LOCUS       NM_001100123            1034 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus leukocyte immunoglobulin-like receptor, subfamily
            C, member 2 (Lilrc2), mRNA.
ACCESSION   NM_001100123 XM_001076099
VERSION     NM_001100123.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Hoelsbrekken,S.E., Fossum,S. and Dissen,E.
  TITLE     Molecular cloning of LILRC1 and LILRC2 in the mouse and the rat,
            two novel immunoglobulin-like receptors encoded by the leukocyte
            receptor gene complex
  JOURNAL   Immunogenetics 57 (7), 479-486 (2005)
   PUBMED   16041585
  REMARK    GeneRIF: LILRC1 and LILRC2 both have two extracellular Ig-like
            domains and a cytoplasmic tail devoid of any known signaling
            motifs. The transmembrane regions contain an arginine residue.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jul 26, 2007 this sequence version replaced XM_001076099.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY998483.1, SRR26360186.1108491.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760434,
                                           SAMEA5760476 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                JAXUCZ010000001.1  74192497-74192584   c
            89-124              JAXUCZ010000001.1  74192300-74192335   c
            125-409             JAXUCZ010000001.1  74191828-74192112   c
            410-712             JAXUCZ010000001.1  74191401-74191703   c
            713-1034            JAXUCZ010000001.1  74188164-74188485   c
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..1034
                     /gene="Lilrc2"
                     /note="leukocyte immunoglobulin-like receptor, subfamily
                     C, member 2"
                     /db_xref="GeneID:690906"
                     /db_xref="RGD:1589872"
     CDS             1..849
                     /gene="Lilrc2"
                     /codon_start=1
                     /product="leukocyte immunoglobulin-like receptor,
                     subfamily C, member 2"
                     /protein_id="NP_001093593.1"
                     /db_xref="GeneID:690906"
                     /db_xref="RGD:1589872"
                     /translation="MVTVVSFICAAGTPGEDIMITAFTVLFYLGLILDPRTTVVAGTL
                     PIPTLWAEPGSVVTKGQSVTLWCTGTQDAQEYSLYKKENSKAWKSQTLLEPGNKANFS
                     ISFMTEYHAGLYYCYYYSPAGLSEYSNILEMVVTGFYSKPSISAIPSSLVTSGGNVTL
                     KCSSHQGYGRYTLTKEGEENVSWTQDPQKQPNGHFMALFPVGPVTYKHRWSFRCYGYY
                     KRTSQVWSVPSDTLQLLFSDSYPQDHTVENLIRMAVAVLVLVVLGILLFEAQNSQRRP
                     QGAVRR"
     exon            1..88
                     /gene="Lilrc2"
                     /inference="alignment:Splign:2.1.0"
     exon            89..124
                     /gene="Lilrc2"
                     /inference="alignment:Splign:2.1.0"
     exon            125..409
                     /gene="Lilrc2"
                     /inference="alignment:Splign:2.1.0"
     exon            410..712
                     /gene="Lilrc2"
                     /inference="alignment:Splign:2.1.0"
     exon            713..1034
                     /gene="Lilrc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtcactg tagtgtcatt tatctgcgca gctgggaccc ctggagaaga cataatgatc
       61 actgcattca cagtgctgtt ctaccttgga ctgattctag atcccaggac cacagttgtg
      121 gcaggaacac ttcccatacc caccctttgg gctgagccag gctctgtggt caccaaggga
      181 cagtctgtta ctctctggtg cactggtacc caggatgccc aagagtacag tctgtataaa
      241 aaggaaaatt caaaagcctg gaagtcacaa accttacttg aacctgggaa caaggcgaac
      301 ttctccattt cattcatgac agagtaccat gcaggattat attactgcta ctattacagt
      361 cctgctggct tgtcagaata cagtaacatc ttagagatgg tagtgacagg attctacagc
      421 aaacccagca tctcagccat accaagctcc ctggtcacct caggaggaaa tgtgactctc
      481 aagtgtagtt cacaccaggg atatggaagg tataccttga ctaaggaagg agaagaaaat
      541 gtgtcctgga ctcaggaccc acagaaacaa cccaatggac attttatggc tctgtttcct
      601 gtgggcccag tgacttacaa acacagatgg tccttcaggt gctatggcta ctataaaaga
      661 acctctcagg tatggtcagt tcccagtgat accctacagc tccttttttc agattcatac
      721 ccacaagatc acacagtgga gaatctcatc aggatggctg tggctgtctt ggttctggtg
      781 gttcttggga ttctgctctt tgaggctcaa aatagccaga gaagaccgca aggtgcagtg
      841 aggaggtgaa ccaaagagga atgtatcatt tattgtggta gaggtcttgg agatgaatca
      901 aatgagtaga gaaaatcatg gaagaaaatt tatggcacaa gtgtatgaac attattgaga
      961 accctgaaga caatgccttt acccaaatgg tacaggataa atgtctgcga tatctgtgaa
     1021 gagaactcca cact
//
