LOCUS       NM_001134464            1102 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus LLP homolog, long-term synaptic facilitation
            factor (Llph), mRNA.
ACCESSION   NM_001134464 XM_001081031 XM_216898
VERSION     NM_001134464.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Yu,N.K., Kim,H.F., Shim,J., Kim,S., Kim,D.W., Kwak,C., Sim,S.E.,
            Choi,J.H., Ahn,S., Yoo,J., Choi,S.L., Jang,D.J., Lim,C.S.,
            Lee,Y.S., Kang,C., Choi,S.Y. and Kaang,B.K.
  TITLE     A transducible nuclear/nucleolar protein, mLLP, regulates neuronal
            morphogenesis and synaptic transmission
  JOURNAL   Sci Rep 6, 22892 (2016)
   PUBMED   26961175
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 1102)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 1102)
  AUTHORS   Ohta,S., Bukowski-Wills,J.C., Sanchez-Pulido,L., Alves Fde,L.,
            Wood,L., Chen,Z.A., Platani,M., Fischer,L., Hudson,D.F.,
            Ponting,C.P., Fukagawa,T., Earnshaw,W.C. and Rappsilber,J.
  TITLE     The protein composition of mitotic chromosomes determined using
            multiclassifier combinatorial proteomics
  JOURNAL   Cell 142 (5), 810-821 (2010)
   PUBMED   20813266
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158738.1.
            
            On Aug 31, 2012 this sequence version replaced NM_001134464.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158738.1, BE102840.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1102              BC158738.1         3-1104
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..1102
                     /gene="Llph"
                     /gene_synonym="RGD1308261"
                     /note="LLP homolog, long-term synaptic facilitation
                     factor"
                     /db_xref="GeneID:299818"
                     /db_xref="RGD:1308261"
     exon            1..221
                     /gene="Llph"
                     /gene_synonym="RGD1308261"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..391
                     /gene="Llph"
                     /gene_synonym="RGD1308261"
                     /note="LLP homolog, long-term synaptic facilitation
                     (Aplysia)"
                     /codon_start=1
                     /product="protein LLP homolog"
                     /protein_id="NP_001127936.1"
                     /db_xref="GeneID:299818"
                     /db_xref="RGD:1308261"
                     /translation="MAKSLRSKWKRKMRAEKRKKNAPRELNRLKSILKVDGDALMKDV
                     EEIATVVVPKHYQEKMQCDVAVDDEKDDMKMETEIKRNKKTLLDQHGQYPVWMNQRQR
                     KRLKAKREKKRGKSKAKAAKGLAW"
     exon            222..1077
                     /gene="Llph"
                     /gene_synonym="RGD1308261"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggcaaagc atggctaaaa gcttgcggag taagtggaaa aggaagatgc gcgctgagaa
       61 gagaaagaag aatgcgccaa gggaacttaa cagactcaaa agtatcctca aagttgacgg
      121 cgatgcttta atgaaagatg ttgaagaaat agccactgtg gtggtaccca aacattacca
      181 ggagaaaatg cagtgtgatg tcgctgtgga tgatgaaaag gatgacatga aaatggaaac
      241 tgaaattaag agaaacaaaa agactcttct agaccagcat ggccagtacc cagtatggat
      301 gaaccagagg caaagaaaaa gactgaaggc caagagagaa aagaaacggg ggaaaagcaa
      361 agcaaaggcc gccaagggcc tggcctggta gactcttaaa gactggaaag ggaggcagac
      421 gtgctggtgc acccctttaa cccccgcgct cagggggcgg aggcaggtgg atctctgaat
      481 tcggggccag cctggtctac agagtaactc tagagaaacc ctgtcttgaa aaaaacaacc
      541 aaacaaacaa aaatccagaa gctatttgtt ttcatatttt agtttgaact tagttctata
      601 attcaaagcc aaaataactc cttcgttttg ggaacttgaa taaaatgtct ttgataaaag
      661 gttacgtgaa gttgtgattg gatactgcct gatatggagt attgtgagac acctcaatct
      721 tgtgagcatg agtctagtta tttgatgtta caaaatggcc attatactta gtgcctcaga
      781 gtaagcgtac ttatatcaac agagtttgga cagaaagctt gagatcgtca tattaaaaaa
      841 atagggtatc aaggggctca ggaggactca acttctgttt gttgggtggg tgactgaaaa
      901 ccagctccca gggatgtgcc ctcttgtggc cttcactgtc accccctcat tcacatgcac
      961 aagcttccca cccactaata actgaaagtc tacaaaggac atcggtggac tttacaagtg
     1021 gtgcttactt gaattgctta tttttgataa ttcataataa actatatttt gtgtggaaaa
     1081 aaaaaaaaaa aaaaaaaaaa aa
//
