LOCUS       NM_001415730            6268 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus leishmanolysin like peptidase (Lmln), mRNA.
ACCESSION   NM_001415730 XM_006248453
VERSION     NM_001415730.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6268)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Dec 27, 2022 this sequence version replaced XM_006248453.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.67050.1,
                                           SRR26643429.41448.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-238               JAXUCZ010000011.1  81228958-81229195   c
            239-336             JAXUCZ010000011.1  81224332-81224429   c
            337-367             JAXUCZ010000011.1  81223309-81223339   c
            368-450             JAXUCZ010000011.1  81221959-81222041   c
            451-568             JAXUCZ010000011.1  81220991-81221108   c
            569-747             JAXUCZ010000011.1  81216955-81217133   c
            748-853             JAXUCZ010000011.1  81212868-81212973   c
            854-948             JAXUCZ010000011.1  81211120-81211214   c
            949-1066            JAXUCZ010000011.1  81207906-81208023   c
            1067-1174           JAXUCZ010000011.1  81206544-81206651   c
            1175-1251           JAXUCZ010000011.1  81204670-81204746   c
            1252-1362           JAXUCZ010000011.1  81200169-81200279   c
            1363-1495           JAXUCZ010000011.1  81193941-81194073   c
            1496-1655           JAXUCZ010000011.1  81185045-81185204   c
            1656-1786           JAXUCZ010000011.1  81182659-81182789   c
            1787-1997           JAXUCZ010000011.1  81171819-81172029   c
            1998-6268           JAXUCZ010000011.1  81161330-81165600   c
FEATURES             Location/Qualifiers
     source          1..6268
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q22"
     gene            1..6268
                     /gene="Lmln"
                     /note="leishmanolysin like peptidase"
                     /db_xref="GeneID:363795"
                     /db_xref="RGD:1311465"
     exon            1..238
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..2098
                     /gene="Lmln"
                     /EC_number="3.4.24.36"
                     /note="leishmanolysin-like (metallopeptidase M8 family)"
                     /codon_start=1
                     /product="leishmanolysin-like peptidase precursor"
                     /protein_id="NP_001402659.1"
                     /db_xref="GeneID:363795"
                     /db_xref="RGD:1311465"
                     /translation="MAAAGSGVAGGPGPGPRGRWGGCLWVRGVLLVLGGLPAGAAAAP
                     VSLGTSPPCRHHVLSDTEVINKVHLKTSHVTKRDADGHLRIKTIYDQSIEELLPEKRY
                     LVKNKLFPQAISYLEKTFQVRRPAGRILLSRQCATNQYLRKENDPHRYCTGECAVHTK
                     CGPVIVPEEHLQQCRVCREGKWPCGAVGVLDPEGVQDADFVLYVGALATERCSHENII
                     SYAAYCQQEAKMDRPIAGYANLCPNMISTQPQEFIGMLSTVKHEIIHALGFSAGLFAF
                     YHDQDGNPLTSRSADGLPPFNYSLGLYQWSDKVVRKVERLWNVRDNKIVRHTVYLLVT
                     PRVVEEARKHFNCPVLEGMELENQGGMGTELNHWEKRLLENEAMTGSHTQNRVLSRIT
                     LALMEDTGWYKANYSMAEKLDWGRGMGCEFVRKSCKFWIDQHRQKRQVPSPYCDTLRS
                     NPLQLTCRQDQRAVAVCNLQRFPNPLPPEYQYFDELSGISAEDLPYYGGSVEIADYCP
                     FSQEFSWHLSGEYQRSSDCRILENQPELFKNYGAEQYGPHSVCLLQKSAFVMEQCERK
                     LSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVRIQMNGWIHNGNLLCPSC
                     WDFCEQCPPETDPPAANLTRALPLDLCSCSSSLVVTLWLLLGNLFPLLAGFLLCVWH"
     exon            239..336
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            337..367
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            368..450
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            451..568
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            569..747
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            748..853
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            854..948
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1066
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            1067..1174
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            1175..1251
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            1252..1362
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            1363..1495
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            1496..1655
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            1656..1786
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            1787..1997
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
     exon            1998..6268
                     /gene="Lmln"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgggcggcag cggggaggcg tcgcactcca tggtaacgac gccggcccga agatggcggc
       61 cgctgggtct ggagtagcgg gcggcccggg accagggccg cgaggccgct ggggcggctg
      121 cctgtgggtg cgaggcgtcc tgctcgtgct gggcgggctc ccggccggcg ccgcggctgc
      181 tccagtctcc ctgggcactt cgcctccgtg tcggcatcac gtcctttcgg acactgaggt
      241 cataaataag gtccatctta agacaagtca tgtcacaaag agagatgcgg atgggcattt
      301 acgaatcaag actatctatg atcagagcat tgaagagttg ctccccgaga aaagatatct
      361 tgtaaagaac aaacttttcc cacaagctat ttcttattta gagaaaacat ttcaggttcg
      421 aagacctgct ggcaggatct tacttagcag acaatgtgcg acaaaccagt acctacggaa
      481 ggaaaacgat ccgcaccgat actgcactgg ggagtgcgcc gtgcacacca agtgtgggcc
      541 tgttattgtg cccgaggagc acctccagca atgcagggtc tgccgagagg gaaagtggcc
      601 atgtggagcg gtgggtgtgc tagaccctga gggcgtgcag gatgcggact ttgttcttta
      661 cgtaggtgct ctagccactg agagatgcag ccatgagaac atcatctctt acgcggccta
      721 ttgtcaacag gaggcgaaaa tggacaggcc catagcagga tatgctaacc tgtgtccaaa
      781 tatgatctcc acccagccac aagagtttat cgggatgctg tccacagtga agcacgagat
      841 cattcatgcc ctgggcttct cggctgggct ctttgcattc taccatgatc aagatgggaa
      901 ccccctgact tcaaggtctg cagacggcct cccacccttc aactacagtc ttgggttgta
      961 tcagtggagc gataaagtgg ttcggaaggt ggagagattg tggaatgttc gagataataa
     1021 gatagttcgc cacactgtgt atctcctagt aacaccgcgt gttgtcgagg aagctcggaa
     1081 gcattttaac tgcccagtcc tagagggaat ggagcttgaa aaccaaggtg gcatgggcac
     1141 agagctcaac cactgggaga agcgcttgct agagaatgaa gcaatgactg gttctcacac
     1201 ccagaacaga gtcctgtctc gaatcaccct ggcattaatg gaggacactg gctggtacaa
     1261 agcaaattac agcatggctg agaaactcga ctggggccga ggaatgggct gtgaatttgt
     1321 caggaagagc tgtaaattct ggatcgatca gcacaggcaa aagaggcagg tgccgagccc
     1381 gtactgtgac acgctcagga gtaacccgct gcagctgact tgccgacagg accagagagc
     1441 cgtcgctgtg tgtaacctgc agagatttcc caacccctta ccaccagagt accagtactt
     1501 tgatgagctc agtgggatat ctgccgagga tctgccttac tatggtgggt cagtcgaaat
     1561 cgctgactat tgccctttca gtcaggaatt cagctggcat ttaagtggcg agtaccagcg
     1621 cagctccgac tgtagaatac tggaaaacca accagagctg tttaagaact acggtgcaga
     1681 gcagtacggg ccgcattcag tctgtctgct tcagaagtca gcgtttgtca tggagcaatg
     1741 tgagaggaag ctcagctacc cagactgggg gagcgggtgc taccaggttt cttgttctcc
     1801 tcaaggtcta aaggtttggg ttcaagacac ctcatatctg tgtagccggg cagggcaggt
     1861 cctcccggtt cgaattcaga tgaatggctg gattcacaat ggaaacctac tgtgcccctc
     1921 ctgctgggac ttctgtgagc agtgtccacc agaaacagac cctccagctg ccaacctgac
     1981 ccgagccctt cctctggatc tctgctcctg ttcttctagc ctggttgtca cgctttggct
     2041 cctcctcggc aatctgttcc ctctgctggc cggattcctt ctgtgtgttt ggcactagga
     2101 gtggaaaaga gaattctcca gacaacagtt tggtcgtgtt cccacgaaca gagcacagga
     2161 cctgggtgag cgcaagccag gcagaaaatg ctgacggcag acatggcatt ccggattctg
     2221 gcttggaagt gctgtccaca gtaggactgt gaagagtggg tcaccgagtg tgactgctcc
     2281 atgacagtca ctgctgacca gccacacagc cacctcggag tgtggagagg aactgcgcca
     2341 aggttcctta ggtcatggat atgcaacctc gtggcagttc tgcagttctc gtttaagccg
     2401 ggtggacggt ggggtctgcc acgatcactt acctcagcat gtgcattcat cgagcatcca
     2461 tgagcaccaa ggtccctcag acagcagctg atgagcttga gtccagagtt tgagttgagg
     2521 atcctatcat ccaaagtaca aaactggtca tcaggatttc agatctcccg ccaccatcgc
     2581 acatgtttta aatgaacatc ggatacgaca gacaccctca agtcatcact ccttgtctgc
     2641 tcgtgtttgc ctttcctgcc agctgtgtgg cagttggctg agctgtggtc agtggtgtta
     2701 gcgctctgca ctcagccgtc tccacctgag cttagtgtcc actcattttc ctcatttatt
     2761 tcatagcagc ttggaaaacc atgggagagg gtggagtaca gtgtgcggtc agagggctga
     2821 aatcatgcaa acagaaggcg gcagggttat acttcagata atatttacaa aatacagtaa
     2881 ttcatcaaaa ctcaactgac cccttctggc ctgtgtaaat gttaaaggtt tagacctgga
     2941 caggcttgca gttacttcca gaagtactgc taaatcacaa agttatttca tagacaagaa
     3001 gaaaaactcg ttaagacaaa gccgtctgaa ttgcttccta gctgcagagt acaggtttgg
     3061 ggtccagcct gcccaccggc ccatctggac gctgttacag cacttgtata ttacctctgt
     3121 taacctgtca ctttcctcct gcgcttgacc ctcctgtacc acgtggattc tgtgaagcag
     3181 ttctcctgac caaccatctg ggaacttaac tttgaaactc tttttttttt ttttttaaaa
     3241 aaaaagatgt ttattcattt tatgtatgtg agtacactgc agctgtcttc agacacacca
     3301 gaagagggca tcagatccca cctcagatgg ttgagagcca ccatgtggtt actgggaatt
     3361 gaactcagga cctctggaag agcggtcagt gctctcaacc actgagccgt ctctccaggc
     3421 ccactttgaa actctttaac gaaaagcgat accctgtttt tctccctaaa gataatcaat
     3481 tactgtagtg ttataaacag actttgggac cagcaagatg gctcagtggg taaaggtact
     3541 tgccaccaag cctgaagtcc tgagtttgat tactggagac cacttgggaa aagaaaggaa
     3601 ctgactcctg aaagttgtcc tctaaccaac acatgtgcat gcacacatgc acacacacac
     3661 acacacacac acacacacac acgtaaatgt aaaacagttt taaaatgaaa catgacattt
     3721 agacacactg gtcttccctc tgttccactt accatatagt tatttcgtgt tctagttaag
     3781 acatttacta gtggaacctg gtggcccatg atcccaacac ttgggaagta gaggcagaag
     3841 gattatgagt tcaaggtcat cctcagctgc atagtaaaat tcaattattg gctacatgaa
     3901 atactgtctt gggagtagat gggagaatgg ctgtgtcggg gaccaagcac tgtggagtga
     3961 acagcaatgc taaccagctg tggtaccgca gcagcctcag agtaaaggaa aattcccctt
     4021 cttttaagag tggaactttg aaatatgttc ttgcatgcag tgtaagttgg agggattcat
     4081 cactgtgcaa agccgagact cctaaaccca gccaactgca gctaaaatgg tcgtcatcct
     4141 cagaccagta caccgtgttt gccagcgttc tgcattctct aagctgtaca aagtcagaga
     4201 aaagcgagta tgtttctaaa gaaatatgca atatgccagc cacggtggca caggccttta
     4261 gtcctagcac ttggggtagt ggatacctga gtctatgacc agcctggtct acaaaagttc
     4321 cagaccagcc aatgtcacat agtgagagga acctgtctaa aaagaaaaaa ggaaatacat
     4381 attaaacctt gatacctatg gtgattatga ttgaacctac aaaatgtata aagaatttca
     4441 ccaaaaataa cagtggagtg tcctgagagt ccctggtagg tttgacgaca tttctactgt
     4501 catgaggcaa tgccatctag gtagtattgt ttccaagcgg tgctttttct acttgaaata
     4561 tatttttgct ttatatttta attaatatta tatttgcact aatgactttc tggagaaaat
     4621 gttacagatg acattttttg tatatacata tatatatatt tatttattaa gcttggaatg
     4681 tggtgtccca gtattttctc tgcacaagcg tgaaacttca tgcagccagt gtcacaaagc
     4741 actggactcc tgagtgtttc tagctgggtt gttttgtctc ttcctcttca gtgagcccag
     4801 agcaaggtca ctgtcgctta tcattgatcc tacatggtgt ccttagcaag gcttagatgg
     4861 tcacccagcc aggagacagt gtaagaggct cattgtcatc ccttagaata tagcaactaa
     4921 gaagtcgctt ctgcagtcga gatttcagta caggatcagc tgtagaattc agctgtgaag
     4981 ggaagaattt gaatcagcct tcatgctagt gaatcctttc gcatcgcaag gacaaaacca
     5041 gtcacccatg gaaggaaccg agcagggtgc tccatggtag aagtgagctg gggcaggaaa
     5101 gagaggggga cagctgatca gtagactgca gaccctttct gaatcagaaa tgtcaatgtt
     5161 tctaaagact gactacctcg gtgctcagtt cagacatgtc cttgtgagtg ttttaaggtc
     5221 ccaggtgtca aacatatcca gtgaattgtc tcaggttttt gcagaattta caggaaggaa
     5281 gccaagccat gtgaggagcc ttgagcagga tcaggaaagg agcgggacag cctttgacag
     5341 tctctgtgtc gactccttcg atttctcctg cagaacatcc ttccagtaat acttacattt
     5401 ttcctatagg attcttatat ttttaagacc aaatggggat tctaaaaatg ttataaatta
     5461 tacttagcat tagtttttaa cctaagttgg cttagagttt attgaaattt agatttaatt
     5521 gtatgggttg taaatagttt taggaagata cctaagtaag tgtgtcagag tatttcttga
     5581 aatgttatca ccagtctctt caatattaga ttcacagagt cagctgggca tggtggtcat
     5641 gcttataatc ccagcactta ggaggtagag gcagtaggat tatgatttaa gaccagcctg
     5701 ggcctcagag ggagacactg tctcaatcct acccttaccc tccctccccc caaaaaaatt
     5761 agcattcaca gccatgtata cagcaggcta gatggttggt ctgaaatttc acactgtaaa
     5821 gccctgagac taacacttga caaggcctaa gtcatggctg gccctgctca gcctcctgga
     5881 gtctccagcc tgcacattgt tccatgcctg gcctcgatga ccagaggaga gccagtctct
     5941 gaagacagct gaactgtccc agcatgaggt ggacatcact cacagtctca cagctggctt
     6001 catggtgagc actggttccc ctgacatgac ctttgcccct agcccaggag gcctgatgtg
     6061 ctgtgctcaa gcgaagctgc tcactgtgga gccagggtca agctggaaag gcttttccct
     6121 tttaaattag gttgggaccg gggagggaat gcttttatgt ttacattttt aataagatag
     6181 attaaaaatt gttctttatt tatggtggtg aacttgaagt gtaatgtatt ccttagaaga
     6241 acatgacttt aataaaaatg gaaactaa
//
