LOCUS       NM_001106494            2488 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus lysophosphatidylcholine acyltransferase 4
            (Lpcat4), mRNA.
ACCESSION   NM_001106494 XM_001080478 XM_215783
VERSION     NM_001106494.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Cao J, Shan D, Revett T, Li D, Wu L, Liu W, Tobin JF and Gimeno RE.
  TITLE     Molecular identification of a novel mammalian brain isoform of
            acyl-CoA:lysophospholipid acyltransferase with prominent
            ethanolamine lysophospholipid acylating activity, LPEAT2
  JOURNAL   J Biol Chem 283 (27), 19049-19057 (2008)
   PUBMED   18458083
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473949.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001080478.1, XM_215783.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..2488
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /note="lysophosphatidylcholine acyltransferase 4"
                     /db_xref="GeneID:296048"
                     /db_xref="RGD:1311177"
     exon            1..590
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     CDS             477..2045
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /EC_number="2.3.1.51"
                     /note="1-acylglycerol-3-phosphate O-acyltransferase 7
                     (lysophosphatidic acid acyltransferase, eta)"
                     /codon_start=1
                     /product="lysophospholipid acyltransferase LPCAT4"
                     /protein_id="NP_001099964.1"
                     /db_xref="GeneID:296048"
                     /db_xref="RGD:1311177"
                     /translation="MSQGSSGAWAPLDPTSGSSASPNPFVHELHLSGLQRVKFCLLGV
                     LLAPIRVLLAFIVLFLLWPFAWLQVAGLTEEQLQEPITGWRKTVCHNGVLGLSRLLFF
                     LLGFLRIRVRGQRASRLEAPVLVAAPHSTFFDPIVLLPCDLPKVVSRAENLSVPVIGA
                     LLRFNQAILVSRHDPASRRRVVEEVRRRATSGGKWPQVLFFPEGTCSNKKALLKFKPG
                     AFIAGVPVQPVLIRYPNSLDTTSWAWRGPGVLKVLWLTASQPCSIVDVEFLPVYQPSP
                     EESKDPTLYANNVQRVMAQALGIPATECEFVGSLPVIVVGQLKVALEPQLWELGKVLQ
                     KAGLSPGFVDMGAEPGRSRMISQEAFAQQLQLSDPQTVAGAFRYFQQDAKGLVDFRNV
                     ALALAALDGGRSLEELTRLAFELFAEEQAEEPDRLLYKDGFSTILHLLLGSPRPAAMT
                     LHAELCRSGCSQGLSLCQFQNFSLHDPLYSKLFSAYLRPPHKPRSTSQIPNASSSPTA
                     LANGTVQAPKQKGD"
     exon            591..733
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            734..954
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            955..1067
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1128
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1129..1187
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1188..1222
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1223..1277
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1278..1360
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1361..1486
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1487..1619
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1620..1718
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1719..1875
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
     exon            1876..2488
                     /gene="Lpcat4"
                     /gene_synonym="Agpat7; RGD1311177"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcggcggga acagaggtgc ccagcctcct tccgcagctg cgggcctccg caacctgtct
       61 tgacacgggg ctccacccag tctgcgctcg cagggtggcc gcagcatccg gaaggtgacc
      121 agggcgctcg cttgcgcgcc cacttctctg tcctgctccc agcctgagac cctcggaaag
      181 gggcagccag gtcctcgggg cgccgcactc cgaatggcgc gaggggccgc ggagaacgcg
      241 actgagcggg gacgccggag agccgcaagc cccgccccgc ggccggcgcc ctgacaacgc
      301 gagcggcccg ggcggcgccg ccgctctccg cccctcggcc ggcaccaggc ggggctggga
      361 ccagagcgct gccgctgcca ctgccgcacg agtggtgctg ctctgcagag ccggaccggg
      421 agcggggccc gggccgggag cggggggccg cggccctcgc tctaccttct cccaccatga
      481 gccagggaag ttctggggcc tgggcccccc tcgatcccac ctctgggtcc tctgcctctc
      541 caaacccgtt cgtgcatgag ttacacctct ccggcctcca gagggttaag ttctgcctcc
      601 tgggggtact gctggcccca atccgagtac ttctagcttt tattgtcctc tttctcctct
      661 ggcccttcgc atggctccaa gtagcaggtc tcactgagga gcagcttcag gaaccaatta
      721 caggatggag gaagactgta tgccacaacg gcgttcttgg tctgagccgc ctgctatttt
      781 tcctgcttgg cttccttcgg atccgtgttc ggggtcaaag ggcctctcgt cttgaagccc
      841 ctgtcctggt tgctgccccc cactcaactt tctttgaccc aattgttctg ctaccctgtg
      901 acctgcccaa ggttgtatcc cgagctgaga atctttctgt gcctgtcatc ggagcccttc
      961 ttcgatttaa tcaagccatc ctagtatccc ggcatgaccc agcctctcgt cgcagagtgg
     1021 ttgaggaggt cagaaggcgg gcgacctcgg gaggcaagtg gcctcaggta ctattttttc
     1081 ctgaaggcac ctgttccaac aagaaggctc tgctgaagtt caaaccagga gccttcatcg
     1141 ctggggtgcc cgtgcagcct gtcctcatcc gataccccaa cagtctggac accaccagct
     1201 gggcgtggag gggccctggc gtactcaaag tcctctggct cacagcctct cagccctgca
     1261 gcatcgtgga tgtagagttc ctccccgtct atcagcccag cccagaggag agtaaggacc
     1321 ccacccttta tgccaacaac gtccagcgag tcatggcaca ggccctgggc attccggcta
     1381 ctgagtgtga gttcgtaggg agcttacctg tgatcgtggt gggccagctg aaggtagcgc
     1441 tggaaccgca gctctgggag ctgggaaagg tgctacagaa ggccgggctg tcccctggct
     1501 ttgtggacat gggggcagag ccaggccgga gtcgaatgat cagccaagag gcatttgccc
     1561 agcagctcca gctctcggat ccccagacag tggctggtgc cttccgctac ttccagcagg
     1621 atgccaaggg tttggtggac tttcggaatg tggccctggc actagcagcc ctggatgggg
     1681 gcaggagcct ggaggagctg actcgcctgg cctttgagct ctttgctgaa gagcaggcag
     1741 aagaacctga ccgtctgctg tacaaagatg gcttcagcac catcctgcac ctgttgctgg
     1801 gttcaccacg ccctgctgcc atgactttgc atgccgagct gtgccggtct ggatgcagcc
     1861 agggcctctc cctctgtcaa ttccagaact tctctctcca tgaccctctg tacagcaagc
     1921 ttttcagcgc ctacctacgc cccccacaca agcctcgaag cacctcccag ataccaaatg
     1981 cctcatccag ccccactgcc ctggccaacg ggaccgtgca ggcccccaag cagaagggtg
     2041 actgagcgcc tcagcctccc actctttcct cagctcaaac ccagccctgc tctcaggaca
     2101 gcaccagagg cctaccctat gcctcaaccc cacctctgct cctgtttgat tcttttggtc
     2161 attttttttt tttaagttta ttttcatttt ccgtttggtg gggtcttttg taaaagacta
     2221 ttttatatat aaatataaat atatatctat ttaaaaaaaa aagcctgaag cttggtcccg
     2281 agggtggaat cattagttgt gaaggaaaga gatgaatggt tggttgccag atttccattg
     2341 gaatttccaa aaaaactcta aagattggtc ttggccatac ctgaattctc tcattcacaa
     2401 atggacctgg gatgttaact ctgtggaagt catacagtga tttttgtatc tgcccctcct
     2461 gttaccacct actaaatatg cacatctt
//
