LOCUS       NM_001012465            1587 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus lectin, mannose-binding, 1 like (Lman1l), mRNA.
ACCESSION   NM_001012465 XM_217166
VERSION     NM_001012465.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Sakulsak,N., Wakayama,T., Hipkaeo,W., Yamamoto,M. and Iseki,S.
  TITLE     Cloning and characterization of a novel animal lectin expressed in
            the rat sublingual gland
  JOURNAL   J Histochem Cytochem 53 (11), 1335-1343 (2005)
   PUBMED   15923361
  REMARK    GeneRIF: rat SLAMP plays a specific role in the early secretory
            pathway of glycoproteins in specific types of mucous cells
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001012465.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB188302.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA5760475,
                                           SAMEA5760476 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-203               JAXUCZ010000008.1  66919382-66919584   c
            204-358             JAXUCZ010000008.1  66915333-66915487   c
            359-466             JAXUCZ010000008.1  66915127-66915234   c
            467-525             JAXUCZ010000008.1  66914963-66915021   c
            526-625             JAXUCZ010000008.1  66913426-66913525   c
            626-746             JAXUCZ010000008.1  66912934-66913054   c
            747-802             JAXUCZ010000008.1  66911954-66912009   c
            803-935             JAXUCZ010000008.1  66911118-66911250   c
            936-1087            JAXUCZ010000008.1  66910387-66910538   c
            1088-1155           JAXUCZ010000008.1  66909326-66909393   c
            1156-1279           JAXUCZ010000008.1  66908521-66908644   c
            1280-1407           JAXUCZ010000008.1  66907802-66907929   c
            1408-1587           JAXUCZ010000008.1  66906742-66906921   c
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..1587
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /note="lectin, mannose-binding, 1 like"
                     /db_xref="GeneID:300743"
                     /db_xref="RGD:1310538"
     exon            1..203
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..1537
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /note="sublingual acinar membrane protein; ERGIC-53-like
                     protein; complexin III; LMAN1-like protein; ERGIC53-like
                     protein; protein ERGIC-53-like"
                     /codon_start=1
                     /product="protein ERGIC-53-like precursor"
                     /protein_id="NP_001012483.2"
                     /db_xref="GeneID:300743"
                     /db_xref="RGD:1310538"
                     /translation="MLKTGGLSPSLCLLSLLLALHSAERSYPPPQRRFEYKLSFKGPR
                     LAVPGAGIPFWSHHGDAIPGLEEVRLVPSMKNRSGAVWSEISVSFPSWEVEMQMRVTG
                     PGRRGALGVAMWYTKDRDQVGSVVEGLASWDGIGIYFDSSSNDVQNGPAIRVLASDGH
                     DLQEQFGDGTVRELGSCLRDFRNRPHPFRARITYWRQRLRVSLSGGLTPNDPEEVCVD
                     VEPLLLAPGGFFGVSAATSTLADDHDVLSFLTFSLRDPGSEEALQPFTEKEQFHLARK
                     LEELKARLALGTREDTILPLNSKAQEEGERFFNLEDTLSRQSQILQALQALSRQMDQA
                     EKQWKQQLGSVVQIRPEGGWNTAKVSTLLYGQRTLIQALQEMREAAAQMASGAHVFYL
                     PVGTKHHFFELDQTLGLLQKDLRDLVKMTAKPPRPSGWLPGSSTCLRTSIFLFFLLIQ
                     TVGFFCYMNFRQELDKRLQEYLFTESISLQPALPIPRTIGVLRRQPVSPSMQA"
     exon            204..358
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            359..466
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            467..525
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            526..625
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            626..746
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            747..802
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            803..935
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            936..1087
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            1088..1155
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            1156..1279
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            1280..1407
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
     exon            1408..1587
                     /gene="Lman1l"
                     /gene_synonym="slamp"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgcccagaa accagctcct ttgcaatgct gaagacagga ggcctctcac cttccctctg
       61 cctcctttcc ctcctgctgg ctctgcatag tgctgaaagg agttaccccc ctcctcaacg
      121 caggtttgag tacaagctca gcttcaaggg accaagactg gcagttcctg gagctggaat
      181 tcccttctgg agccaccatg gagacgccat tccaggccta gaggaagtac ggctggttcc
      241 atctatgaag aaccggagcg gtgccgtgtg gagtgagatc tctgtctcct tcccttcctg
      301 ggaagtagag atgcagatga gagtgacagg accgggacgc cggggagccc tgggtgtggc
      361 catgtggtac accaaggaca gagatcaagt tggctctgtt gtggagggac tggcctcatg
      421 ggatggcatt gggatctact ttgattcctc ctccaatgat gtccagaacg gtcctgccat
      481 ccgagtgctg gccagtgatg ggcatgacct ccaggagcag tttggggatg gaactgtccg
      541 ggagcttggc tcctgtctta gggacttcag gaaccggcca caccccttcc gagctcggat
      601 cacctactgg aggcagaggc tgcgtgtgtc cttgagtgga ggccttactc ctaatgaccc
      661 tgaagaggtc tgtgtcgatg tggagcccct gcttttagcc cctggaggct tttttggggt
      721 ctcagcagcc accagtacct tagcagatga ccatgacgtc ctgtccttcc tgaccttcag
      781 tttgagggac ccaggttcag aggaagccct ccagccattc acagagaagg agcagttcca
      841 cctggccagg aagctggaag aactgaaggc aaggctggcc ctgggtacca gagaggatac
      901 catactacca ctgaactcca aagcccagga agaaggggaa aggttcttta acctggagga
      961 tacactgagc agacaaagcc agatcctgca ggccctccag gctctctcca ggcagatgga
     1021 ccaggctgag aaacagtgga aacagcagtt ggggtctgtg gtccaaatcc ggcctgaggg
     1081 aggctggaac actgccaagg tcagcaccct gctctatgga cagcggactc tgatccaggc
     1141 tctgcaagag atgagggaag cagctgccca gatggcttca ggagcacacg tcttctacct
     1201 gcctgtgggc actaaacatc acttttttga gctggaccag accctcggcc tcctgcagaa
     1261 ggacctccgg gatctggtga aaatgacagc caagcctccc cgcccatctg gctggctccc
     1321 aggatcctcc acatgtctgc ggaccagcat cttcctgttc ttcctcctaa tccagactgt
     1381 aggcttcttc tgctacatga acttcaggca ggagctggac aagaggcttc aggagtacct
     1441 gttcacagaa agcatttctc tacagcctgc attgcccatc cctaggacaa taggggttct
     1501 gaggagacag cctgtctccc ccagcatgca agcctgaccc agctcaaagc catgaggaaa
     1561 aaaaaatggg ggatagagga tttagcc
//
