LOCUS       XM_039100647            4464 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus leukocyte immunoglobulin like receptor
            B3 (Lilrb3), transcript variant X1, mRNA.
ACCESSION   XM_039100647
VERSION     XM_039100647.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100647.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4464
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4464
                     /gene="Lilrb3"
                     /note="leukocyte immunoglobulin like receptor B3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 16 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments, including 45 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:308350"
                     /db_xref="RGD:1566307"
     CDS             811..3909
                     /gene="Lilrb3"
                     /codon_start=1
                     /product="leukocyte immunoglobulin-like receptor subfamily
                     B member 3 isoform X1"
                     /protein_id="XP_038956575.1"
                     /db_xref="GeneID:308350"
                     /db_xref="RGD:1566307"
                     /translation="MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQ
                     VTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRS
                     LTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKED
                     EKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLV
                     SGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNK
                     AEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGV
                     TVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCY
                     GYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYF
                     LYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVM
                     TGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTE
                     MSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGP
                     VLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIA
                     GQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSI
                     PMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLL
                     SHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKID
                     LQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSA
                     DNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVID
                     QQVCFDFSRSPGFQWPTQTFYFFLLQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGR
                     IC"
ORIGIN      
        1 ttttggtcta catagtgaga atcaggccat cctgagctat atagtgagac tctgtctcaa
       61 aaaatcagaa agccttgaaa atttgatcac acacttctaa tgaatcttaa cacattggtt
      121 catcagatga atttgtatcc agtcttgaca gaaatgaagt tttctgacac tgctgtctcg
      181 tcttgtgtga atatgcattg tttatgtatc cacaggaata tttcatataa tatccccaaa
      241 gtatctcaaa ggctgagtag tcaactgacc gttagtttgg tatggctgaa agaatgaatg
      301 ataaccaaga agatgctctg agagaaaaag atcatccgac tctgagcttt tatatgtgaa
      361 tatgcagact caggaaacaa ccagacatat tttgtgttag gtcctagtct cttttgattg
      421 ggaccatcca ggcagataca tatgggtaca atggaggtgc tgtgcatgaa gagaacacag
      481 tcagatttgg gttgtagtgc cagtatagag gtagctgagg gaataggatg agttttttta
      541 aactgtatga gattcaaggg tttctgtctc agaaaccaaa actaaagaac cacaaaaaga
      601 cagaagccac atattctgga gcccaaccta ctacagatct ggataaaaaa gagagtcaga
      661 tgccccagat cagttcctct tcctcagagc ctcataatat gacatcctca tgacacaaag
      721 aagaaaccag cctgtgtaga ccatacactt tgtgtctgta catttggcaa gaagacaagc
      781 tctgaaaacc tgcagcaact ggaagatgcc atggtttcta ctctcacagc ccttgcttat
      841 cttggattga tcctgggctc cgagaaccca gtcctgtcag gtgccttcac taaacctaca
      901 ataaagatgg tgccaagcaa tgtggtaact actgggaaac aggtgaccat cttctgtgaa
      961 gggtcctcac atgccaaaga ataccgtctc cacaaagaag gaagtcccga ttacctgaca
     1021 ccaacaacct ttctggaaac tgagaacaag gccaagttct caatctcacc aattcaatgg
     1081 aataatgcag gacaatactg gtgttcgtat agaagcctga ctaacaaatt acgacaaagt
     1141 gacatcatgg agctggtggt gacaggagtt atccttggtg aagtcacact gtctgccctt
     1201 cccagctatg ttgtgacttc agggagaaat gtgactcttc agtgtgcatc acaagtagta
     1261 tatgataggt tcattctaat gaaggaagat gagaagttct ccactgcaat gccctcatgg
     1321 aaaatatacc ctgtactatg gggagccatt ttcacattag gtcctgtgac ctcaaaccag
     1381 agatggaggt tcacatgcta tggatattac ttgagtagct ctctgatatg gtcaaagcca
     1441 agtaaccatt tagagctatt ggtctcgggg acccttcaca aacccatact ctgggctcat
     1501 ccaggttcca tggtaacatc agggagccct gtgaccatct ggtgtgaggg ggaccaagaa
     1561 acacaaacat atgtgctata tagacaggga agcctagagt cctggaacag acagacccaa
     1621 aaggactata acaataaagc agaattcacc atcccatctg tgacatattt gaatgcaggg
     1681 cattatttct gttactctta cacctctgct gggtggtcag aacacagtga caccctggag
     1741 ctggtggtta caggagtcta caaaaaaccc atctttttgg ccctgaaaaa ccctattgta
     1801 aacttaggag tgactgtgac catctcatgt acctcaaatc agagttttaa ctgtttcctt
     1861 ttaatggatg atgatcagaa aatctaccga ttctttgact tacaatactc atattctgga
     1921 gaatctctag cccgatttca agtgggtcca ataacctcta gacaaaggtg gagattcaga
     1981 tgctatggct attatacaga taatcctcag gtgtggtcag aagccagcga tccattggat
     2041 ttcctggtct cagggaacct ccagaaaccc accttgtggg ctgagccagg ttcagtgatt
     2101 gaatcaggaa attctgtgac catttggtgt gaagggacca tggaaactca aatatatttc
     2161 ctgtataaag aaggaagccc atcatcctgg ctcagacaaa ctccaaagga gcctggtaac
     2221 aaggccatgt tcttcattgc attcatggaa aagcataatg cagggcaata tcgctgttac
     2281 tgttacaatt ttggtgggtg gtcacagcac agtgacacac tggagctggt gatgacaggt
     2341 gttcaccatg gcaaacctac tctttcagcc tttcccagtc ctatggtgac ctcaggtgga
     2401 aatgtgaccc tctattgtgc ctcatcaaca atatatgatt ggtacattgt gactgggcaa
     2461 gatttgaagt tctccagatt ccagagggca cagttcatac ccaccgagat gtcccaggct
     2521 ctgttctctg agatctctgt ggcatctaga aagaaagggc catttagatg ttatggattc
     2581 aatgaaagta ctccacatct gtggtcagag gccagtaatc ctctggagat acatgtttca
     2641 ggggtttcaa ggaagccctc tctgctgaac caacaaggcc ctgttctggc ccctggagag
     2701 aacctgacac tccggtgttc ctctgagctc agttatgaca gattttctct atccaaagag
     2761 ggtagaagtg acctcccaca gctctctgtc agccagtcac agactggaga gtattatgcc
     2821 aacttctttt tatattctgt ggatttctct attgctggcc aatatagatg ctatggtgca
     2881 tccagatttt cttctgagtg gtcagccccc agtgttcctc aagacattct ggtcacagga
     2941 catcctccta ttacaccaag cctctcagtg aatccaggca ccattgtgtc ctcaggagag
     3001 aatgtgaccc ttctctgtca atcatcaata ccaatggaca ctttctttct gttcaagaaa
     3061 ggtgatgcct atccctacat gcaccaaaga ttaaagttcc aaggtccaca atgtaaggca
     3121 gaattctccc tgagtgctgt gaccccaaac attgggggta tctttacgtg ctttggttct
     3181 caaagctcat ctccttacct gttgtcacac cccagtgttc ctgtggagat caaagtttca
     3241 ggactggcaa agtaccagaa gtctttgata tgggtctccg tagtcttctt cctactgttc
     3301 tttgtcctca ccctcttctt tttcctcaga ctctggcatc agaacaagca caggaaagga
     3361 gtacagacaa agattgactt gcaacatcca gaaggagctg tagagccaaa gagcattgtt
     3421 ggacacctgc agaagagttc cagaccagct cctgccatcc aggaagaaat cttgtgtgag
     3481 aaaagatggc ctgggaggga gataactgag gtctcagcat ctgatgctac tgtgaaggtc
     3541 acaaggtctg cagacaatgt ggagctaggc atactgagcc aacatcagga tgacccctcc
     3601 atacacttgt atgcccaggt gaaacctgct agactcagaa gggcacagac tacctcttct
     3661 tccctgtttc caaaggaatt acagcactct aaacacagac agaaaaacag agaccaagtc
     3721 atagatcagc aggtgtgttt tgacttctcc agatccccag gtttccagtg gccaacacaa
     3781 accttctact tttttctact tcaggctgat acatctcagg attctcatgc tgtgatttat
     3841 gcccagctgc acatcatgac accaagacag ggcaggcaaa cttccctctt tccgggaaga
     3901 atatgctgaa ttgagaccct tctctgttgt caaccagtcc agagagatct agaatctaca
     3961 ttccgtggga gaggaaggac tcagccatgt cagaaaatga gatctgtcac aggcacactg
     4021 tcattgtgca aaaatatctg gtgtctagtg tattctgaga tcttcaggga ctcacctgat
     4081 tatgtagtct gagataagaa atatgcctgc atgttttaaa tagggcaaat gttttgttag
     4141 taaccaatgc ataaaatgaa gaaagaaaat aggactgaag gaagtttttg ttctgtggtt
     4201 tttcttttgt tttgatatat tttcagattg ttgtgtaatt acattctctc ttccttccct
     4261 ctctctaaat atgctcaaag actcttcact ctcttacaca tttatggttt cttttttcat
     4321 caatttttct cacatctaca tatacaatat gtatatgtac atacatatac atatgtatat
     4381 acaaaattgc aaaacctttt aatctcaata tatacctttt gtcaattgta tcttaataaa
     4441 gctgaaaatt gaatgatgaa ataa
//
