LOCUS       NM_001106217            3273 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus LDL receptor related protein 11 (Lrp11), mRNA.
ACCESSION   NM_001106217 XM_001068295 XM_238072
VERSION     NM_001106217.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3273)
  AUTHORS   Xu,J., Cai,R., Lu,L., Duan,C., Tao,X., Chen,D., Liu,Y., Wang,X.,
            Cao,M. and Chen,Y.
  TITLE     Genetic regulatory network analysis reveals that low density
            lipoprotein receptor-related protein 11 is involved in stress
            responses in mice
  JOURNAL   Psychiatry Res 220 (3), 1131-1137 (2014)
   PUBMED   25262641
REFERENCE   2  (bases 1 to 3273)
  AUTHORS   Xiao,K., McClatchy,D.B., Shukla,A.K., Zhao,Y., Chen,M.,
            Shenoy,S.K., Yates,J.R. 3rd and Lefkowitz,R.J.
  TITLE     Functional specialization of beta-arrestin interactions revealed by
            proteomic analysis
  JOURNAL   Proc Natl Acad Sci U S A 104 (29), 12011-12016 (2007)
   PUBMED   17620599
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jun 1, 2021 this sequence version replaced NM_001106217.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN16418988,
                              SAMN17050746 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-801               JAXUCZ010000001.1  3899995-3900795
            802-962             JAXUCZ010000001.1  3906525-3906685
            963-1104            JAXUCZ010000001.1  3909746-3909887
            1105-1230           JAXUCZ010000001.1  3914733-3914858
            1231-1407           JAXUCZ010000001.1  3917743-3917919
            1408-1500           JAXUCZ010000001.1  3920623-3920715
            1501-3273           JAXUCZ010000001.1  3926741-3928513
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..3273
                     /gene="Lrp11"
                     /note="LDL receptor related protein 11"
                     /db_xref="GeneID:292462"
                     /db_xref="RGD:1308602"
     exon            1..801
                     /gene="Lrp11"
                     /inference="alignment:Splign:2.1.0"
     CDS             243..1655
                     /gene="Lrp11"
                     /note="low-density lipoprotein receptor-related protein
                     11"
                     /codon_start=1
                     /product="low-density lipoprotein receptor-related protein
                     11 precursor"
                     /protein_id="NP_001099687.2"
                     /db_xref="GeneID:292462"
                     /db_xref="RGD:1308602"
                     /translation="MAARGGPGPGSRHRALRGLLLLCLWLPGGRPGEPAAPPSGVDRL
                     LQDFRRQLQRARPREELEPELLGGPQEDCPGAGGTAVYRAVSDTIIRTQDSIAAGASF
                     LRAPGTVRGWRQCVAACCSEPSCSVAVVQLPRGPSVPSPVPAPRCYLFNCTARGRSVC
                     KFAPLRGYRTYTLSRAGDAAGISPGPGEDEPPVSRAGKDVVLRLPTDGVVLDGRESTD
                     DHAIVLYEWTLQQGDPSSVDMKVPQPGTLKLSHLKEGAYVFQLTVTDSVGQRSSDNVS
                     VTVLPRLRSTGGCSSACSRYHFFCDNGCCIDIALACDGVRQCPDGSDEDFCQNLATSA
                     QPGATGLNEGEGDPWLEKSQKATTHNQPATVSHPEKRIQPTQKAPESQINPVQPDSNS
                     SGKNQEEKYDLKSKSDQARGEHPAPEAGAVLPLALGLAITALLLLMVTCRLRLVKQKL
                     KKARPITSEESDYLINGMYL"
     exon            802..962
                     /gene="Lrp11"
                     /inference="alignment:Splign:2.1.0"
     exon            963..1104
                     /gene="Lrp11"
                     /inference="alignment:Splign:2.1.0"
     exon            1105..1230
                     /gene="Lrp11"
                     /inference="alignment:Splign:2.1.0"
     exon            1231..1407
                     /gene="Lrp11"
                     /inference="alignment:Splign:2.1.0"
     exon            1408..1500
                     /gene="Lrp11"
                     /inference="alignment:Splign:2.1.0"
     exon            1501..3273
                     /gene="Lrp11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgccgcagc cgctgtcctc acgccggtgc tgatccacgt aaaggccgct cgtcgccccg
       61 gtgcgcttcc gcggccggag cgaagatagg ggcaccgaaa gcccacagcc tggtagaagg
      121 gccagggcgg cgccaagtcc gggtgaatcc ggcccgcgat gcctctcgaa gccggcacgc
      181 tcaccgcttc cgtgaagcag tcaggccccg gggccgccga gctctgaggc cgcgctcgtg
      241 ccatggccgc ccggggagga ccgggcccgg gctcccggca ccgcgcgctc cgcgggctgc
      301 tgctgctctg cctctggctg cccggcggcc ggcccgggga gcccgccgct ccgccgtccg
      361 gagtggatag gctgcttcaa gactttcgcc gacagctgca gcgggcacgg cctcgcgagg
      421 agctggagcc ggagctgctg ggcggcccgc aggaggattg ccccggtgcg ggcggtacgg
      481 cggtctaccg ggcggtgtcc gataccatca tccgcaccca ggactccatc gcggcgggag
      541 ccagcttcct gcgcgcaccc gggaccgtgc ggggctggcg gcagtgcgtg gcggcctgct
      601 gctccgagcc gagctgctcg gtggcggtgg tgcagctgcc ccgggggccg agcgtgccct
      661 cacccgtgcc ggcgcctcgc tgctacctgt ttaactgcac agcccgcggc cgcagcgtct
      721 gcaagttcgc gccgctccgc gggtaccgca cttacaccct cagtcgcgcc ggggacgccg
      781 ccgggatctc gcccgggcca ggtgaggacg agcctccagt tagcagggct gggaaggatg
      841 tggttttgcg tctgcccaca gacggggtag ttctggatgg ccgagaaagc acagacgacc
      901 acgccattgt cctttatgag tggacgctgc agcagggtga cccgtcgtca gtggacatga
      961 aggtgcctca gccaggaacc ctgaagctgt cccacctgaa ggaaggagcc tacgtcttcc
     1021 agctgactgt gactgactcc gtgggtcaga gaagctccga caatgtatct gtgactgtgc
     1081 ttcccaggct ccgctccacg ggaggatgct ccagtgcttg ctcgcgatac catttcttct
     1141 gtgacaatgg ctgctgcatt gacatcgcct tggcgtgtga tggcgtgagg cagtgtccag
     1201 acggttctga cgaagacttc tgtcaaaact tggctacttc tgcccagcca ggagccacag
     1261 gattaaatga aggtgaagga gacccctggt tggagaaatc ccagaaagcc actacccaca
     1321 accaaccagc tactgtatcc cacccagaga agaggatcca gcccacccag aaggcgccag
     1381 agagtcagat caaccctgtc cagccagaca gtaattcctc aggaaagaat caagaagaaa
     1441 aatacgatct caagtctaag agtgaccaag cacgagggga gcacccagcc ccagaagcag
     1501 gtgcagtgct gcccctggca ctgggtctgg ccatcactgc tttgttactt ctcatggtga
     1561 catgccgact ccgactggtg aagcagaaac ttaagaaagc ccgtcccatt acatctgagg
     1621 aatccgacta cctcatcaat gggatgtatc tgtaataaag ttatttgagc ggctgggggc
     1681 agggatgggc accacttacg atctgttctt tgggttctat cattaagaca ctctgttttt
     1741 gaactgtgct agaagacggt gcaaacacaa gccttggttt atcctgaaat cgttttcctg
     1801 ggatggacag tgtcttaaag ggtagagagg aactcgtgag atggaagctt gtttgctgag
     1861 acagagagca cgtcacgagg tgacagaggg aagtcctgcc tttcatttgt gaggtgccaa
     1921 ctgctggccc ctagcaactt cccttgtctt ctggccctct tctccactga gttctcatga
     1981 gctccacttt cctttcctct gccaaatacc tctgagaagg gaccttaggt gaatttacac
     2041 tcagtgagac gttaccaatg gcatgtctgg atgctataaa catcctgaat acctcagcaa
     2101 tgtcctacag tgggggaata tggcttctcc accctgaccc accctatgct tctgacatca
     2161 gaccatggta gtagctacca catctggctg atcttggaag aatccctttt ggttaggggc
     2221 gactgtaggt ggtcatggaa agagagcaag ctggcagcaa aggagaggac ctggcaggca
     2281 aaagcaaata gaatcctggc catgggatat gtgaggacaa tctgcacagt gctgcttctc
     2341 ggtgtggagt agtgtgtgca aattatcaat ccaaacggca atgtctgggt gtttgtgaaa
     2401 gtgtcaccaa gtcccggtgt cacaggcttt tcaatgggat aagccagagg cttcccttca
     2461 tgtgttctgc agggcaggag ggacccagga gcctgtttgt gctaggcaat cactctacca
     2521 ctgatctata cccctgccct caccattctt catgttatta aaatgttaca acgtacaatc
     2581 agctaatgtc aggatgtatt tacagagcag gaagcacttt tgcacaaatg cgcctttgca
     2641 ggaaactagc atccatttag catctttaag tttgtagaca gtaaaggtag actttcctgt
     2701 cgcccactca gtgccaggtt atgcactcta gaggtcactc tgaggggact gcacagtgtg
     2761 gtgcccattt ataatcacaa tgttcctagt tctttaccct aagtggcaaa cattacaaaa
     2821 cactgaaaaa caccgtagtc tcgtagtctc gttactttag actcaatgta aagtaggtgg
     2881 cccctttaac aaggggtttg attttggtga gggaatataa cctattgaaa tgtattaata
     2941 aaagggtagt tttagaaaaa caaatgtttg cttttgtctc tcgagactct aactctagcc
     3001 ttttctgact gtttagagct gagcaataga gatgaacggt gtgagtgaac tcacgtacac
     3061 tctgtgatga tgtccggctc acttttatag aggtcaccta tagccatacc cagtgaatag
     3121 aaactgataa ggcatgtttc tttctgcaca tcttttatat aaaaagacgc taactacaat
     3181 ctagtattgc ttttgttttg aagtacttga gaaaagatgc cttgtatgtt ccagtccttt
     3241 aataaactat tttattctta tgcctttaaa aaa
//
