LOCUS       NM_001402076            2210 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus lectin, mannose-binding 2-like (Lman2l), mRNA.
ACCESSION   NM_001402076
VERSION     NM_001402076.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Neve,E.P., Svensson,K., Fuxe,J. and Pettersson,R.F.
  TITLE     VIPL, a VIP36-like membrane protein with a putative function in the
            export of glycoproteins from the endoplasmic reticulum
  JOURNAL   Exp Cell Res 288 (1), 70-83 (2003)
   PUBMED   12878160
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Nufer,O., Mitrovic,S. and Hauri,H.P.
  TITLE     Profile-based data base scanning for animal L-type lectins and
            characterization of VIPL, a novel VIP36-like endoplasmic reticulum
            protein
  JOURNAL   J Biol Chem 278 (18), 15886-15896 (2003)
   PUBMED   12609988
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.733813.1,
                                           SRR26360186.1681280.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-212               JAXUCZ010000009.1  46180914-46181125   c
            213-331             JAXUCZ010000009.1  46179422-46179540   c
            332-449             JAXUCZ010000009.1  46176024-46176141   c
            450-532             JAXUCZ010000009.1  46175186-46175268   c
            533-694             JAXUCZ010000009.1  46162707-46162868   c
            695-809             JAXUCZ010000009.1  46162513-46162627   c
            810-929             JAXUCZ010000009.1  46159198-46159317   c
            930-2210            JAXUCZ010000009.1  46157596-46158876   c
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q21"
     gene            1..2210
                     /gene="Lman2l"
                     /note="lectin, mannose-binding 2-like"
                     /db_xref="GeneID:301343"
                     /db_xref="RGD:1311393"
     exon            1..212
                     /gene="Lman2l"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..1072
                     /gene="Lman2l"
                     /note="VIP36-like protein"
                     /codon_start=1
                     /product="VIP36-like protein precursor"
                     /protein_id="NP_001389005.1"
                     /db_xref="GeneID:301343"
                     /db_xref="RGD:1311393"
                     /translation="MAAAPRPSWWQRWRRRAWARDGARLLLFLLLLGSGSGPGPLHVR
                     AGQAVEYLKREHSLSKPYQGVGTSSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNR
                     VPCFLKDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVD
                     TYPNEEKQHERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNIRYDTFLVIRY
                     VKRHLTIMMDIDGRHEWRDCIEMPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELT
                     GVRTPEEEKLHRDVFLPSVDNLKLPEMTEPPTPLSGLALFLIVFFSLVFSVFAIVIGI
                     ILYNKWQDHSRKRFY"
     exon            213..331
                     /gene="Lman2l"
                     /inference="alignment:Splign:2.1.0"
     exon            332..449
                     /gene="Lman2l"
                     /inference="alignment:Splign:2.1.0"
     exon            450..532
                     /gene="Lman2l"
                     /inference="alignment:Splign:2.1.0"
     exon            533..694
                     /gene="Lman2l"
                     /inference="alignment:Splign:2.1.0"
     exon            695..809
                     /gene="Lman2l"
                     /inference="alignment:Splign:2.1.0"
     exon            810..929
                     /gene="Lman2l"
                     /inference="alignment:Splign:2.1.0"
     exon            930..2210
                     /gene="Lman2l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaagggccg gcggtgggaa agatggcggc ggctccaaga ccctcctggt ggcagcggtg
       61 gcggcggcgc gcgtgggctc gggacggggc caggcttttg ctctttctcc ttctgttggg
      121 gtctgggtct gggccggggc cgctgcatgt cagggcgggt caagcggtgg aatacttgaa
      181 acgggagcac tcgctgtcga agccctacca gggtgtggga acaagcagtt cttcgctgtg
      241 gaacctgatg ggcaacgcca tggtgatgac gcagtatatc cgcctcactc cagatatgca
      301 aagtaaacag ggtgccttgt ggaaccgggt gccatgtttc ctgaaagact gggaactgca
      361 ggtgcacttc aagatccacg gccaagggaa gaagaatctg catggagacg gcttggcaat
      421 ctggtacaca aaggaccgaa tgcagccagg gcctgtgttt ggaaacatgg acaaatttgt
      481 ggggctgggg gtgtttgtag acacctatcc caatgaggag aagcagcacg agcgggtatt
      541 cccctacatc tcagccatgg tgaacaacgg ctccctcagc tatgatcatg agcgggacgg
      601 gcggcccacg gagctggggg gctgcacagc cattgtccga aatatccgtt atgacacctt
      661 ccttgtgatt cgctatgtca agaggcatct gacgataatg atggacatcg atggccgaca
      721 tgagtggagg gactgcatcg agatgcctgg ggtgcggctc ccccggggct attacttcgg
      781 cacatcctcc atcactgggg atctctctga taaccatgat gtcatttccc tgaagttgtt
      841 tgagctgact ggagtaagga ccccagaaga agaaaagcta catcgagacg tgttcctgcc
      901 ctcagtggac aatctgaagc tgccggagat gacagaacca ccaacgcccc tgagtgggct
      961 ggctctcttc cttattgtat ttttctcctt ggtgttttcc gtattcgcca ttgtcattgg
     1021 gatcatactc tacaacaaat ggcaggacca cagccggaaa cgcttctact gagcccactg
     1081 ctgtcagccc ctccacagcc atgaggtgtg ggtgtgagca cacagcctgt tgttcaggga
     1141 ccctgcatcc tcatggtcgt acacggggac atctcactgg cccaggctac caccctcggg
     1201 gccaagcagc tgtggtgtgc ctttccttgg agtccttcca cttaggggtg aagagacatg
     1261 gatggagcac tatctattgt gatgcctaca ctacagaatg aggccggcag cccaggcgca
     1321 gactggatac agcaggcctc ccactgcatt ttaaaattac caagtagaaa accagaactt
     1381 ataccctctg gaaactcgct tactagattt tgcgtttgct cacacctctt tctacttcag
     1441 gaactccttg gcaacctgga tggagactct cccgcacctg cctgtctccc tccactcacc
     1501 atcctcttta tctacatcct cagctaggga agcagcctgc tgcttacatc aggcagccct
     1561 gtgtttcctg caatagctca ttgcttcagc ctcttctctg ctgggtggac cttgtttctg
     1621 aatgttgctg ggtcttcagc ttccttgcca gcccttcagg cctttggatg gtttggctaa
     1681 acgttgttac aaatcgagag atgcgtggac aattcacaga tgtgaggtta actgtgaaat
     1741 catcccggtc caggcgtgcc tcagagctat tggctgcatc tgaccatgtg gagtttctcg
     1801 acttgctgga ccctgcttag tcgcatgctt tgtgtttgtc ctgattcttg ggatcctgct
     1861 ttgaatgttg gaagtgaaat gcagctttct tcttattccc tggacttgga cacacccctg
     1921 agacatttgg cctctcaatg agaagaaaca gttggtgatc tcacgttaca aatctctgag
     1981 agcgaaagcc cttcatcctc tgtgcctgga aaagctctgg tcatcgagca gcagcacagc
     2041 ttgagtggcc ttgtgtgtca cctactacac tgccttattc tacgagtgtc acatgctgct
     2101 cacctatccg ccctgtggtt aaattggtta caggctagtc tccatggagg gcctgacaca
     2161 gttctctgta gcctgaggaa aagtcttcat aaagtagccg atggaaccaa
//
