LOCUS       NM_001109609            1913 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus leucine rich repeat and Ig domain containing 3
            (Lingo3), mRNA.
ACCESSION   NM_001109609 XM_001075512
VERSION     NM_001109609.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474029.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001075512.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB577790.1, FQ087862.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..1913
                     /gene="Lingo3"
                     /note="leucine rich repeat and Ig domain containing 3"
                     /db_xref="GeneID:690755"
                     /db_xref="RGD:1592209"
     exon            1..97
                     /gene="Lingo3"
                     /inference="alignment:Splign:2.1.0"
     exon            98..1913
                     /gene="Lingo3"
                     /inference="alignment:Splign:2.1.0"
     CDS             144..1913
                     /gene="Lingo3"
                     /note="leucine-rich repeat and immunoglobulin-like
                     domain-containing nogo receptor-interacting protein 3"
                     /codon_start=1
                     /product="leucine-rich repeat and immunoglobulin-like
                     domain-containing nogo receptor-interacting protein 3
                     precursor"
                     /protein_id="NP_001103079.1"
                     /db_xref="GeneID:690755"
                     /db_xref="RGD:1592209"
                     /translation="MTCWLHMLGLHLLLLPTAPLATGCPARCECSASTRTVACGRRRL
                     TAVPEGIPAETRMLELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPR
                     LRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDND
                     LVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQ
                     KLPGLLHLEIDNWPLLEEVAPGSLRGLNLTSLSITHTNITAVPAAALRQQAHLTCLNL
                     SHNPISMVPRGSFRDLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEE
                     NTFHSVNTLETLRVDGNPLACDCRLLWIVQRRKTLNFDGRLPACATPAEVRGDALHNL
                     PDSVLFEYFVCRKPKIRERRLQHVTATEGDDVRFLCRAEGEPAPTVAWVTPQHHSVTA
                     ASRGRARVLPGGTLAITDTRPQDSGTYTCVASNAGGNDTYFATLTIHPAANRTQSDGH
                     NETQVGVRFPLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFSVEYSF
                     RKVDGPAAAAGQGGARKFNMKMI"
ORIGIN      
        1 cagagcccgg gaggtggcgg tggcggtggc ggcggctggt ggcggctggt ggctgctccg
       61 agcggccccc cgcgccgtcc aaggaggagc cgcccagctg tcctggacta tgctggcgag
      121 gccctaggcc cagaccttac accatgacct gctggctgca catgctgggc ctgcacttgc
      181 tgctgctgcc cacagcgccc ctggccacag gctgccccgc acgctgcgag tgctccgcgt
      241 ccactcgtac tgtggcctgc gggcgccgcc ggctgaccgc cgtacccgaa ggcatcccgg
      301 cagagacacg gatgctggag ctgagccgca accgcatccg ctgcctgaac cccggggacc
      361 tggcctcgct gcccaccctg gaggagctgg acctcaacca taacgtgatc gcccacgtgg
      421 aacctggggc cttcgccaac ctgccccgcc tgcgcgtcct gcgtctccgt ggcaaccagc
      481 tgaagctcat cccgccaggc gtgttcacac atctggacag cctcacgctg ctggacctga
      541 gcgagaacaa actggtcatc ctgctggatt tcagcttcca ggacctgcgc agcctgcagc
      601 ggctggaggt gggcgataac gacctggtgt tcatctcccg cagggccttc gcggggctgc
      661 tggggctggc tgagctcacg ctggagcgct gcaatctcac gtcgctgtcc ccggagtcgc
      721 tgggtcacct gcggggcttg ggcgctctgc gcctgcgcca cctggccatt gccgccctgg
      781 aggaccagaa tttccagaag cttccgggac tcttacatct ggagattgac aactggccgc
      841 tgctggagga ggtagccccg ggcagcctgc gtgggctgaa cctcacctcg ctgtccatca
      901 cgcacaccaa catcacggct gtgccggccg ccgcgctgcg acagcaggcc cacctcacgt
      961 gcctcaacct gtcgcacaac cccatcagca tggtgccacg cggctccttc agagacctgg
     1021 tgcgcctgcg cgagcttcac ctagcaggag ccctgctggc cgtcatcgag ccgcaggcct
     1081 tcgtggggct gcgacagatc cgcctgctca acctctcaga caacctgctg tccacgctgg
     1141 aggagaacac gttccactcc gtgaacacgc tcgagacgct gcgcgtggac ggcaaccctc
     1201 tggcctgcga ctgtcgcctg ctgtggatcg tgcagaggag gaagaccctg aactttgacg
     1261 gcaggctccc cgcctgcgcc acccccgccg aggtgcgcgg cgacgccttg cacaacctcc
     1321 ctgactccgt gctcttcgag tacttcgtgt gtcgcaagcc caagatccgg gagagacggc
     1381 tgcagcatgt gaccgccacc gagggtgacg acgtgcgctt tctgtgccgc gctgagggcg
     1441 agcctgcgcc cacggtggcc tgggtgacgc cccagcacca ctccgttacg gctgccagcc
     1501 ggggccgggc acgagtgctg cctgggggca ccctggccat cacagacacg cggcctcagg
     1561 acagtggcac ctacacgtgt gtggccagca acgccggggg taacgacact tatttcgcca
     1621 ccttgaccat ccatccggct gccaaccgga cccagagcga tgggcacaac gagacgcagg
     1681 tgggcgttcg gttccctctg gacctcacca ccattcttgt gtccaccgcc atggggtgca
     1741 tcaccttcct gggcgtggtc ctcttctgct ttctgctgct ctttgtgtgg agccgcggcc
     1801 gtggacagca caagaataac ttctctgtgg aatattcctt ccgcaaggtg gacggtccag
     1861 cggctgcggc tggccagggt ggcgcacgca agttcaacat gaagatgatc tga
//
