LOCUS       NM_001191585            2711 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus LON peptidase N-terminal domain and ring finger 3
            (Lonrf3), mRNA.
ACCESSION   NM_001191585 XM_002730179
VERSION     NM_001191585.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Jul 17, 2010 this sequence version replaced XM_002730179.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.32914.1,
                                           SRR26643293.33037.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-965               JAXUCZ010000021.1  120431031-120431995
            966-1084            JAXUCZ010000021.1  120434725-120434843
            1085-1207           JAXUCZ010000021.1  120438006-120438128
            1208-1451           JAXUCZ010000021.1  120444504-120444747
            1452-1542           JAXUCZ010000021.1  120445593-120445683
            1543-1657           JAXUCZ010000021.1  120453225-120453339
            1658-1779           JAXUCZ010000021.1  120456256-120456377
            1780-1938           JAXUCZ010000021.1  120458185-120458343
            1939-2101           JAXUCZ010000021.1  120459929-120460091
            2102-2251           JAXUCZ010000021.1  120461024-120461173
            2252-2711           JAXUCZ010000021.1  120464112-120464571
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq34"
     gene            1..2711
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /note="LON peptidase N-terminal domain and ring finger 3"
                     /db_xref="GeneID:298322"
                     /db_xref="RGD:1565451"
     exon            1..965
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     CDS             134..2407
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /codon_start=1
                     /product="LON peptidase N-terminal domain and RING finger
                     protein 3"
                     /protein_id="NP_001178514.1"
                     /db_xref="GeneID:298322"
                     /db_xref="RGD:1565451"
                     /translation="MDSLQTAQMVSLSAELGSNNLELAEPEEPAASMAVGESAAHSEK
                     VTPEGSQPPGAQEPEQSQPLAASTPPECKVLLTQADALASRGHLREALEVYRQLSERQ
                     QLVAEQLEQLVRCLADSIPQDELMAPAPADPSATSSCCAAALKKAGEAAAVAPEVWDG
                     FKCRKCHGFLSDPVSLWCGHTFCKLCLERGRAADRRCALCGVKLSALMVASGRARGPR
                     RSGPQAPLQLRVNVVLSGLLGKLFPGPARASQLRHEGNRLYRERQVEAALLKYNEAVR
                     LAPNDHLLYSNRSQIYFTLESHEDALHDAEIACKLRPMGFKAHFRKAQALATLGKVKE
                     ALREFLYCVSLDGKNKRARSEAQRENSELPHCSNQEGAAAREESSSLVNMAQGKVSRK
                     EDRAKSQEEEEQDAASVRTGKCLEKKRNRCQIETQEDTELPNKVSKQDLPAEQGAKPD
                     LSIPLGSFDASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQ
                     CLPSRKYSKNVIMEELIAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCTMAYPTV
                     PCPLHIFEPCYRLMIRRCIETGTKQFGMCLGDPVKGFAEYGCILEIRNVQFFSDGRSV
                     VDSIGKRRFKVLHQGQRDGYNTADIEYIEDQKVQGDDCAELVGLHNCVYEQASSWFHS
                     LKTSLKNRILNHFGPMPEKDEDPQVNPNGPAWCWWTLAVLPLESRAQLPFLAMRSLKD
                     RLNGIRRILAFISRNQN"
     exon            966..1084
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            1085..1207
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            1208..1451
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            1452..1542
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            1543..1657
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            1658..1779
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            1780..1938
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            1939..2101
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            2102..2251
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
     exon            2252..2711
                     /gene="Lonrf3"
                     /gene_synonym="RGD1565451"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgaggcaga ctcgcgcgcg cggcgatccc gccttctcgt cagcgcagcc cgcttccagc
       61 cgccgctctt tcctgctagt tccctgttcc tagacgcctc tcctcactcc aacctccgca
      121 gttccctctc tcaatggatt cccttcagac cgcacagatg gtgagcttgt ccgccgagct
      181 cggcagcaac aacttggagc tggcggagcc ggaggagccg gcggcatcga tggccgtagg
      241 agagtcagcc gcccactcgg agaaggtgac acccgagggc tcccaacctc ccggggctca
      301 agagcccgag caaagccagc ctctggcggc ctcgacgccg ccggagtgca aagtcctgct
      361 cacgcaggcg gatgccttgg catcccgggg gcaccttcgg gaagccctcg aggtgtaccg
      421 acagctctcc gagaggcagc agctcgtggc ggagcagctg gagcagctag ttcgctgcct
      481 ggccgacagt atcccgcaag acgagctgat ggcgccagct cctgcagacc cgagcgccac
      541 ttcgagctgc tgcgcagcgg cgctgaaaaa ggcaggggag gccgcggccg tggcccccga
      601 ggtatgggat ggctttaagt gcaggaagtg tcacgggttc ctctccgacc cggtgtccct
      661 gtggtgcggc cacacctttt gtaaactgtg cctggagcgc gggcgagccg ccgataggcg
      721 ctgcgctctg tgcggggtca agctctccgc actcatggtg gccagtggga gggcacgcgg
      781 gccgcggcgc tcggggccgc aggcgccact gcaactgcga gtcaacgtgg tactcagcgg
      841 tctcctgggc aagttgttcc cgggccccgc gcgagcgtcg caactccggc acgagggcaa
      901 ccggctgtac cgtgagcgcc aggtggaggc ggctctgctc aagtacaacg aggctgttcg
      961 tctagctcca aatgaccatt tgctttatag caatcggtcc caaatttatt tcaccttgga
     1021 gtctcatgag gatgcactgc atgatgcaga aatagcatgt aaactacggc caatgggttt
     1081 taaggcacac ttcagaaaag cacaagcttt agccacccta ggcaaggtga aagaagcact
     1141 cagagaattt ctctactgtg tatcccttga tggaaagaac aagagagcca gatctgaagc
     1201 gcaaagggag aattcagagc ttccccattg ttctaatcag gagggagcag cagctaggga
     1261 agaaagcagc agcctagtga acatggctca aggaaaggtg agtagaaaag aagacagagc
     1321 gaaaagtcag gaagaagagg aacaagatgc tgcctccgtc aggaccggca aatgcctgga
     1381 aaagaagagg aatcgttgcc aaattgaaac ccaagaagac acagaattgc ctaataaagt
     1441 ctccaaacaa gatcttcctg ctgagcaggg ggccaaaccg gatctcagta ttccacttgg
     1501 atcttttgat gcatctgacc ttgaatgctc actgtgtatg agattgttct atgagccagt
     1561 cacaacacct tgtgggcaca ccttttgctt gaaatgtctt gagagatgcc tggatcataa
     1621 tgcaaagtgt ccactgtgca aagacgttct tttacagtgc ttgccatcaa gaaaatacag
     1681 caagaatgta ataatggaag aactcatagc taagttccta ccagaagaac tcaaggaacg
     1741 aagaaggctt tatgaagaag aaatggaaga gctttctaac ttaaataaga atgtgcccat
     1801 tttcgtgtgt accatggcct atcccaccgt tccttgtccc ttgcacatct ttgagccttg
     1861 ttaccgcctg atgattcgaa gatgtattga gacaggcaca aaacagtttg gcatgtgcct
     1921 tggagatcct gtcaaagggt ttgcagaata tggctgcatc ttggagatca gaaatgtcca
     1981 attcttttct gacggccgat cagtggttga cagcataggc aagaggcgct tcaaagtgct
     2041 ccatcagggt caacgggatg gctacaacac tgctgacatt gaatacattg aagatcaaaa
     2101 ggttcaggga gacgattgtg ctgaactcgt gggattgcat aactgtgtgt acgagcaagc
     2161 gtcatcatgg tttcattcac tcaaaacatc gctgaagaat cggatactaa atcactttgg
     2221 cccaatgcca gagaaggatg aagaccccca ggtcaatccg aatggtccag cctggtgctg
     2281 gtggacactg gcggttcttc ccctggaaag cagagctcag cttcccttcc tagcaatgag
     2341 gtccttaaag gatagactga atggtatccg gcgtatcctg gcctttatat cgagaaacca
     2401 aaattaatgg gtctggattg tggaagagga atttccaccc tctccactgc cccagggcaa
     2461 tgttcttgta aacatagcta attgtaataa cactttaaca gaagaaagta ccgtagagag
     2521 atgttactct gctttatggc cacaaagaaa atagatagaa agacgcaaag gatgtgacct
     2581 gttcagcttt ctgtcttcag atgctttttg acactgtgct aacacactag cagcagaagt
     2641 gtggaagagg ccaaaacatg ttgatgttta gcatcatttt tttctgaaat taaaaagtaa
     2701 cttgtctttc a
//
