     2101 cccttctaca gggtgaggac ccagtgagca ggtctatgaa ccaggaaggg ggtctctcac
     2161 aggaattcaa ccatactgat ggcccggcct ccaccttcaa gcctcccaaa ctgagaggaa
     2221 taaatgttat ttataaaccc tcgtgtctgt aatttttttt gggagggaga ggaataacag
     2281 ctcaaggata ctaggacacc atcccatctt tagctgaaat gttgccaaaa agtaaaagct
     2341 tagaccttgt
//
