LOCUS       XM_006232238            3605 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus leucine rich repeat containing 31
            (Lrrc31), mRNA.
ACCESSION   XM_006232238
VERSION     XM_006232238.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006232238.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006232238.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3605
                     /gene="Lrrc31"
                     /note="leucine rich repeat containing 31; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 98% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:310256"
                     /db_xref="RGD:1561499"
     CDS             384..1847
                     /gene="Lrrc31"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 31"
                     /protein_id="XP_006232300.2"
                     /db_xref="GeneID:310256"
                     /db_xref="RGD:1561499"
                     /translation="MDLKSNMQESDWFQMRRSRRAADTCLDLNSYGLTAVDTKEAASL
                     LPLLSDLEELDVSWNDFVSGTLHSFTQQTHPVSKLKVLRLSSCRLTTEDVQTLGGALE
                     LIPDLEELSLSWNSQVGGKLPQVLHTFQQGSKIRTLELVDCALTPQDGEFVGHLLPKL
                     QSLEVFDLSNNRNIGSSLDIIAQGLKSTPGLKILKLHSCGLSPKSVRILDGAFAFLDA
                     LRILDLSCNKELGRGFEEVPARLALLKHLEVLDLHQCSLTAEDVTSLTQIVPLLSNLE
                     ELDLSSNRALGGSLESLLSRLRFLPSLKSLLINSCALQRESFTALAEASVYLPALEIL
                     DLSWNKCVGGNLELLQQTLNLSRSLRELRLSSCSLVTEDVALLALVMQTGHLATLQKL
                     DLSYNDGICDAGWAIFCQNLCRLKELTELDISLRPSSSQECGQWFRHLLCAVTQLPVI
                     TGIEMRRWVIPALQEKELDCFTQDRRRDIRFDHGGFQ"
ORIGIN      
        1 ctgacattct tcatccagtt ggttttagga gttacctaca ttgtactggc cagagggatg
       61 aacgctcttc aaacagcaca tctttgaaat gctagactaa gctgctcagt gcacaactca
      121 gtactgaagc tgaggagccc agggctggcc gggagaggaa acccactgac tgcctcagac
      181 tgtagggtgc ggagtctgga catgtggttc aggaccaggg gccactggtt atcccaggct
      241 cccatctccc accttgcgag tttcctaagg gaacttgggg ctgttacctg tctctttccc
      301 cactgtattg tgggtattta tatttttaac tgtttttaga gcaaattctt tgattttatg
      361 tatctatacc tcttgactta gaaatggacc tgaaatccaa tatgcaagaa agcgactggt
      421 tccagatgag gcggagcaga agggctgctg acacatgtct agacctgaac agctacggat
      481 taacagcagt ggatacgaag gaagctgctt cgcttctgcc tctcctctca gacttggaag
      541 aattggacgt ttcctggaac gactttgtca gcggaaccct ccactcgttc actcagcaaa
      601 cacatcctgt cagcaagtta aaagtcctga ggctgagtag ctgcagacta accacagagg
      661 atgttcaaac actaggaggc gctcttgagt tgattcctga ccttgaagaa ctgagtttgt
      721 cctggaacag ccaagtggga ggaaagttgc ctcaggttct ccacacattc caacaaggga
      781 gcaagatccg aacacttgaa cttgtggact gtgccctcac accacaggat ggagagtttg
      841 tgggtcactt gctacctaag cttcagagcc ttgaagtatt tgacctttcc aacaacagaa
      901 atattggcag cagtctagac atcatagcac aaggattaaa aagtactcca ggcctgaaga
      961 tattgaagtt gcattcctgt ggattatccc cgaagagtgt cagaatattg gatggtgcct
     1021 ttgcattctt ggatgcgctg aggatactgg acctctcctg caacaaggaa ctgggtagag
     1081 gctttgagga ggtgcctgct cgactggctt tactgaagca tctggaagtc ctagaccttc
     1141 accagtgctc gctgacagcc gaagacgtga cgtcactgac tcagattgtc cctttactct
     1201 ccaacctgga agaactggat ttgtcgtcca acagagcctt gggcggctcc ttggagagcc
     1261 tactgagcag actccggttt ttaccatcac tcaagtcctt gctgattaac agttgtgctt
     1321 tacagcgtga gagcttcaca gcccttgcgg aagcctccgt gtacctccct gccctggaga
     1381 tactcgacct ttcctggaat aagtgtgttg gtgggaacct ggagctgctt caacaaacac
     1441 taaatttatc aaggtccctt cgagagctgc gactgagcag ctgctccctg gtgacggagg
     1501 acgtggctct cctggcctta gtcatgcaga cagggcattt ggccacgctg cagaagcttg
     1561 acctgagcta caatgacggt atctgtgatg caggatgggc catcttctgc caaaacctct
     1621 gccgtcttaa agagctcact gaactagaca ttagccttcg gccctcaagc tcccaagagt
     1681 gtgggcagtg gtttaggcac ttgctatgtg ctgtaaccca acttcctgtg atcaccggga
     1741 tagagatgag aagatgggtc atcccagccc tccaggaaaa agaactagac tgctttaccc
     1801 aggaccgcag aagggacatc cggtttgacc acggtgggtt tcagtgagct gcttcataag
     1861 caatgaacaa ccccagagga ggagaagaat gcgaacagat cctgccatgc gctgtgctca
     1921 gcgtgtggct gtttagtagc ttgtataggg taagatgttt gtcactatat ctatacgaca
     1981 atggttctca acctagggtc acgacccctt gggggggtca aatgaccctc tcacaggggt
     2041 cacatatcac acattcctgc atatcggata tacacactat gattcacaac agtagaggaa
     2101 ttatagttac aaagtagcag caaaataatt ttatggttga ggggttcacc gcaacatgag
     2161 gaacccgggt taaagggtca aagcactgag gaatttgaga accactggca tatgataacc
     2221 aaatatggag ctggaaagat agctcaggtt agaagtgctt gccacataag cgtgagaacc
     2281 ggaatctgat ctaagtagca cacataaaac acaaggagtg atggtgtgct ttgaatcaca
     2341 atgcagtgga ggcacagaca ggcagatccc tgaggtgccc cagctagctc gactgtcagt
     2401 gagttccagg ctaatgaaag accatgcctc aaaaaccagc tgggtagtgc actagagaag
     2461 caataccaga ggttggtgtc tgctttacac acacacacac acacacacac acacacacac
     2521 acacacacac acaccacata catctgtaca cacacacata tacatataca aacacacctg
     2581 tataagcata cccatttgaa catacatata cctgtacaca tatacactta tacacacaca
     2641 cacacacaat agtgataata aaatgtgagt atatctttag tttctatctt agagcaggat
     2701 tttcatttgt tttaggtgaa taatgagtct actactgttt aggaagccca ccagaatgtt
     2761 gatattgtgg taatgcttct gatttattta ttgttctgag atttttttct gcctggtttc
     2821 cctatatgta aacaaagatt tttcaaaacc tactttagta agggttctta aacgctttga
     2881 tctcctttgt agcctaccac ccaacagagg aaagaaaagg ttaatggggc aagggtgggg
     2941 gtatagacct gtttataaat agtccttggg gggtgattcc agtctgtgtt gtcaggatat
     3001 cagctgttcg gttcacatga accagcagtg gtagctcgat ccactcgcaa acaccattca
     3061 caaatcagcg acagcagttc cgtcagaaga aatcatgaga cctgagtccg tggaagtagc
     3121 aagaagccac tggaatatca ggagtttttt gatctattat tttctctatg aagtcaggac
     3181 aaatgaagat cagcaaagaa ggccaggtga accaatacca cagcgtcatc agcgtagacc
     3241 aacaaagacc agcaaagggt ggcaaggtga accaatgtca tagagtcagt cactgtctgt
     3301 tttacttaga ccctttccaa acatcacgtg tcttctcaag catccactct agcaaaatat
     3361 cacatggtct ttccccaggc tgcttccagc aaaacacaca tgtctgttct cagcaaaaca
     3421 tacccccagc ccatgtttct gggctttgtt tgtttcagca aaactcataa gacagttttc
     3481 aggaaaacat cacatgacac aactgagtct ccaaggaaac cagaaatttc cacttcacct
     3541 atatgttcta tgtattctac aaaggtgtat atgtgtgcat gcacagatgt ctgtgtataa
     3601 ttctg
//
