LOCUS       NM_001013999            1183 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus leucine rich repeat containing 18 (Lrrc18), mRNA.
ACCESSION   NM_001013999 XM_224634
VERSION     NM_001013999.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Apr 8, 2021 this sequence version replaced NM_001013999.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CV108897.1, CK468913.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-97                JAXUCZ010000016.1  8260694-8260790
            98-194              JAXUCZ010000016.1  8264307-8264403
            195-1183            JAXUCZ010000016.1  8278051-8279039
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p16"
     gene            1..1183
                     /gene="Lrrc18"
                     /gene_synonym="RGD1311738"
                     /note="leucine rich repeat containing 18"
                     /db_xref="GeneID:306278"
                     /db_xref="RGD:1311738"
     exon            1..97
                     /gene="Lrrc18"
                     /gene_synonym="RGD1311738"
                     /inference="alignment:Splign:2.1.0"
     exon            98..194
                     /gene="Lrrc18"
                     /gene_synonym="RGD1311738"
                     /inference="alignment:Splign:2.1.0"
     exon            195..1183
                     /gene="Lrrc18"
                     /gene_synonym="RGD1311738"
                     /inference="alignment:Splign:2.1.0"
     CDS             293..1060
                     /gene="Lrrc18"
                     /gene_synonym="RGD1311738"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 18"
                     /protein_id="NP_001014021.2"
                     /db_xref="GeneID:306278"
                     /db_xref="RGD:1311738"
                     /translation="MAKGGKSPKGKKITLNVAKNCIKITFDGRKRLDLSKMGITTFPK
                     CILRLNEIDELDLSRNMIRKIPDSISKFQNLRWLDLHSNYIDKLPESIGQMTSLLFLN
                     VSNNRLTTNGLPVELNQLKNIRTVNLGLNHLDSVPTTLGALKELHEVGLHDNLLTSIP
                     AGISKLPKLKKLNVKRNPFPKPDESDMFVDSIKRLENLYLVEEKDLCSSCLQKCQQAR
                     DKLNKIRSMAPSAPRKAIFSNLVSPNSTAKESQEEWR"
ORIGIN      
        1 tagatcatcg gctatgagct ccaagaaaga cctatccttt ctgttaccac cagagaaaga
       61 caccattacc aaatggtggt aagacagcca accaaaagct ggtgtcaggt tatgctaatt
      121 aacaccaagt accaagattc ttgttgcctg gagacaaagt ttcacagcga aggagcttaa
      181 ggacaaaaaa gcagagccta ccttctagca gtttcatgtg acttcttcct caaacccatc
      241 accatcagct cgggaaaaac attcttcaaa tacactccca tacttagaga ccatggccaa
      301 gggcgggaaa agccccaagg gcaaaaagat cacccttaat gtggcaaaga attgtatcaa
      361 aatcacattc gatgggagaa agcgtcttga tctgagcaag atgggaatca ccaccttccc
      421 caagtgtatc ttacggctca atgagataga tgagctcgat cttagccgga atatgatcag
      481 aaaaattccc gactccatct ccaagttcca gaatctgcga tggctcgacc tgcacagtaa
      541 ctatattgac aaactccccg agtccattgg ccagatgacc tccctgctct tcctcaatgt
      601 cagtaacaac aggctgacca ccaacgggct acccgtggag ctgaaccagc tcaagaacat
      661 ccgcaccgtg aatctgggcc ttaaccacct ggacagcgtg cccaccacac tgggggcact
      721 gaaggagctc catgaggtgg ggctacacga caatctgctg acctctatcc ctgccggcat
      781 ctccaagctt cccaaactga agaagctcaa cgtaaagagg aaccccttcc caaaaccaga
      841 tgagtcagac atgtttgtag actccatcaa aaggctagaa aacctctatc tggtggaaga
      901 gaaggatctg tgttcctctt gcctgcaaaa atgccaacag gccagggaca agttgaacaa
      961 aatcaggagc atggccccct ctgcaccgag aaaggccatc ttttccaatt tggtttcacc
     1021 caactcaaca gccaaggaat cccaggaaga atggaggtga cctgggaccc tgaggcagga
     1081 gggagaaagg aggggagatg aggaagtggg ctgcacccaa aggagagggc tcttgtatta
     1141 ctgtgggagc ctttccatcc aagccataaa acactattcc cta
//
