LOCUS       XM_039110617             880 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus lin-28 homolog A (Lin28a), transcript
            variant X2, mRNA.
ACCESSION   XM_039110617
VERSION     XM_039110617.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..880
                     /gene="Lin28a"
                     /gene_synonym="Lin28; RGD1566408"
                     /note="lin-28 homolog A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 86% coverage of the annotated genomic feature by
                     RNAseq alignments, including 19 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:500562"
                     /db_xref="RGD:1566408"
     CDS             152..595
                     /gene="Lin28a"
                     /gene_synonym="Lin28; RGD1566408"
                     /codon_start=1
                     /product="protein lin-28 homolog A isoform X2"
                     /protein_id="XP_038966545.1"
                     /db_xref="GeneID:500562"
                     /db_xref="RGD:1566408"
                     /translation="MEGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSERRP
                     KGKSMQKRRSKGDRYGQEGSATRLPLRSHCQRCYNCGGLDHHAKECKLPPQPKKCHFC
                     QSISHMVASCPLKAQQGPSSQGKPVYFREEEEEIHSPTLLPEAQN"
ORIGIN      
        1 ggctgcacac ctaacttcaa caggttggaa aaggaaaatg ggattcctgc ccctcctccc
       61 gttgaaatat ttatctgctg cgggaaggac ttggctgaag gcgccatagg ggaggcctcc
      121 tctctagtcc atcctggaga gcaagctgca catggaaggt ttccgaagcc tcaaggaggg
      181 tgaggcagtg gagttcacct ttaagaagtc tgccaagggt ctagagtcca tccgcgtcac
      241 tggccctggt ggcgtgttct gtattgggag tgagcgacgg ccaaagggga agagcatgca
      301 gaaacgaaga tccaaaggag acaggtacgg ccaggagggg agcgccactc gactgccact
      361 gagatcccat tgccaaaggt gctacaactg tggtgggcta gaccaccatg ccaaggaatg
      421 caagctgcca ccccagccca agaagtgcca cttttgccaa agcatcagcc atatggtggc
      481 ctcatgtcca ctgaaggccc agcagggccc cagttctcag ggaaaacctg tctacttccg
      541 ggaggaggaa gaagagatcc acagccctac cctgctccca gaagcccaga attgaggccc
      601 aggagtaggg gttattcttt ggctaatggg gagtttcagg gaggaggcat caatccgcag
      661 agtggagaaa gtgggaatcg ggtgggttgc gtgggtagct tgcactgtca tatgacatct
      721 caggccgggg ttcccagtgt caccctgtct ttccttggag ggaaggaaag ggtgaggcaa
      781 aggaactcct accacgctcc atctagaagc aagtgaaagc ttttgtgggg aaccacccta
      841 gaatctgcat gctttatctg aggctctaat gggctctgct
//
