LOCUS       XM_006244869            5168 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus LON peptidase N-terminal domain and
            ring finger 2 (Lonrf2), mRNA.
ACCESSION   XM_006244869
VERSION     XM_006244869.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006244869.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006244869.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5168
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5168
                     /gene="Lonrf2"
                     /note="LON peptidase N-terminal domain and ring finger 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 ESTs, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 53 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:301361"
                     /db_xref="RGD:1562137"
     CDS             254..2515
                     /gene="Lonrf2"
                     /codon_start=1
                     /product="LON peptidase N-terminal domain and RING finger
                     protein 2"
                     /protein_id="XP_006244931.1"
                     /db_xref="GeneID:301361"
                     /db_xref="RGD:1562137"
                     /translation="MSPEPAPPEPQGVRSSLEEPSAEPLGQGSAAFLAGDYEVAAELF
                     RSLLAGLAQPERGLCLQLGEALARAGRLPEAIGAFRGAALLGPLQPGELSELASGLAR
                     ALGLREKRPPVAARPGGCASGTSGPVAPRDLLGCPRCGRLLYKPVTLSSGLTVCKRCV
                     EQVPVRAQARRVNVVLSGLLERCFPAECRLRRLACQARGLQRQQQPEAALLRCQQALD
                     MAPDDSSLLLLRAELYLTMKNYEQALQDADTVCQREPLLTKGHHIKAQILSGLGRNKE
                     VLKEFIYCLALNPECNSAKKETQKVICEVFFSASENEQQNSAPSTQTGPKALCDGQMS
                     PQNPLEEAGGHANADSPKTPSEKPDVPENTNSSVLYFILGLHCEEDKKALEGVIPAAP
                     SGTLKRQLPSDAEDKELDVNTPEKIPKKDADSSPQRNANSLEEEPEFTIDATDFECAL
                     CMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLATRNFNVTVLTEELI
                     FRYLPDELSDRKRVYDEEMSELSHLTRDVPIFVCAMAFPTVPCPLHVFEPRYRLMIRR
                     CMETGTKRFGMCLSAENAGISEYGCMLEIKDVRTFPDGSSVVDAVGISRFRVLSHRHR
                     DGYNTADIEYLEDEKVEGAEFEELTALHESVYQQSVSWFASLQDHMKKQILSHFGSMP
                     DREPEPQSNSSGPAWSWWILAVLPLERKAQLAILGMGSLKERLLAIRRILVIITRKLN
                     SRQEMANNAQRDN"
ORIGIN      
        1 aaaaaaaggt tcaggcagaa cgccggcgcc gtgagggggt cgccaacgct cccacggtca
       61 cttggctgac gtgagccact ggggcgcgca ctgggacgcg cacggcgcct cgttccagcg
      121 tgcgctgcgc ttcctccgag ctcgtcgcgc gtggtccccg cggctcgcag caccgggtcc
      181 gctgacgctc gtggctgaag gcgaagaggg cagaaaccgc gttccagccg ccaaacaccc
      241 ctgtctccgc acgatgagcc ccgagccggc gcctccggag cctcagggcg tgcgcagcag
      301 ccttgaggaa ccctcggccg agcccctggg gcagggctcc gcggccttcc tcgcgggcga
      361 ttacgaggtg gcggccgagc tctttcgctc gctgctggcc ggcctggcgc agccagagcg
      421 cggcctgtgc ttgcagctgg gagaagctct ggcccgcgca ggccgcctgc ccgaggccat
      481 cggcgcgttc cgcggcgccg cgctgctcgg cccgctgcag cccggagagc tgtccgagct
      541 ggcgagcggc ctggcgcgcg ccctgggcct gcgcgagaaa cggccgcctg tggcggcgag
      601 gcccggaggc tgtgcgtccg ggacctcggg gcctgtggcg ccgcgcgacc tgctgggctg
      661 tccgcgctgt gggcggctgc tctacaagcc ggtgacgctg tccagcgggc tcacggtgtg
      721 caagcgctgc gtagagcagg tgccggtgcg ggcgcaggcc cggcgcgtga acgtggtgct
      781 gagcgggctg ctggagaggt gcttccccgc cgagtgtcgc ctgcgcaggc tggcgtgcca
      841 ggcgcgggga ctacagcgcc agcagcagcc cgaggccgcg ctgctcaggt gccagcaggc
      901 cctggatatg gcccctgatg acagttcatt attgctgctg cgagctgagt tatatttaac
      961 catgaagaac tatgagcaag ccctgcagga cgctgataca gtttgtcaga gggaacctct
     1021 cctgaccaag gggcaccaca taaaagccca gattctttct ggattgggaa gaaataaaga
     1081 agtgttaaag gaatttatct actgccttgc tttaaatcct gagtgcaact cggcgaagaa
     1141 ggaaacgcag aaggtaatat gtgaggtgtt cttttcagct tcagaaaatg agcaacagaa
     1201 ctcagcacct tccacccaaa ctggaccgaa ggccctttgt gatggccaga tgagcccaca
     1261 gaatcctctg gaagaagcag gcggtcacgc taatgcagac agtcctaaga ctccatctga
     1321 gaagcccgat gtaccagaga acaccaactc ctcggttttg tattttattc tgggcctcca
     1381 ctgtgaagag gataagaagg cgctggaagg cgtcatccca gctgcaccaa gcggcacctt
     1441 gaaaaggcag cttcccagcg atgcagaaga caaggagctt gatgtgaata cccctgagaa
     1501 gattcccaaa aaagatgcag attcctcacc tcagaggaat gcgaactctt tagaagaaga
     1561 gccagagttc acaattgatg cgactgactt tgagtgtgca ctgtgcatga ggttgctctt
     1621 tgaacctgtc actacgccct gtggacatac gttttgcctc aaatgccttg agcgctgcct
     1681 ggaccatgcc cctcactgtc cactgtgcaa agacaagctt tcagagctgt tggcaaccag
     1741 gaatttcaat gtgaccgttc tgactgaaga gctgatattc cggtacttac cagacgagct
     1801 gtctgacagg aagagggtct atgatgaaga gatgtcagaa ctgtcccatc tgaccagaga
     1861 cgtgcccatc ttcgtgtgtg ctatggcctt ccccacggtt ccctgccctc tccatgtgtt
     1921 cgagccccgc taccggctca tgataaggag atgcatggaa actggcacca agcgatttgg
     1981 catgtgttta tccgcggaga acgcagggat ttcagagtat ggctgcatgc tggagataaa
     2041 ggacgtgagg acttttcctg atgggagctc tgtcgtggat gcagttggga ttagccgctt
     2101 cagggtccta agccaccgcc accgagatgg ctacaacacc gcggacatcg agtacctgga
     2161 ggacgagaag gtggaaggcg cagagtttga agaacttacc gccctccacg agtccgttta
     2221 ccagcaatct gtttcctggt tcgcttcact ccaggatcac atgaagaaac aaattctaag
     2281 tcattttggc tccatgccgg atagggagcc ggagccacag agcaattcta gtggccctgc
     2341 ctggtcctgg tggattctgg ccgtgttgcc cttggagcgt aaggctcagc tggccattct
     2401 cggcatgggc tccttgaaag agcgtcttct tgccattcgt cggatactag tcatcatcac
     2461 acgcaagctg aacagtcgcc aagagatggc taacaacgca cagagagata attgatcttc
     2521 ctctctctta aggttgccgg aagcccctgt gtttttgagt tccagacact gacaaatacc
     2581 catccccttc ggtgtgcttc ataaaatctt gtcgatgtgg tggtaagtgg gacatttgcc
     2641 aaataccgtt tttctcacac atacgtctac ctgctggact ccgatcctgt gcaagaatca
     2701 cctgaggttc aagtggaagg tacaggcgag aaatccttga gagagtctct tcaaagcaga
     2761 tgcttcgaga ctaaagctca ctgccagcaa gtgacacacg cacggttgac atgtgacttt
     2821 ggtgtcgaag gtgattatat tcctagcctg tatcttgaca tgattggtgg aaaatgtgtg
     2881 tgccagtagc tagacagtga gtgggaacca cggacatatt aggatataag caagtcaaaa
     2941 ctggacttgg cttctgtgtg tcgctgtgaa cttgcttgca aaatcaatga actgaacact
     3001 atccagccct tactgaagaa gtagtaatta ctgggcagag ccgtgtttgt gtttcgtgtc
     3061 ctgccgtaac cccaggtgtt gtaaattgca tgttgtaatt gaatgaatgt gaaactacaa
     3121 gaagacgtac cttgcatata gaagagtctg agaaccgcag tattttgaga gtatatattc
     3181 ataagcaccc cagaagggta gtcaaaagag agttagagct gtgtgtgcac tggggtgtca
     3241 aacatacagc caaatgtatt ctaaacaaag tgttatctct gttcaactgg gaatttccca
     3301 tcagataacg ctaggtgtga ctcccgacct ccagtgcatg ttgggaatat atatcacttg
     3361 aataacacag acattctgag cagctggcgc agacagcctg ctgctgctta gtctgtaaga
     3421 taacacccga cagacaagac cctgctgagc aaatctcagc ggggcgttct gctgtctccc
     3481 ttcaaggtgt gtgggtttaa tttaaatgta tattttatga tacgaagtgt tgatggttta
     3541 tcaacccatc aagcacttta ttagaaagtc gtacgatcac agtgatgttg tattttattg
     3601 ttcttttcag ctagtgaatc tcagcttcgc cataggactt agaataaaac acccatctca
     3661 tttcagaggg gctaaaagcc cttcgagcaa gcctttccac cacgcattaa gagttcaact
     3721 ctaggggttg gggatttagc tcagcggtag agcgcttgcc tagggagcac aaggccctgg
     3781 gttcggtccc cagctccgaa aaaaagaaaa aagaaaaaga aaaaaaaaag agagttcaac
     3841 tctatttggc atttatgaca tcatctgacc gcttaaaaca tggctgtcac tcttgtacag
     3901 aagtccttga ctagaacatg ctcgtgaaaa ctaacaggtt ttgatttgtt ctcttttgga
     3961 aagaaagaga gcaggagttg gtgttgttac actgtttctg tttggaagtg tctatccagt
     4021 gtgatcatag cttctccagg actctgctgg gagttcagcg tctgtgctga gttagtgtta
     4081 ggaaggtttt gcttctgcct gctggcgtgt tagcttttat aacttactga gttcagagtc
     4141 gttatgctgt cctccctggt tctgtctgcc tctttagtct tcccatcctc aatgtcctta
     4201 cgtaaaagcc cctgtaacag caatgcaaag gagaacaatg gaagttttgg ggattcagta
     4261 ccaaagagaa tggtgtgact gccgcgtgct ctgtgtcaca tctcactgtg cagtaacaga
     4321 ccagatctca ttgggtactt ttaggggagt ctggttatcg gaagatttca gtagcacaag
     4381 agcgccacca ttgcccccaa ccaaggtggg gacgttctct ccaaactgtg cctgggtgtt
     4441 gatttataaa cagcagtgtg gacaacgagt gctagtgaga gagaaggtta ctgttccagg
     4501 tcctctacaa acaagaggct cgtcgcccag gctctgtgag aagcagttgt gtcaggcagg
     4561 agtgtgggtg attctcaggt tccatcgtac gggcttcagt tttaacaagg atggattgtg
     4621 agagcatcag gcagcagaag agacctggac tagcccacca agccctttct tgatagaggt
     4681 catactagat gcacaaaacc ctgtttccag aattacagac aactccagag cttctgtgcg
     4741 agcctccggt gtgtgagcct cggtgcaaaa agccttccaa tccctttgta cccctaaaac
     4801 aaactggaga aagctctttg gcctgagcca acaaagaatt tagagttcct ttctccaggc
     4861 ctcccactgg gttgcagcag ctccttctga actagagaca cacactccag gagaaaaaga
     4921 aactctgtaa gtcagcagac cagatcaaca gaccccatgc tgggctcagg cagtcacacc
     4981 ccacctttcc caacaatggg gatgagtagc agaatttggt ccattagttt gtatggagat
     5041 taaaaagaga caaagggttt ccaaagatgc tctgtttgac tggaatgcag tagacagggt
     5101 ttccacagac tgtagatcgt acaagaaaag cccattccct gaccctgaca cagaagaagc
     5161 ccctacca
//
