LOCUS       NM_001395729            2124 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus limb development membrane protein 1-like
            (Lmbr1l), transcript variant 1, mRNA.
ACCESSION   NM_001395729 XM_008765699
VERSION     NM_001395729.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Choi,J.H., Zhong,X., McAlpine,W., Liao,T.C., Zhang,D., Fang,B.,
            Russell,J., Ludwig,S., Nair-Gill,E., Zhang,Z., Wang,K.W.,
            Misawa,T., Zhan,X., Choi,M., Wang,T., Li,X., Tang,M., Sun,Q.,
            Yu,L., Murray,A.R., Moresco,E.M.Y. and Beutler,B.
  TITLE     LMBR1L regulates lymphopoiesis through Wnt/beta-catenin signaling
  JOURNAL   Science 364 (6440) (2019)
   PUBMED   31073040
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Fluckinger,M., Merschak,P., Hermann,M., Haertle,T. and Redl,B.
  TITLE     Lipocalin-interacting-membrane-receptor (LIMR) mediates cellular
            internalization of beta-lactoglobulin
  JOURNAL   Biochim Biophys Acta 1778 (1), 342-347 (2008)
   PUBMED   17991420
REFERENCE   3  (bases 1 to 2124)
  AUTHORS   Wojnar,P., Lechner,M. and Redl,B.
  TITLE     Antisense down-regulation of lipocalin-interacting membrane
            receptor expression inhibits cellular internalization of
            lipocalin-1 in human NT2 cells
  JOURNAL   J Biol Chem 278 (18), 16209-16215 (2003)
   PUBMED   12591932
REFERENCE   4  (bases 1 to 2124)
  AUTHORS   Wojnar,P., Lechner,M., Merschak,P. and Redl,B.
  TITLE     Molecular cloning of a novel lipocalin-1 interacting human cell
            membrane receptor using phage display
  JOURNAL   J Biol Chem 276 (23), 20206-20212 (2001)
   PUBMED   11287427
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Aug 3, 2021 this sequence version replaced XM_008765699.3.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643290.27714.1,
                                           SRR26360194.2197987.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-207               JAXUCZ010000007.1  131955118-131955324 c
            208-292             JAXUCZ010000007.1  131952152-131952236 c
            293-326             JAXUCZ010000007.1  131950878-131950911 c
            327-466             JAXUCZ010000007.1  131949747-131949886 c
            467-570             JAXUCZ010000007.1  131949503-131949606 c
            571-697             JAXUCZ010000007.1  131948830-131948956 c
            698-766             JAXUCZ010000007.1  131946647-131946715 c
            767-831             JAXUCZ010000007.1  131946452-131946516 c
            832-904             JAXUCZ010000007.1  131946026-131946098 c
            905-988             JAXUCZ010000007.1  131945859-131945942 c
            989-1065            JAXUCZ010000007.1  131945703-131945779 c
            1066-1143           JAXUCZ010000007.1  131945058-131945135 c
            1144-1217           JAXUCZ010000007.1  131944712-131944785 c
            1218-1308           JAXUCZ010000007.1  131943195-131943285 c
            1309-1375           JAXUCZ010000007.1  131942904-131942970 c
            1376-1537           JAXUCZ010000007.1  131941655-131941816 c
            1538-2124           JAXUCZ010000007.1  131940081-131940667 c
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..2124
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /note="limb development membrane protein 1-like"
                     /db_xref="GeneID:300215"
                     /db_xref="RGD:1309631"
     exon            1..207
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     CDS             136..1605
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /note="isoform 1 is encoded by transcript variant 1; limb
                     region 1-like homolog; limb region 1 like"
                     /codon_start=1
                     /product="protein LMBR1L isoform 1"
                     /protein_id="NP_001382658.1"
                     /db_xref="GeneID:300215"
                     /db_xref="RGD:1309631"
                     /translation="MEAADYEVLSVREQLFHDRVRECIISILLFATLYILCHIFLTRF
                     KKPAEFTTVDDEDATVNKIALELCTFTLAVALGAVLLLPFSIISNEVLLSLPRNYYIQ
                     WLNGSLIHGLWNLVFLFSNLSLVFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLIL
                     LTLLVLGMVWVASAIVDNDKASRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLA
                     RMFSVTGKLLVKPRLLEDLEEQLNCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLA
                     LQAQRVLLEKRRKASAWQRNLGYPLAMLCLLVLTGLSVLIVAVHILELLIDEAAMPRG
                     MQDAALGQVSFSKLGSFGAIIQVVLIFYLMVSSVVGFYSSPLFGSLRPRWHDTSMTQI
                     IGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFNWLGNFYIVFLYNAAFAGLTTLC
                     LVKTFTAAVRAELIRAFGLDRLPLPVSGFPRGSRKKQHQ"
     exon            208..292
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            293..326
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            327..466
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            467..570
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            571..697
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            698..766
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            767..831
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            832..904
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            905..988
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            989..1065
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            1066..1143
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1217
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            1218..1308
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            1309..1375
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            1376..1537
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
     exon            1538..2124
                     /gene="Lmbr1l"
                     /gene_synonym="RGD1309631"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagtttccgt cacgggcagc gaggcgcagc tcctaggctg ggtccgggtg cttggcgggg
       61 ggcggcggcg gcctcatccc cgctcgtcct ccccgggccc ggagacaccc ccgccccagt
      121 catgctgagc agagtatgga agcagctgac tacgaagtgc tatccgtgcg agagcagctg
      181 ttccacgata gggtccgcga gtgcatcatc tcaatacttc tgtttgcaac actctacatc
      241 ctctgccaca tcttcctgac ccgcttcaag aagcctgctg agttcaccac agtggatgat
      301 gaagacgcca cagttaacaa gattgcgctg gagctgtgca cttttaccct ggcagtcgcc
      361 ctgggcgctg tcttactctt gcccttctcc atcatcagca atgaggtgct actctcactg
      421 ccacgcaact actacatcca gtggctcaat ggctccctca tccatggtct ttggaacctc
      481 gttttcctgt tctccaatct gtccctcgtc ttccttatgc cctttgcata tttcttcaca
      541 gagtctgaag gctttgctgg ctccagaaag ggtgtcctgg gccgggtcta cgagacagtg
      601 gtgatgttga tactcctcac tctgcttgtg ctgggcatgg tgtgggtggc atcagccatt
      661 gtagacaatg acaaggccag cagggagtca ctctatgact tctgggagta ctacctcccc
      721 tatctctact cctgtatctc cttcctcgga gtcctgctgc ttctggtgtg cactccacta
      781 ggtctcgccc gcatgttctc cgtcactggg aagttgctgg tcaagccccg gctactggaa
      841 gacctggaag aacagctgaa ctgctcagcc tttgaggagg cagctctgac tcgaagaatc
      901 tgcaatccca catcctgctg gctgccgctg gacatggagc tgctgcatag acaggtcctg
      961 gctctgcagg cgcagagggt cctcctggaa aagcggcgga aggcgtcagc ctggcagcgg
     1021 aacctgggct accctctggc catgctgtgc ttgctggtgc tgacgggcct gtctgtgctc
     1081 attgtggctg tccacatcct ggagctgctc attgacgagg ctgccatgcc gcggggcatg
     1141 caggatgctg ccctgggcca ggtctccttc tccaaactgg ggtcctttgg tgccatcatc
     1201 caggtcgtgc tgatctttta tctgatggtg tcctcggtag tgggcttcta cagctctcca
     1261 ctcttcggaa gcctgagacc tagatggcat gacacatcta tgacacagat aattgggaac
     1321 tgtgtctgtc tcctggtcct cagctcagca cttcctgtct tttctcgaac ccttgggctg
     1381 acacgctttg acctgctggg tgactttgga cgcttcaact ggctaggcaa tttctacatc
     1441 gtgttcctct acaatgcagc ctttgctggt ctcaccacac tctgtctggt gaagaccttc
     1501 actgcagctg tgagggcaga gctgatccga gcctttgggc tggacagact gccgctgcct
     1561 gtctctggtt tcccccgagg ttctaggaag aagcagcatc aatgacctcc agctgggggt
     1621 tgagaaggag aaaactaggc actgcctagg cctggaggag agccctaagt ggctggacct
     1681 caggacctgg aatctgagag ggtgggtgac agaggggacg gaccatctgc actgttgctt
     1741 aatctgagcc agagtttggg acctggcccg gcctcctgcc tttccagatg tagctgtggc
     1801 ctgagtgttg gagctcgggg cttgctttag ttcctggtcc cagatacgtt tacacatcta
     1861 tctgcctcaa tcctgctcca ggccatgcct gaagccatgt ttacatgatt tgacgtgcaa
     1921 tagggtgggt gggagtcggg gggctgggca ggggtgggtt ctggacacag gttgtcttcc
     1981 ttgcctctgg cccaggagag ccgaagcact gtgctgtcct gtggagggag ggcgtggacc
     2041 actggagaga ccaagggtgc ggggaggagg ctgcacccat gagcaataaa gttgatccca
     2101 gggttttctt cgttcttttg taaa
//
