LOCUS       XM_008760354            6598 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus lipase, member O1 (Lipo1), transcript
            variant X2, mRNA.
ACCESSION   XM_008760354
VERSION     XM_008760354.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008760354.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008760354.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6598
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6598
                     /gene="Lipo1"
                     /note="lipase, member O1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:294097"
                     /db_xref="RGD:1565682"
     CDS             4864..6057
                     /gene="Lipo1"
                     /codon_start=1
                     /product="tear acid lipase-like protein"
                     /protein_id="XP_008758576.1"
                     /db_xref="GeneID:294097"
                     /db_xref="RGD:1565682"
                     /translation="MWWLLRTMCLIHVFGKIFCLLEPNKNPESHMNVSEIIKYWNYPS
                     LEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQHGLFSTPGVWVANPPDNSLAF
                     ILAEAGYDVWLGNSRGSTWAKKHVTLSPDSEEFWAFSFDQMIAYDLPATINFILNTTG
                     QEQIYYIGHSLGTLIALGAFSTNQELAEKIKLNILIAPVRTVKYVKGFGRLLAYFSPE
                     AFKLVFGKKEFLPTVVFSEYSKYVCNIKLVDAGCAGVLGSLTGFSEDQLNTSRIDVYI
                     THSLAGTSTQILIHAGQAIRSGEFQAYDWGSPSLNMQHYNQTTPPLYSVENMKVPTVM
                     FTGLKDFLADPKDVANLVPKIFNLIYHKTIPEFSHLDFIVGLNAKTEVSDEILTILGE
                     YDSSV"
ORIGIN      
        1 caccacctca ccgccatagt attcctcttc cgtgaggtat taagttttac aggaaactct
       61 cccattgaag ccatacaagg cagtcttgtc acatacttct tcattcacca tactatagtt
      121 ctatatcaat aaaataaact agcaaattgg tgtcggacat tcttagctcc agtgtcatcc
      181 gtgctaaaca gtgacctctc agacttaaga gaaaaacaca gaaggctctc tttaatctac
      241 tcatttaact cattttgatc acctatgcat acctggagat attaaataca cttcaacact
      301 aaataaatta attccattta atggagacat tcataataaa agcaatcaag ctactgttgc
      361 acactcgtca tcccagtatt cagaaagtcg aggcaggaga atgatgagtt ctagattctg
      421 catgtggctc tgaagacagt aaactttgct ctttgataag tttaagtctt acatatatca
      481 atctatatat ctcagttgtt ataagagtgg caacattagg ggttggggat ttagctcaat
      541 ggtagagcac ttgcctagga agcacaaggc cctgggttcg gtccccagct ccgaaaaaaa
      601 gaaaagaaaa gaaaaaaaaa gagtggcaac attatcctgt atcactcact ccttttagtt
      661 atatttgact aagttagcca agagcatggc attgtcccat gtctgaccct gtctgaaggt
      721 acatggggga ttttatttca ttattcacat ttctcacaat tccccctatt cctatctctg
      781 tcatacaaga ctctggcatc actactgttg atacatagtc ccacagaagc attgtggcag
      841 gatctttcat tcctcatggg gttattttga acatatataa aattctccta tatgttgata
      901 agcttttttg agtgtgttaa cctttgattt tagaagacga tgttggtaaa tctccacaat
      961 ctaaacgatg atcaatacta aaatgaattc attttctaat ctgcagtata gacaaagagt
     1021 tggcgaatta cttctgacat ataattccgt cctgtctaaa tttctgaaaa atatgaaaat
     1081 tgtgctacat actgaaaatt tccatttctt tttgttttac ctagactgtt attgaagatt
     1141 aaagacaagt ttttagaatg tacacttata gaaatatctt ggaaatgatt aagaagattg
     1201 agaatgaagt cagtctgtga taactacatt gattaggatg tccattcccc gtgtcccata
     1261 tttcccacca ccacccactg agcagtgtgc tggcagctat ggttagatct gagctcttgc
     1321 agacatgttc tctctctggt gctgcagcat aggagctccc tcactacaac cctggtagat
     1381 tatttgaagg gtgacagttg ggttttgaca aacccaaagg gaggatgaaa cattttagtc
     1441 tcactgtgtt tatctttgag gtgtgagcag ggtatcatat agagaaatag aacaaattct
     1501 gtaagacagt ttatgggagg aaataaaaag tattaccttg ttaattagat cgaatcgcta
     1561 atattgttta aaccttaagt ctttatcttt aataaaaatt ccagttgctg tattctgaaa
     1621 gtctaaaagt ccaaactgca caaaaatatg gcattttcac ttatgtaaag tgcctttgcg
     1681 atgaatagtg tccatgaaca gccacagata tccaaggcca gagtagctta aaaatatgtc
     1741 acatatgatg accagattaa tgttcatact gacaggccag agtactagat tttctactaa
     1801 ggaagacaga ttatgccatt ttatgggtga atacatggct tattttggcg ttcttcaaac
     1861 cttttttata aaccagatta tgggaacagg agaaagaact ttgacatgac ttactgtaat
     1921 atttcttata tgccattctt ttcttgataa atattaacta tcaatatgta tatagaacta
     1981 gtgtttggtg aagttaggca tatatattaa aacatagaca ggtctgtata taagaactag
     2041 gcacaatcat atagacatga tcaaattcta ttggaaaaaa atctaactat tggaaagcac
     2101 tcaagaaagg ttgattttaa taacaaacac tataagccct gtggcccaat aaagtatggg
     2161 tctcagatct tctatgtctt atttgcagga ataagtgtac gtgaccatag ttacccagga
     2221 actcactgca tagtgaagcc ctcaatgaac ctaggggtaa tcctctatct ttacctcctg
     2281 agtgtggcat gagctaccat gatcatttct tcatatacta ttttaaagat atagttagtt
     2341 cagccaaccc cattttaagt tttattgaac tctatggttt gctgaaacac tttaaactaa
     2401 acatgaaata ctgataatca aataatgagc tactatcagt ctctttgtaa catgggatgg
     2461 gatgtgtact gtattaactc aaagtgctgg ggggaaaaaa aggacagaaa agcaacttta
     2521 caagccagat aaattctctt caggattaag taagtcatta tctgaacagc tccctaccaa
     2581 tatgtgtatg aagaagatag agcaaaggca gagctgacgg ttactacagc agaagtcgaa
     2641 tcaattgtca tcataatcac ctttatcatc tgagaaatta tttttctgaa aatattttta
     2701 tcttaaaaga atatcagaac tctgaaggtt cttcctcatg cgaggagtct tcctcatgcg
     2761 agatctcaaa attaattcct gtgtctgtgc tgtaactgtg aacaccagcc taccagccat
     2821 agaccctggg tcacaggtca caatcaagta gtagcatacc atatgtgttt cctgctatca
     2881 cttctggctg tcatttccag ctatcatttc cggctatcat ttcctgctat catttcctgc
     2941 tatcaatatg ccagattctt tcccctggga gcatagggat agaaatttat gaagtaacaa
     3001 atttatatat tttgctggac aatggaattt atgttcccaa gatactattc cactttactc
     3061 tcatgtaacg tgagtatacg cttgcagatg ttttcacaac ctttttgtga tagtggtttg
     3121 tttttgtcat attgaaattt ttatgtatcc ctgatcgttt taaaacatcc ttgctacaca
     3181 tattttgtca tgtttatgat ctgaggatat catctcccaa atttatacac atgtcgctct
     3241 taacttaaga taatcacagg gggaaatgtc tttaaagagg cattgttggc agttgcaata
     3301 tttatcttga cttgttttgt aattctgtat agagcagctc tcaaatcatt cagtaaggaa
     3361 atatggttac aattactgtt ttgaggaaaa taaagcctga tgagttggtg tctaacttaa
     3421 aatctaaaga aatcttcaga attcacacta agggagggta ctgccaggca atgagcccag
     3481 agctgagaaa ccacgtaaat tttgagagct ttgcagtatt tgacatctga tttgacaagc
     3541 atccaagttc atgtttaaag ttggcactgt ccatttctag gaaaggtcat ccaaaaaaca
     3601 cattcaagct gtatttatag tgagcaggat ggaaagaaaa gagaattcaa atttcatttg
     3661 gaatacaaga aattaaaata attgtatttg gtaacagtga gtatgatact ctaagattgc
     3721 aaaatgtttt gctttaggtt caatattaaa acagcaatat gttagttagg tgtttattag
     3781 atggtattca gacagcgggc acaacatgaa ggctgacatt tacagtcctg attttattag
     3841 taagactatt tgaccaatac ctctctctct ctctctctct ctctctctct ctctctctct
     3901 ctctctctct ctctctcttt ctctctctct ctctctctct ctctctctct ctctctttct
     3961 ctctctctct ctctctctct ctctctcaac ttacttactt ggtatcttga tgttaggaaa
     4021 ttgaacaata aaataaaata aggtaaaatg aaagaaagac agaaagtcat atcctgtgct
     4081 tggaacagga accaggacac tatctgtggg gtccacctaa attgacaaat ttgtgattat
     4141 tacaactgtg tgctcaaata gcacttcaaa ataaggttta caggggatgg aaaagagatg
     4201 tttatggctc atgattgtgt tttattaaaa gcacatattt tagaaattca aagagcaatg
     4261 atggaataca tgtgctacgt gtagtcatga aagagggcaa gggaagatat ggtggctaga
     4321 caaaatgtct aggaaggcat acgttctcca tgtggaaatt catgtacctg gcttttgatc
     4381 catctctgct ataatttttt aacctttcct cttctcctca ttctgatgcc aatagcctga
     4441 agggctttga attaagcaac atcttgaaat cattaaccaa taaattgtgt actaatctta
     4501 gtccttcagg ataaatctca aatagtcatc agtgaggatt tatcaacaaa taagttagaa
     4561 ttatttcgtt tctcagaaca gttaagggat agacagatag atttttataa aaaaagaata
     4621 ttgtcaattt taattttctc taagctgatc tttaattata tctaaactgt gttttgtccc
     4681 atagtttatt gatgggagta tttgaaagtg ttttgaagtt catctaacat tcttattaaa
     4741 taatatgaca ttttcagcta tggaaggtta catgtggaga taatagatgt gcagtatgtg
     4801 gagacagata gaactgtgtc tttagctcct tcatgaaaat aactgtttcc ctgcaggttt
     4861 aaaatgtggt ggctactgag aacaatgtgc cttatccatg tatttggaaa aatattttgt
     4921 ttacttgagc caaacaagaa tcctgaatct cacatgaatg ttagtgagat tattaaatac
     4981 tggaactatc caagtttaga atatgaggtc gtgactgatg atggttacat tcttccaatt
     5041 aaccgaattc ctcatgggaa gaataatgct aatagttcag cccccaagat ggtagtgttc
     5101 tgtcagcatg gcttgttttc aactcctggt gtgtgggttg ccaatcctcc cgacaacagc
     5161 ctggctttca tcctagcaga agctgggtat gatgtctggc tgggaaacag cagaggaagt
     5221 acctgggcaa agaaacatgt gaccctaagc ccagattctg aagaattctg ggcttttagt
     5281 tttgatcaaa tgatagcata tgaccttccg gccaccatta atttcattct gaacacaaca
     5341 ggacaagagc agatttacta tattggccat tctctgggaa ctcttattgc tctgggggca
     5401 ttttcaacaa atcaagaact ggctgagaag atcaaactca acattttaat agctccagtt
     5461 cgtactgtta aatatgtaaa aggttttgga cgccttctag cttatttctc tccagaggct
     5521 ttcaagcttg tttttggcaa aaaagaattt ttacctaccg tagttttcag tgagtattct
     5581 aaatatgtat gcaacattaa gttggttgat gctggatgtg ctggtgtact gggatcactg
     5641 actggatttt ctgaagatca gttaaatacg agccgtattg atgtgtacat aacacacagt
     5701 ctagcaggaa catcaactca aattcttata catgctggac aggccattag aagtggtgag
     5761 tttcaggctt acgactgggg aagtccatct ctgaacatgc aacactacaa tcagaccact
     5821 cctccgttat acagcgtgga aaacatgaag gttccaactg tcatgtttac tggtttaaaa
     5881 gattttttgg ctgacccaaa agatgttgca aatttggtac ccaaaatctt caacctcata
     5941 taccataaaa ctattcctga gttcagccac cttgatttta tagtgggatt aaatgctaaa
     6001 actgaggttt ctgatgaaat tttaacaatt cttggggaat atgacagttc tgtttagctt
     6061 tagctttttg cgtgttttta aacctttctg aaagtctctt gcttataaaa gtggaatatt
     6121 ttctagctta gcatttttct ccttaattat ctttgtttct ttaagctatt gttagatttg
     6181 ttggatcatt tgcattagtg aaatttatgg ccatcaagag aatacttcgt cttgtggctg
     6241 tcttcaatta atgtaagttt atgtatgttt ccacatgatt gttcctgaag aaaagaccca
     6301 cttttaactt gtagtaatga aatcctaata tactgataaa ggaagagggc caagctcata
     6361 gtgtgatatc acatataatg ctacctgaag aacagattat aacaggtttc atacattaga
     6421 actaagggca attaatcttg ttgcttcaac tagtcaatct cacaagtctt agtcactagt
     6481 cttattgcac accaccccct gcccccaggt cacactacct gtgtggacca ggcactgttt
     6541 gaataagtca cttatgtcag tattcgctgg tatgagtgaa agaggaaata tttaaagt
//
