LOCUS       XM_017600372            3717 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus LON peptidase N-terminal domain and
            ring finger 1 (Lonrf1), mRNA.
ACCESSION   XM_017600372
VERSION     XM_017600372.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017600372.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017600372.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3717
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3717
                     /gene="Lonrf1"
                     /note="LON peptidase N-terminal domain and ring finger 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 ESTs, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 202 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:306505"
                     /db_xref="RGD:1562583"
     CDS             5..2398
                     /gene="Lonrf1"
                     /codon_start=1
                     /product="LON peptidase N-terminal domain and RING finger
                     protein 1"
                     /protein_id="XP_017455861.2"
                     /db_xref="GeneID:306505"
                     /db_xref="RGD:1562583"
                     /translation="MSARHAPLLAGRVRSRAPRRFPDRGGGRRRRSSPARAMSSPAVA
                     RASPGGNRETAGGPRSRNGPWEVGGGERLERAGAEPGRWELLLRRGELLALGGHLKGA
                     LEAFAAALRRGAPARPERLGSLVDCLVFSYRLRHGLRWSAAPAAGAAGLLSCLGCRGF
                     LSEPVTVPCGHSYCRRCLRRELRARCRLCRDRLPPAAAASEGTPRPPPLAAAIADFRT
                     SVVLNHLAEKWFPGQRERARAAGRLGELLHEGRYREALAAACDALRAEPSDLTLKIYR
                     AESYAGLQEFKAALEDLNAVLFQLPNWPEVYFRKGKVLQDAGFLGDALQLFLQCLALD
                     EDFAPAKLQVEKILCDLLSPENVKEGLKGSSWSSLPCTKSKPLGFPSVMEQPHSPPEL
                     GLKQTEEQAEDASEPVKGSLNRAQSAQAISAAAVPAREDGLKRVCSEPVLCAQGKGAL
                     LKRKLSLLEQDVIINEDGRNKLKKQESPGEDCMFSIAYGDIPEELIDVSDFECSLCMR
                     LFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEDLIVKY
                     LPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMIRRSIQ
                     TGTKQFGMCVSDTQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGMKDGY
                     CTADIEYLEDVKIENGDEIRSLRELHDLVYSQACSWFQNLRDRFRSQILQHFGSMPER
                     EENLQATPNGPAWCWWLLAVLPVDPRYQLSVLSMKSLEERLTKIQHILTYFSRDQSK"
ORIGIN      
        1 cgccatgtcc gcgcgccacg cccccctgct cgccggccgc gtgcggagcc gcgcgccccg
       61 gaggttcccg gaccgtggcg gcgggcggcg acggaggagc agccctgcgc gggccatgtc
      121 ttctccggcc gtggcgaggg cgtccccggg cgggaatcgg gagacggccg gcggaccgcg
      181 gagccggaac gggccgtggg aagtgggcgg cggcgagcgg ttggagcgcg cgggcgcgga
      241 gccggggcgc tgggagcttc tgctccgccg cggcgagctg ctggcgctgg gcggccacct
      301 gaagggagcg ctggaggcgt tcgcggctgc gctgcgccgc ggggccccgg ccaggcccga
      361 gcgcctcggt tcgctagtgg actgcctggt gttcagctac cggctccgtc acgggctgcg
      421 ctggagcgcg gcacccgccg cgggcgcggc cgggctgctc agctgcctgg gctgccgggg
      481 cttcctaagt gagccggtga ccgtgccgtg cggccacagc tactgtcgcc gttgcctacg
      541 gagggaactg cgcgcccgct gccgcctgtg ccgggaccgt ctgccacccg ccgccgccgc
      601 ctccgagggg accccgcggc cgccgcccct ggccgccgcc atcgccgact tccgaaccag
      661 cgtcgtgctc aaccacctgg cggagaagtg gttcccgggc cagcgcgagc gcgcgcgggc
      721 ggccggccgc ctcggggagc tactacacga aggacgctac cgggaggccc tggccgccgc
      781 ctgcgacgct ctgcgagcag agccgagtga cctgactctc aaaatctaca gagcggagtc
      841 ctacgccggc ctgcaggagt ttaaagcagc cttagaggat ctaaatgcag ttctctttca
      901 gcttcccaac tggcccgagg tctacttcag gaaagggaaa gtcctgcagg acgccgggtt
      961 cctgggcgac gccttacagc tcttccttca gtgcttggcc cttgatgaag acttcgcacc
     1021 tgcaaagctg caagtagaaa agattctgtg tgacttactg tcacctgaaa acgtaaagga
     1081 aggcctgaag gggtcttcct ggagttcgtt accgtgtact aaaagcaaac ctcttggttt
     1141 tccgtcagta atggaacagc cacactcccc tcctgagctt ggcctgaagc agactgaaga
     1201 acaagcggag gatgcctcag agcctgtcaa gggaagccta aaccgcgctc agtccgcaca
     1261 agccatcagt gcagcagcag tgcctgccag ggaggatggc ttaaagcgcg tgtgctcgga
     1321 acccgtactg tgcgctcagg gaaaaggcgc tctgctgaaa aggaagctgt ctctcttaga
     1381 acaggatgtg atcattaacg aggacgggag gaataagctc aaaaagcaag aatctcccgg
     1441 ggaagactgt atgttctcaa tagcttatgg tgacatcccg gaagaactaa tagatgtctc
     1501 agacttcgag tgttctctct gtatgaggtt gttttttgag ccagtaacaa ccccttgtgg
     1561 acactcattc tgcaagaatt gtcttgagcg ttgcttagat catgctccat attgtcccct
     1621 ctgcaaagaa agcttaaaag agtacctggc agacaggagg tactgcgtca cgcagctatt
     1681 ggaggactta atagtgaaat acctgccgga tgagctgtct gagaggaaga agatctacga
     1741 tgaggaaact gccgagctct cacacttgac caagaatgtc ccaatattcg tttgcactat
     1801 ggcctacccc actgtgcctt gccctctcca tgtgtttgag cccagataca ggctcatgat
     1861 ccgaagaagt atccagactg gaaccaagca gttcgggatg tgtgtcagtg atacacaaaa
     1921 cagttttgca gattatggtt gtatgttaca aattcgaaat gtgcatttct tacctgacgg
     1981 aaggtctgtt gttgacacag ttggaggaaa gcggttcaga gttttaaaaa gaggaatgaa
     2041 agatgggtat tgcactgcgg acattgagta tctggaagat gttaagattg agaacggaga
     2101 tgaaataagg agtctgagag aactccacga cttggtgtac tcgcaggcct gcagctggtt
     2161 tcagaattta agagacagat ttcgaagcca aatccttcaa cactttggat caatgccaga
     2221 gagggaagaa aacctccagg caacacccaa cggacctgca tggtgttggt ggctgctggc
     2281 agtccttcct gtagacccgc ggtatcagct ctctgtactg tcaatgaagt ctttggagga
     2341 gcggttgacc aagatacagc atattctgac ttatttttct agagaccaat ctaagtaatg
     2401 aactgcttgg atctcgtttt gctcgctctt agcccagagg ctgagaagcg gttggatctt
     2461 actttaaagt cgccctgatc tggctccttg atggccggat tgcccgctgc ctttgcacac
     2521 ccagtgctgg tttgagaaat taaggaaact tttcttttct tcaacctcct gaatctcgtg
     2581 gatctgcaaa tgaatacctt caactaggtc ctagaccact aagaacttgc acagaaaaca
     2641 cgcactgaat gtgtgttaaa cctcgacatt gtgataaagt tgcactatgt accatactct
     2701 aaatgaacta agaactccgt gtatgtatga tgtgtgtgtg tgtgcgcgtg tgcttataca
     2761 catgtgtacg tgtgtgtgct catgcacgtg tgtatgtgcg tgcgtgtgtg cgtgcgtgtg
     2821 cgtgtgtgtg tgtgtgtgtg tagtgtgtgt gtgtgtagtg tgtgtgtgtg tagtgtgtgt
     2881 gtgtgtgtgc tttttctctg gctttaaatt ttaaaagaca aaaaaaaaaa agccatagag
     2941 agtgaacttg ctgaaggtcc tctactgccc aagtttacaa cagtagtcat agaagttttc
     3001 gcagattgaa tttgcctcag atttatttgt cctgatgctt ctatttgcac aagtgtgtaa
     3061 actatggtat agagtatcat tttctgttgg aaattctgct cttgctgaac tgtcttggcc
     3121 attgactatg acacagttaa ttatttatgt aaatacatgc atcccagtgg ccggcaggca
     3181 ggatgcagac tctagagcca gtctccagta acaactgcaa acctgacatg gtactgtgca
     3241 cccactcata aactcttaaa actgtgaaaa tacggtttac attaaatgta cataaaggta
     3301 gacggagaac tcgattcagc cagttagctt gtacatttta gggggctttt cacattaact
     3361 gcccgtctat gtcatttaga gtttgaaacg ataacttgta tttaaggaaa tatgtagtgt
     3421 ataattggtt gaggatctgg gggaggagga aaagcttcat gtaggactaa gcttgtaagg
     3481 tttgttttgt tttgactctg gtcttggtgc aaatgttagt tatgccttat tcataccaca
     3541 gttagagcac cgtgctgcga catgggtatg tccatgctgc ccggcccttt tataattatt
     3601 tgttgcagat ttgtgactgt ctctattaac tttcttttat gtaagtaatt tgtacaagtt
     3661 tcttaagatt tttgcttttg cttatttaat tttgaataaa agctaaattc ataataa
//
