LOCUS       NM_001109171            3034 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus leucine rich repeat containing 20 (Lrrc20), mRNA.
ACCESSION   NM_001109171 XM_001055761 XM_574754
VERSION     NM_001109171.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3034)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474016.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_574754.2, XM_001055761.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ223562.1, DV214289.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3034
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20q11"
     gene            1..3034
                     /gene="Lrrc20"
                     /gene_synonym="RGD1566140"
                     /note="leucine rich repeat containing 20"
                     /db_xref="GeneID:499430"
                     /db_xref="RGD:1566140"
     exon            1..82
                     /gene="Lrrc20"
                     /gene_synonym="RGD1566140"
                     /inference="alignment:Splign:2.1.0"
     exon            83..227
                     /gene="Lrrc20"
                     /gene_synonym="RGD1566140"
                     /inference="alignment:Splign:2.1.0"
     CDS             146..700
                     /gene="Lrrc20"
                     /gene_synonym="RGD1566140"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 20"
                     /protein_id="NP_001102641.1"
                     /db_xref="GeneID:499430"
                     /db_xref="RGD:1566140"
                     /translation="MLRKMGEAVARVARKVNETVESSSDTLDLADCKLVSFPICIYKV
                     LRNVSDQIHLITLANNELKSLTSKFMTTFSQLRELRLEGNYLYRLPNEVSSLQHLRAI
                     DLSRNQFQDFPEQLTTLPALETINLEENEIVDVPVEKLAAMPALRTINLRLNPLSAEV
                     RVIAPPLIKFDMLMTPEDTRAPLP"
     exon            228..377
                     /gene="Lrrc20"
                     /gene_synonym="RGD1566140"
                     /inference="alignment:Splign:2.1.0"
     exon            378..545
                     /gene="Lrrc20"
                     /gene_synonym="RGD1566140"
                     /inference="alignment:Splign:2.1.0"
     exon            546..3034
                     /gene="Lrrc20"
                     /gene_synonym="RGD1566140"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggctcagaa cttgcaccag gtgccggcgg tcgccgcggg agcgtgagtg ctgggcgcag
       61 ggctctagga cgcgttgtcg ccgcacagac ccctttgtga gtagcagacc ggcctggagg
      121 ctgggagcca aacacccacg tctgcatgct gaggaagatg ggggaggccg tggccagagt
      181 tgcaaggaag gtcaacgaga ctgtggaaag cagctcagat accctggacc tggccgactg
      241 caagcttgtt tctttcccca tctgcatcta caaggtcctg aggaacgtct ctgaccagat
      301 ccacctcatc acgctggcca acaatgaact caagtccctc accagcaagt tcatgaccac
      361 cttcagtcag cttcgagagc tacgcctgga gggcaactac ctctatcgcc tccccaacga
      421 ggtcagcagc ctgcagcacc tcagggccat cgacctgtcc cgaaaccagt ttcaagactt
      481 cccagagcag ctgaccacct tgcctgcgct ggagaccatc aatctggagg aaaacgagat
      541 agtggatgtt ccggtggaga agctggccgc catgccagct ctgcgcacca tcaacctgcg
      601 tctcaacccc ctcagcgccg aggtgcgtgt gattgccccg ccactcatca agtttgatat
      661 gctcatgact ccagaggata cacgggcccc tctgccttag gacatggtcc tgtgctcact
      721 cagcaaggga caaaggatac tggcctgcca ccctgagagg agggaggccc atgggaaacc
      781 aagctaggaa gcggggtggg tgggccaggc agcatacaga gggaggggca cagctaagcc
      841 agggtgggga tagcttagca ctgtaggagc cctggtgctc cagagggagg aggtaggtga
      901 ggctagagcg aggctcaggg cactcacaac tgctgtgccg acttgggtag gtctcttgct
      961 ctctctgagc ttggttactt gggaggagga aaaatagtga caaatctttc ctacatggga
     1021 ctcttgagag gttctgtccc cacaccagga gttggatgcc ctctaagctc acggatgagc
     1081 cttgctggca ttttatggac cttgtgattt gaagccttgt ttctagtggg agagccaggc
     1141 accatcctga ggagaccacc tccgtttaat tatcaccttc tgtggactga acacagcgac
     1201 acctgtcatg ttgcctggcc atcgggctcc ctggactggt tggagcctga accaggagtt
     1261 ggaatgtctg gatactggtt gggccctgca gcaggaatgt ttatgaaaga acccttagac
     1321 atctggccag ggtacagagg ggcagctcca ggcggctcag tctaccttgt cccaagacat
     1381 tgtgtgaaag actttctaca tactccctga gaatgacctg gcatggttag gcattccctg
     1441 cagggccaca ggagaggtgg cccagagaag acaaagccat ttgcacttgt gactgtcacc
     1501 cgaggtcctt aggtgacctc cttcaccatg gccttcctcg catgatctcc ctctaatgac
     1561 aacctggttg ccttgtcctg gcccagtacc accaacctca aggctatcac caaaatgacc
     1621 tgccatcttg atgacctttg cctgtggtct aggggctacc agctgcccca gtatgcccag
     1681 aatggtggca tttcccagga ggtagctggg cccttgcccc ttgataaggt ctgtgcttgg
     1741 ggctatccct aaccccctca atctccgtgt gtctacctcc tcccctgagc agcaggccta
     1801 tcagccgccc ccagtcctgg ctgctctaca cctttgtgga ggactgtgga ggtcccagga
     1861 cacaggcagg ggtaagccac tttgtctcca acattttgct gtttagaact caaactattg
     1921 ttcagagacc caccacagag tttgtctggg tccctgtctc ctcacagtga ctcttggtaa
     1981 ggttcctggc tcttggtaag gttgtcatgg gtaaccatag tgtcacggct gtgtatccta
     2041 aaagaaacct tggccatttc ctctctcatc ccaagaccag tcatccgggt aaggaagtag
     2101 acacaggacc caagcaaggg ctgtgtgcag gccaggctgg actggctcct cccttccacc
     2161 ctctatccct gagttggggg tttcaccttg tcaaggaaga gggttgtaag tgcctgccaa
     2221 ctccaagtgt tgataggcta acaccagctt gctagaaaca cagcctccag gggtgtacat
     2281 gtgtgatcca gcaggggcgg ggggtggggg ttagactgta gcattgtggg ttcgaggcca
     2341 gcctgtgctg tataacgaga gcctgtctca gcacaacaac agcagacaaa gtagaagaag
     2401 agtgtcaggc acagtggtgc cctcttgtaa cccccgtcct ccgaaagtag gagcagaaag
     2461 atcaggagtt ctaggccaac cttggcctag agtaaagggt ccctgggcta tgtgagaccc
     2521 catttcagta aaggagaggg caagtacagt gcacagcctc ccacctcata ctggctgtga
     2581 gtcggagctg tgtttcagca aacactgagg ctgatccttc taggaatgtc agtttgagcg
     2641 tcagcagagg gcctgggcga cctgggcacg tgcagagtga aggctgtacc cctcctccac
     2701 ttccttggat cggagcatat gctcagcctc cccctaactc agcaccggga gaccgctgca
     2761 cctcagatca tgtccccatc gttgtgtcac tcaatggtct acctagtgat gacaggtgac
     2821 ggttagccac gccctgtctt cccatccgac ctctggttat tcctgcatgc caactggggt
     2881 tgttcctgga agtcgttctc tacgctgcct agacattatg atgtggcctg tctagacaag
     2941 cttgggcagt cagaaccctc cagatccagg ctcagagtgt gaagaagccc tgcgctgctt
     3001 cagcctgcaa taaaagacgc tgtgctggtc tcat
//
