LOCUS       NM_001109177            3569 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus LMBR1 domain containing 2 (Lmbrd2), mRNA.
ACCESSION   NM_001109177 XM_001057334 XM_574861
VERSION     NM_001109177.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3569)
  AUTHORS   Paek J, Kalocsay M, Staus DP, Wingler L, Pascolutti R, Paulo JA,
            Gygi SP and Kruse AC.
  TITLE     Multidimensional Tracking of GPCR Signaling via
            Peroxidase-Catalyzed Proximity Labeling
  JOURNAL   Cell 169 (2), 338-349 (2017)
   PUBMED   28388415
REFERENCE   2  (bases 1 to 3569)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474048.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001057334.1, XM_574861.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132262,
                              SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3569
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q16"
     gene            1..3569
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /note="LMBR1 domain containing 2"
                     /db_xref="GeneID:499539"
                     /db_xref="RGD:1563920"
     exon            1..193
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            194..430
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     CDS             257..2341
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /note="LMBR1 domain-containing protein 2"
                     /codon_start=1
                     /product="G-protein coupled receptor-associated protein
                     LMBRD2"
                     /protein_id="NP_001102647.1"
                     /db_xref="GeneID:499539"
                     /db_xref="RGD:1563920"
                     /translation="MSGAALGLEIVFVFFLALFLLHRYGDFKKQHRLVIVGTLLAWYL
                     CFLIVFILPLDVSTTIYNRCRHAAANSSPPENSNVTGVYASVTPAQRQHPCFKPWSYI
                     PDGIMPIFWRVVYWTSQFLTWILLPFMQSYARSGGFSITGKIKTALIENAIYYGTYLL
                     IFGAFLIYVAVNPRLHLEWNQLQTIGIAAANTWGLFLLVLLLGYGLVEIPRSYWNGAK
                     RGYLLMKTYFKAAKLMTEKADAEENLEDVMEEVRKVNESIKYNHPLRKCVDTILKKCP
                     TDYQEKMGRNMDDYEDFDEKRNTYPSEKSLVKLHKQVIYSVQRHRRTQVQWQILLEQA
                     FYLEDVAKNETSATHQFVHTFQSPEPENRFIQYFYNPTVEWYWECLLRPWFHRILAVV
                     LSIFSVIVVWSECTFFSTTPVLSLFAVFIQLAEKTYNYIYIEIACFLSIFFLSICVYS
                     TVFRIRVFNYYYLASHHQTDAYSLLFSGMLFCRLTPPLCLNFLGLTHMDASISHQNTQ
                     PTAYTSIMGSMKVLSFIADGFYIYYPMLVVILCIATYFSLGTRCLNLLGFQQFMGDND
                     MTSDLVDEGKELIRREKRKRQRQEEGENRRREWKERYGHNREDSTRNRNVHSDPKESN
                     FSDTTTNWSSKYTRANNRTERDRIELLQDAEPLDFNAETFTDDSLEPESGRYQPGGRY
                     LSMSSSIIFEDI"
     exon            431..528
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            529..624
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            625..792
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            793..1003
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1078
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            1079..1192
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            1193..1376
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            1377..1558
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            1559..1692
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            1693..1798
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            1799..1896
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            1897..2000
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            2001..2047
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            2048..2153
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            2154..2280
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
     exon            2281..3569
                     /gene="Lmbrd2"
                     /gene_synonym="RGD1563920"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgggtggagc tccgactgac tgggaaatgt cagtcgattg actgggagcg ggttttcctt
       61 ttcccggagc ccacaggcct tcgggtgacc accgccacgg tcgcccgaga ctgaaggatc
      121 cctgaccccg gcagactacg gcggacgcga agcttccgag ttccttccag acgctgtctg
      181 gcgaggtctg acgtgaacag atatggtcca gaactctcca tgaatccgct tggttggaga
      241 ttgtgaacat tcaataatga gcggtgcagc tttaggactg gagattgttt ttgtcttttt
      301 tctggcattg ttcctccttc atcgatatgg ggactttaag aagcagcata gacttgtaat
      361 cgtcggaaca ctgcttgctt ggtatctctg ctttcttatt gtcttcatac tgccgctgga
      421 tgttagtacg acaatatata accgatgcag gcatgctgct gcaaattcca gccctcctga
      481 aaatagcaat gttacgggag tgtatgcatc tgtcactcca gctcaaagac agcatccatg
      541 tttcaagcca tggagttaca ttccagatgg aatcatgcca attttctgga gggtagttta
      601 ttggacatca cagtttttaa cgtggattct gttacctttc atgcaatcat atgcaagatc
      661 tggaggtttt tccatcaccg gaaagataaa aacagccctg attgagaatg caatctacta
      721 tggcacttac ttactgatat ttggagcatt tctaatttat gtagctgtaa acccacgttt
      781 gcatttagaa tggaaccaac ttcagactat tggaatagct gctgccaaca catggggtct
      841 gtttctcctc gtgttattat tggggtatgg cttggtggaa attcctaggt catactggaa
      901 tggagccaaa aggggttatc ttcttatgaa gacttatttt aaggcagcca aactgatgac
      961 agagaaagca gacgcagaag aaaatttgga ggatgtaatg gaggaggttc gtaaagtaaa
     1021 tgagagcatc aagtataacc acccattgag gaaatgtgtt gatacaatac ttaaaaagtg
     1081 ccctacagat tatcaggaaa agatgggtag gaatatggat gattatgaag attttgacga
     1141 aaagcgtaat acctacccaa gtgaaaaaag tttggtaaaa ttgcacaaac aggtgattta
     1201 ctcagttcaa aggcaccgtc ggactcaagt gcagtggcag attcttttgg aacaggcatt
     1261 ctatctagaa gatgtagcaa aaaatgaaac tagcgcaact caccaattcg ttcacacttt
     1321 tcagtcacct gagccagaaa atcgatttat ccaatatttt tataatccta cagttgaatg
     1381 gtactgggaa tgccttttac gtccatggtt tcacaggata cttgctgtgg ttttgtctat
     1441 cttctctgtg attgttgtgt ggtcagagtg taccttcttt agcacaactc ctgtcttatc
     1501 cctttttgcg gtatttatac agctggcaga aaaaacatac aattatattt atattgagat
     1561 tgcttgcttc ctttccattt tctttttaag tatctgtgtt tattctactg tgttcaggat
     1621 tcgcgtattt aactactact acttggcttc acatcatcag accgatgctt acagtcttct
     1681 tttcagcggc atgttatttt gccgtctgac tcctcctttg tgtcttaact tcttgggatt
     1741 gacccatatg gacgcatcca tctctcacca gaatacccag ccaactgcat atacatctat
     1801 catgggttcc atgaaagttt tatcctttat tgcagatgga ttctatatat attatcctat
     1861 gttggtagta attctctgca ttgctaccta ttttagtttg ggcacccgct gtttgaatct
     1921 gcttggtttc cagcagttca tgggagataa tgatatgaca tcagatctag ttgatgaagg
     1981 aaaagaatta atcagacgag agaaaagaaa aaggcaaagg caagaggaag gtgaaaatcg
     2041 aagaagagag tggaaagaac gatatggaca caacagagag gattccactc ggaacagaaa
     2101 tgttcactct gaccccaaag agtccaattt ctcagacact actaccaatt ggtcatccaa
     2161 atacaccagg gctaataaca ggactgaaag agaccgaata gaacttctcc aggatgcaga
     2221 gcctctggac tttaatgcag aaacctttac tgatgattct ctggaacctg agtcaggaag
     2281 gtatcaacct ggtggacgat atctctctat gtcttccagc ataatatttg aagatatcta
     2341 acgtctgcag taattcatgg atcaagtaac caaggtcaac gcatcagctc agcctttatg
     2401 aacatccttg tgccctgcat tccctctgta ctctctataa acagtgtgaa gatagcagag
     2461 acagcattga acatcgatcc catccttgtg ccctgcattc cctctgtact ctgtataaac
     2521 agtgtgaaga tagcagagac agcattgaac atcgatccca tcttagcagt accaggctgt
     2581 ggtttgttgt tagagcgtca tcttttctga taggcttgat ggataccatc tgaagcgtct
     2641 gccttagtgt agttacgtgg aaggatccaa ctcatgataa acgtggagct cccttggttt
     2701 catgctaatt tttttaggag agttatttta aagttcaatg aagccataag tcatactaaa
     2761 ttctaaattt tataagtgta atttaaattt ttactgcttc tttaaaaatg ttcaacttac
     2821 attttccaaa gaactgaaag tgaactgaga cctcagataa ctaccatatc cactaaactc
     2881 atgtcttaaa acaaggctta tgtgtcacac ataactgaat gtaaacagtt cttcttctga
     2941 cctgtatact ctcctgtggg attgcgcatg tataattaag atgattctcc agttgatagt
     3001 gttagtgtct ttagcatgtg tattctaatt gggtgatgtg ttactctttt ctgtctttgt
     3061 aataactgga tctttttatg gttttgatat tattgctttg taaaagattt tcatttcaga
     3121 gaaaaatatt catctttaac atttagaata ttgacctcat gctaatcagt ccatccaaga
     3181 aaaatcctaa ctatcaatga tgaatagatt tgtctgtttt atagccaaga gttccccaaa
     3241 ttctctaata tttacttttc tttttttaag atttatttta tttatgagta cactgtagct
     3301 gtcttcagat acaccagaag agggcatcag atcccatcac agatggttgt gagccaccat
     3361 gtggttgctg ggaattgaac tcaggacctc tggaagagca ttcagtgctc tttaccgctg
     3421 agccatctct caattctcta atatttaaaa ggtgcctgtt aatgtacctt gtaaagaaaa
     3481 catctggctg ttttggctat ccaatggtaa aaagaaaaat gatccattta tgagtgttgc
     3541 taacccttaa attgtagctt agaaaaaaa
//
