LOCUS       XM_340769               2152 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus lipase maturation factor 1 (Lmf1),
            transcript variant X1, mRNA.
ACCESSION   XM_340769
VERSION     XM_340769.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 16, 2024 this sequence was replaced by
            NM_001427222.1.
            
            On Jan 21, 2021 this sequence version replaced XM_340769.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2152
                     /gene="Lmf1"
                     /note="lipase maturation factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     ESTs, 4 long SRA reads, 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 196 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:360495"
                     /db_xref="RGD:1310180"
     CDS             30..1757
                     /gene="Lmf1"
                     /codon_start=1
                     /product="lipase maturation factor 1 isoform X1"
                     /protein_id="XP_340770.7"
                     /db_xref="GeneID:360495"
                     /db_xref="RGD:1310180"
                     /translation="MRPDSLVMAAPEGSLRKRKVGGAEHSPASPSALTRDPADSPAWL
                     HTGTFWLTRVVLLRALAFIYFVAFLVAFNQNKALIGDRGLLPCRLYLKNVQQYFHGST
                     GWSPWTYTPTIMWLLDWSDMNFNLDLLALLGLGLSSFVLVTGCANMILMAALWALYMS
                     LVNVGQIWYSFGWESQLLETGFLGIFLCPLWTLSRLPKHTPTSKIVLWGFRWLIFRIM
                     LGAGLIKVRGDKCWLDLTCMDFHYETQPVPNPMAYYLHRSPRWFHRFETLSNHFLELL
                     VPFFLFLGRRMCVLHGVLQILFQVVLIISGNLSFLNWLTIVPSLACFDDATLGFLFPS
                     GPRGLKKRVLEMQREDAQRVQPKPRYLGCVVRQAANISLGILVAWLSVPVVINLLSSK
                     QVMNTSFNPLRIVNTYGAFGSITKERTEVILQGTANPNASAPDAVWEDYEFKCKPGDP
                     WRRPCLISPYHYRLDWLMWFAAFQTYEQNEWIIHLTGKLLADDAEALSLLALNPFEGR
                     APPRWIRGEHYRYKFSLPGGQHAAQGKWWIRKRIGPYFPPLCLEDLKEYFKTREWPLP
                     EPPSRHTLK"
ORIGIN      
        1 ggcctccgcg cgcaccgccc tttgtgctca tgcgcccaga cagcctagta atggctgcgc
       61 ccgaggggtc gctgagaaaa cggaaggtcg gaggtgcaga gcacagtcca gcgtcgccat
      121 cagctctgac tagagatccc gcggactctc cagcctggct acacacgggc accttctggc
      181 tgaccagagt cgtgctcctg cgggccctcg ctttcattta ctttgtggcc ttcttggtgg
      241 cattcaatca gaacaaggcc ctcatcggtg accggggcct gctgccctgc agactgtacc
      301 tgaagaatgt ccagcagtat ttccacggca gcactggctg gagtccctgg acctatactc
      361 caaccattat gtggctgttg gattggtcag acatgaactt caacctggac ctccttgctc
      421 ttcttgggct aggcctgtcc tcctttgtcc tggtgaccgg ctgtgccaac atgatactca
      481 tggctgccct ctgggccctc tacatgtccc tggtcaacgt agggcagatc tggtattctt
      541 ttggatggga gtcacagcta ctggaaacag gattcctggg aatctttctg tgccctctct
      601 ggacgctatc ccgcctccct aagcacaccc cgacatccaa aatcgtcctg tggggcttcc
      661 gctggctgat cttcagaatc atgcttggag cgggcctcat caaggtccgt ggggataagt
      721 gctggctgga tctgacctgc atggacttcc attatgagac tcagccagtg cccaacccga
      781 tggcctacta cctgcacagg tcaccgcggt ggttccaccg ctttgagaca ctcagcaacc
      841 acttcctgga gctcctcgtg cctttcttcc tgttcctcgg acggcggatg tgcgttcttc
      901 atggggtgct gcagatcctt tttcaggtag tcctcatcat cagtgggaac ctgagcttcc
      961 tgaactggct caccatcgtg cccagtcttg cctgcttcga cgatgcaacc ttgggattcc
     1021 tgtttccctc aggaccgcga ggcctaaaga agcgagtcct ggagatgcag agggaagatg
     1081 cacagagggt ccagcccaag ccaagatact taggctgcgt ggtgcggcaa gcggccaaca
     1141 tctccctggg catcctggtg gcctggctca gcgtacccgt ggttatcaac ctcctaagct
     1201 ccaagcaggt catgaacacc tccttcaacc cactcaggat tgtcaacacc tatggggcct
     1261 tcggaagtat caccaaagaa cggactgagg tgatcctgca gggcacagcg aaccccaatg
     1321 ccagtgcacc tgatgcagtg tgggaggact acgaattcaa gtgcaaacca ggggacccct
     1381 ggaggcggcc atgcctcatc tctccatacc actaccgcct ggactggcta atgtggttcg
     1441 cagctttcca gacctatgag caaaacgagt ggatcattca cctgacggga aagctcctag
     1501 ctgatgatgc tgaggccctg tccctactcg cccttaaccc ctttgagggt agggctcccc
     1561 ccaggtggat ccgaggagag cactaccgat acaagttcag cctccccggt ggccagcacg
     1621 ccgcccaggg caagtggtgg atacgcaagc gaattggtcc ttacttcccc ccactctgcc
     1681 tggaggatct gaaggaatac tttaagactc gggagtggcc actgccagag cccccatcta
     1741 gacacaccct gaaataaaga ccagagaccg ctcttccacc tgtactttgt gctgtggcca
     1801 cgggacccac acagtgacca ggcagcccat gggtcctgcc aagaagaggt ttgaaaaagg
     1861 tcgtgcttcc cagctgtcag cctcctacct ctgtctgtcc ctgtcacctt gctatccctt
     1921 ccccgttgtg gaaagaagag ccagccagcc ccatgcattg catgtgacca cacagtggag
     1981 ttccatgggc accagacctc ccctttagct gcaggacagc aggtcctcac cgtcttctac
     2041 gtcacaggca gctgttgttg taaaaatata aaaataaaaa agtaaggggc tggggattta
     2101 gctcagtggt agagcgctta cctaggaagc acaaggccct gggttcggtc cc
//
