LOCUS       XM_039100361            2484 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus leukocyte immunoglobulin like receptor
            B1 (Lilrb1), transcript variant X2, mRNA.
ACCESSION   XM_039100361
VERSION     XM_039100361.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2484
                     /gene="Lilrb1"
                     /note="leukocyte immunoglobulin like receptor B1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 15 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100912456"
                     /db_xref="RGD:6487069"
     CDS             172..2214
                     /gene="Lilrb1"
                     /codon_start=1
                     /product="leukocyte immunoglobulin-like receptor subfamily
                     B member 3-like isoform X2"
                     /protein_id="XP_038956289.1"
                     /db_xref="GeneID:100912456"
                     /db_xref="RGD:6487069"
                     /translation="MTNHGDCPASRATPCFQSLQKSSVALLSSRVAASERRCHDLHLH
                     SPALSWTDSGPLDPSADRNGNLQRRVPKNNQKPTNKTEFLFLNVGHQNAGQYHCSYKS
                     QGKSSDYSEPLELVVTGAYSKPSLSVQSNPVVTSGGYVTLKCEPSHYDHTLILTVEGS
                     QKPSWRQETQCNHYTGKCHALFPVGPLTSNQRWIFRCYSYETNTPQVWSAPSEPVELL
                     VSGKLQKPTIKAEPGSVMHSGRAMTIWCQGDLDAEIYFLYKEGSHNTQSTQTLQQPGN
                     KAKFFIPSVTQSHAGQYGCYCYSSAGWSEPSDTLELVVTGMYNYYPLMLSGLPSPVVP
                     EGGNVTLHCTSLRNYDKFILTKEDQKFTNSLDTEYIPSTGQHQALFVLGPMTPNYSGT
                     FRCYGYYKNTPQLWSVPSELLKILISGPLRKPSLLSHQGRILNPGMSLTLQCYSDINY
                     DKFALYKEGGADIIQSSSQWTKAGLSKANFTLGYVNHSTGGQYRCYGAHNLSSELSAS
                     SDPLDILITGQIYDTPSLSVMPNSTVHSGENVTLMCWSKYSVDTFILSKEGSGQPPLR
                     RKSKFQDQQYQSEFSMRAVTSKLSGTYRCYGSPDSSLYLLSFASAPVELIVSESIEAS
                     SWPAKRFITTATPENQDHTMENLIRMGMAVLVLIVLSILAAVAWQSHRQTHHAAGK"
ORIGIN      
        1 atggtctgac agtgctgtgc acaggtgaag cagacactgg tgggctgagg aaatgtcgtc
       61 tgtgtaaggc ctgatcgcag agttctactg cctggcctag tcacagcatt gaggaagtta
      121 gagcagggtg cctgaggagg gctgttcccc tttctgtagg gctgctgaaa aatgaccaat
      181 catggggact gccctgcttc cagggccaca ccctgtttcc aatcccttca gaaaagctct
      241 gtagctctgc tctcaagcag agttgcagcc tctgagagga gatgccatga ccttcacctt
      301 cacagccctg ctctgtcttg gactgactct gggcctctgg atcccagtgc tgacagaaat
      361 ggaaacctac agagaagagt tccaaagaac aatcagaagc caacaaacaa gactgaattc
      421 ttatttttaa atgtaggcca tcaaaatgca gggcaatatc actgttccta caagtctcag
      481 ggtaaatcat cagactacag tgagcccctg gagctagtgg tcacaggagc ctactcgaaa
      541 cccagccttt cagtccagtc caatcctgtg gtgacctcag gagggtatgt caccctcaaa
      601 tgtgagccct cacattatga tcacacattg attcttactg tagaaggatc tcagaaaccc
      661 tcctggaggc aggaaacaca gtgtaaccac tacactggga agtgtcatgc cctgttccct
      721 gtgggccctt tgacctccaa ccagaggtgg atattcagat gctacagcta tgaaactaac
      781 acaccacaag tgtggtcagc tcctagtgaa ccagtggagc tcctggtgtc agggaaactg
      841 caaaaaccaa ccatcaaggc tgaaccaggc tctgtgatgc actctggaag ggccatgacc
      901 atctggtgtc agggggacct ggatgcagaa atatattttc tgtataagga gggaagccac
      961 aatacacaga gcacacagac cctacaacag cctgggaaca aggccaagtt cttcatccct
     1021 tctgtgacac aaagccatgc agggcaatat ggctgttact gttacagctc agctggttgg
     1081 tcagagccca gtgacaccct ggagctggtg gtgacaggaa tgtacaacta ctatccactc
     1141 atgctgtcag gactgcccag ccctgtggtg ccagagggag ggaacgtgac actccactgt
     1201 acctcactcc gaaactatga taaattcatt ctcaccaagg aagatcagaa gttcaccaac
     1261 tcactagaca cagagtatat accttctact ggacaacacc aagccctgtt tgtattggga
     1321 cccatgaccc caaactactc agggacattc agatgttatg gttactacaa gaatacccca
     1381 cagttgtggt cagtacccag tgagctccta aaaatactca tctcaggacc attgaggaag
     1441 ccatctctgc taagtcatca aggacgtata ctaaatcctg gaatgagcct cacactgcag
     1501 tgttactctg acatcaatta tgacaaattt gcactgtaca aagaaggggg agctgacatc
     1561 atacagtcct ctagccagtg gaccaaggct ggcctctcca aagccaactt cacactggga
     1621 tatgtaaacc actccactgg aggccaatac agatgctatg gtgcacacaa cctctcctct
     1681 gagttgtcgg cctccagtga ccccctggac atcctgatca caggacagat ttatgacaca
     1741 ccttccctct cagtgatgcc caactccaca gtacactcag gagagaatgt gaccctgatg
     1801 tgttggtcaa agtactctgt ggacactttc attctgtcaa aggagggatc aggccagcca
     1861 ccccttcgac gaaagtcaaa gttccaagat caacagtacc agtcagaatt ctccatgaga
     1921 gctgtgacat ccaagctctc gggcacctac aggtgctatg gttctcccga ctcatctctc
     1981 tacctgttgt catttgccag tgcccctgtg gagctcatag tctcagaatc catcgaagcc
     2041 tccagctggc cagctaaaag gttcatcaca acagccactc cagaaaacca ggatcacaca
     2101 atggagaatc tcatcaggat ggggatggct gtcctggtcc tcatagtcct ttcgattcta
     2161 gctgctgtgg cctggcaaag tcatagacag acccaccacg cagctggcaa ataatctaaa
     2221 gagaaaggac agctttcaat gttctacact ctgcgaaatg aatctgatga tccaaaattt
     2281 tctgtcagaa aaatgtgttg tgatagaagt ccagggagca aaactgtttg gggttctgag
     2341 gaaagaagtt ttatgatgag gtgattcctt ggtgaacaaa tatttgtccc tcacatactg
     2401 ggggtctttg cttcctgaac ccacactctt ctgaaactat gaaataataa aatattctgt
     2461 cccatctgac tggaatttct ttca
//
