LOCUS       NM_001109483            1496 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus leucine rich repeat protein 1 (Lrr1), mRNA.
ACCESSION   NM_001109483 XM_001062589
VERSION     NM_001109483.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473947.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001062589.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132263,
                              SAMD00132294 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q24"
     gene            1..1496
                     /gene="Lrr1"
                     /gene_synonym="Ppil5"
                     /note="leucine rich repeat protein 1"
                     /db_xref="GeneID:685860"
                     /db_xref="RGD:1589026"
     exon            1..242
                     /gene="Lrr1"
                     /gene_synonym="Ppil5"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1304
                     /gene="Lrr1"
                     /gene_synonym="Ppil5"
                     /note="peptidylprolyl isomerase-like 5; peptidylprolyl
                     isomerase (cyclophilin) like 5"
                     /codon_start=1
                     /product="leucine-rich repeat protein 1"
                     /protein_id="NP_001102953.1"
                     /db_xref="GeneID:685860"
                     /db_xref="RGD:1589026"
                     /translation="MRLPCEVEVRSCHLPTLGLKSRGKGVRAVVSLCQAPSKNELQPG
                     ARTETSGCACLLVSTMKDRQGTRYRLRENIEQLFTKFVDEGKATVRLKEPPVDICLSK
                     ANPGNLKTFLSAMRLAHRGSDVNTPLSTLKPVKTSEFEKFKTKMIITSKKDYPLSKNF
                     PYSLEHLQASHCRLARVDMRMLCLKSLTKLDLSHNCIKKLPATIGDLTHLQELNLSDN
                     QLESFSVPLCKSTLQKSLQSLDLSKNKIKALPVQFCQFRELTNLNLNDNELIHLPFKI
                     GRLTNLRFLSAARNKLRNLPCEFKMLSLEYLDLFGNTFEKPEVLPIINLQVPLTLLEA
                     CEQAVLSYRIPYGPDIIPYHLCQDLDTAKTCVCGRFCLQSFIQGTTTMNLHSLAHTVV
                     LIDTMGRMEAPIISYFCSLTCFVNSSDMLK"
     exon            243..341
                     /gene="Lrr1"
                     /gene_synonym="Ppil5"
                     /inference="alignment:Splign:2.1.0"
     exon            342..1063
                     /gene="Lrr1"
                     /gene_synonym="Ppil5"
                     /inference="alignment:Splign:2.1.0"
     exon            1064..1496
                     /gene="Lrr1"
                     /gene_synonym="Ppil5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagcctgaag gacctgaagg caagctagct gcaagatgag gcttccctgc gaggttgagg
       61 tccgtagctg tcacttgcca accttgggac tcaagagccg aggaaagggc gtgcgagcgg
      121 tggtgagcct gtgccaggcc ccgagcaaga atgagctgca gcctggagca aggacagaga
      181 ccagcggctg cgcctgcctg ctagtctcca ccatgaagga caggcaagga acccgctacc
      241 ggctaagaga gaatattgag cagctcttca ccaaatttgt ggacgaaggg aaagccactg
      301 tccggttaaa ggagcctcct gtggacatct gtctgagtaa ggccaatcct ggcaatttaa
      361 agacattcct ttcagctatg agactggctc atagaggctc tgatgtgaac acaccacttt
      421 caacactaaa gccagtgaag acttcagaat ttgaaaaatt taaaaccaaa atgattatca
      481 catccaaaaa ggattatcct ctaagcaaga actttccata ttctctggaa catcttcagg
      541 cttctcactg taggcttgcc cgagttgata tgcgtatgct gtgcttaaaa agtcttacga
      601 agttagacct gagtcacaac tgtataaaaa aacttccagc tacaattgga gacctcaccc
      661 accttcaaga gcttaacctt agtgacaatc agctggagtc gtttagtgtg cccttgtgta
      721 aatccacact tcagaagtca cttcagagtt tggatctcag caagaacaaa atcaaagcac
      781 tccctgtgca gttttgtcaa ttccgggaac ttactaactt aaaccttaat gataatgaat
      841 tgattcacct tcccttcaag ataggacggt taacaaacct tcgttttcta tcagcagctc
      901 gaaacaaact tagaaatcta ccttgtgaat ttaaaatgtt atccctggaa tacttggacc
      961 tttttgggaa tacttttgaa aaaccagaag tccttccaat cataaatctt caagtaccat
     1021 taactttact ggaagcttgt gaacaagccg tgctatccta taggatacca tatggccctg
     1081 atataattcc ttaccacctt tgccaagatt tggatactgc caaaacctgt gtctgtggaa
     1141 gattttgtct acaatctttc attcaaggaa cgactacaat gaatctgcac tctcttgccc
     1201 acactgtggt cttaatagat actatgggta gaatggaagc tcctattatc tcttactttt
     1261 gttctctaac ctgttttgta aattcctctg atatgttaaa gtaattagtg tgataagaga
     1321 aaggtttcta gatgtatatc aattgaatat ttatttgtgc tttagcaata ataaatttta
     1381 aaaaggaaag ttttttgtgt attttcacag taagaaaata tattatgtta gcattttcaa
     1441 tcatttgact ctggaatttt aatttaataa aaggtgaatt taattttagg agtgga
//
