LOCUS       NM_001025631            2166 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus lysophosphatidylcholine acyltransferase 2b
            (Lpcat2b), mRNA.
ACCESSION   NM_001025631
VERSION     NM_001025631.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097476.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097476.1, CV113262.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..2166
                     /gene="Lpcat2b"
                     /gene_synonym="Aytl1b; Lpcat2bp; RGD1310837"
                     /note="lysophosphatidylcholine acyltransferase 2b"
                     /db_xref="GeneID:289439"
                     /db_xref="RGD:1310837"
     exon            1..382
                     /gene="Lpcat2b"
                     /gene_synonym="Aytl1b; Lpcat2bp; RGD1310837"
                     /inference="alignment:Splign:2.1.0"
     exon            383..2145
                     /gene="Lpcat2b"
                     /gene_synonym="Aytl1b; Lpcat2bp; RGD1310837"
                     /inference="alignment:Splign:2.1.0"
     CDS             491..2044
                     /gene="Lpcat2b"
                     /gene_synonym="Aytl1b; Lpcat2bp; RGD1310837"
                     /note="lysophosphatidylcholine acyltransferase 2-B;
                     acyltransferase-like 1-B; acyltransferase like 1B"
                     /codon_start=1
                     /product="lysophosphatidylcholine acyltransferase 2B"
                     /protein_id="NP_001020802.1"
                     /db_xref="GeneID:289439"
                     /db_xref="RGD:1310837"
                     /translation="MAHQTQRRDTADTMTEVEVWDSRTAQEVNKSLYPPAVTNPFTHH
                     TQLSAWQLACSIFLGTVLVPVRVSCIVFLFLLLWPVALLSTINLPIQPTEPVKSWRKH
                     LIKPVFIFLLRLAFFCAGFLIKVKGKKATREEAPIFVVAPHSTFFDAIAVIVAGLPSV
                     VSDTQHVRIPLVGQCILLTQPVLVRREDPNSRKTTRNEILSRVKSKMKWPQILIFPEG
                     LCTNRSCLVTFKLGAFSPGVPVQPVLLRYPNTLDTVTWTWHGFSGFQVCMLTLSQPFT
                     RMEVEFMPVYIPNEDEKKDPILFANTVRINMANALKLPVTDHSFEDCKLMISAGALRL
                     PMEAGLVEFTKISQKLKLDWDNIHTHLDKYASVAVSSKGGKIGIEEFSRYLKLPISEP
                     LRQLFSLFDRNQDGTIDFREYVIGLTVLCNPANTEKILQMSFKLFDLDEDGYITEQEL
                     TTMLRAAFGVPDLDVSTLFQQMAGKDSAQVSYRTFRRFALKHPAYAKLFHSYIDLQAA
                     YIYSLPGEV"
ORIGIN      
        1 gaccaaacta aggatgtgag agcaagtttt aacctgtaac ttctgccgat tccccctttc
       61 ataatgtcgg cacctggaag tgaccttcca ctgagaccac accctgctta tcaagctttg
      121 gtgaccatag tgcttcctgg acggctaact tgatacaagt caacagatgt gaacttgggg
      181 accaaaacag tcactttcac tctggggaaa gggattcaga gtaccaatta gtaaacacgg
      241 caggaatcct tggtgcagca tgatccagat tacgagtgct tccagatctt gaagacagcc
      301 tagttcacac tataactggg ctctgcgact tcccaaggac agcagataag aagggactca
      361 tcctggagac catgatgaca cagtagagca tcatttccta ttaaccaaca attcgctgta
      421 agtgtgctaa ttacatgcaa atgaaatagc tgcggagaaa ggaagagaca gacgctgaga
      481 agcagacttc atggctcatc aaacccaacg cagagatacc gcagacacta tgacggaggt
      541 ggaggtgtgg gacagcagga ctgcacagga ggtgaataag tctttatatc cgccggcagt
      601 gaccaacccc ttcactcacc acacgcagct gagtgcttgg cagttggcct gcagcatctt
      661 cctggggact gtgctggtac ccgtgcgggt gtcctgcatt gtcttcctct tcctcctcct
      721 ctggccagtg gccctactct ccaccattaa cttgcctatt caacctaccg aacccgtgaa
      781 gagttggagg aaacatttga taaagccggt cttcatattc ttgctccgtt tggcgttctt
      841 ttgtgccggg ttcctaatta aggtcaaagg gaaaaaggcc accagagagg aggcccccat
      901 cttcgtcgtc gcaccacact ccaccttctt tgatgccatc gccgttattg tggcggggct
      961 cccttcagtg gtctctgata cccagcacgt gcgcatccca ttggttgggc aatgcatcct
     1021 tttaactcag cctgtgcttg tgcgacgaga agacccgaat tctagaaaga ctacccggaa
     1081 tgagatcctc tcgcgggtga aatctaaaat gaagtggcca cagattctga tttttccaga
     1141 aggattgtgc accaaccgct cctgtcttgt cacttttaaa ctaggagcct tctccccagg
     1201 tgtccctgtg caacccgtac tgcttaggta ccccaacacc ctggacaccg tgacctggac
     1261 gtggcatggg ttctcgggct tccaggtatg tatgctcacc ctgagtcagc ccttcactag
     1321 aatggaagtt gagttcatgc ctgtttacat cccaaatgaa gacgaaaaga aagaccccat
     1381 cctttttgcc aacacagtcc gaatcaacat ggcaaacgct ttgaagctgc cggtaacgga
     1441 tcacagtttc gaagattgca aactgatgat ctctgctggt gcccttcggc tacccatgga
     1501 agctggcctg gtggaattca caaaaatcag tcagaaattg aaattagatt gggacaacat
     1561 ccacacgcac ttggacaagt acgcttcggt tgcagtctcc tccaaaggag gcaagattgg
     1621 gatcgaagag ttctcaagat acttaaaact ccccatttca gagcccctga gacagctttt
     1681 ctccctcttt gataggaatc aggacggcac catagacttc cgagagtatg tgataggtct
     1741 aaccgtcctg tgcaacccag ccaacacaga gaagattctg caaatgtcat ttaagctttt
     1801 tgatctcgac gaggatggtt atataacaga acaggagctg acaaccatgc tccgggcagc
     1861 tttcggagtg ccagacctag atgtctccac actcttccag cagatggctg gcaaggattc
     1921 agctcaggtt tcctacagga cttttaggag gtttgccctg aagcatccag catacgccaa
     1981 gctatttcac tcatacatag acctccaggc ggcctatata tactcattac cgggagaggt
     2041 ataaatgttt ccctaatatc gaggtgttcg aggagtcctt ggaaacaggg aaagaacttt
     2101 taggtggaaa tgacgaacta aataaagatt atcctttgag gaaaaaaaaa aaaaaaaaaa
     2161 aaaaaa
//
