LOCUS       NM_001401282            3068 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus LHFPL tetraspan subfamily member 3 (Lhfpl3),
            mRNA.
ACCESSION   NM_001401282 XM_017593098
VERSION     NM_001401282.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Nov 29, 2022 this sequence version replaced XM_017593098.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.15192.1,
                                           SRR26643298.21333.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840109, SAMN12840110
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-574               JAXUCZ010000004.1  13270801-13271374   c
            575-811             JAXUCZ010000004.1  12900678-12900914   c
            812-3068            JAXUCZ010000004.1  12728537-12730793   c
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q11"
     gene            1..3068
                     /gene="Lhfpl3"
                     /gene_synonym="RGD1559727"
                     /note="LHFPL tetraspan subfamily member 3"
                     /db_xref="GeneID:103692025"
                     /db_xref="RGD:1559727"
     exon            1..574
                     /gene="Lhfpl3"
                     /gene_synonym="RGD1559727"
                     /inference="alignment:Splign:2.1.0"
     CDS             139..840
                     /gene="Lhfpl3"
                     /gene_synonym="RGD1559727"
                     /note="lipoma HMGIC fusion partner-like 3"
                     /codon_start=1
                     /product="LHFPL tetraspan subfamily member 3 protein"
                     /protein_id="NP_001388211.1"
                     /db_xref="GeneID:103692025"
                     /db_xref="RGD:1559727"
                     /translation="MPGAAAAAAAAMLPAQEAAKLYHTNYVRNSRAIGVLWAIFTICF
                     AIVNVVCFIQPYWIGDGVDTPQAGYFGLFHYCIGNGFSRELTCRGSFTDFSTLPSGAF
                     KAASFFIGLSMMLIIACIVCFTLFFFCNTATVYKICAWMQLTSAACLVLGCMIFPDGW
                     DSDEVKRMCGEKTDKYTLGACSVRWAYILAIIGILDALILSFLAFVLGNRQDSLMAEE
                     LKAENKVLLSQYSLE"
     exon            575..811
                     /gene="Lhfpl3"
                     /gene_synonym="RGD1559727"
                     /inference="alignment:Splign:2.1.0"
     exon            812..3068
                     /gene="Lhfpl3"
                     /gene_synonym="RGD1559727"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agactctaga actggtgctt ctgggctgag gcggaggcag gggaattgct acgcgcgcgg
       61 ctcggcgagt gtgtctcctg cgcgccgaga ggcgggggga ggcggaggac cgggaggcgg
      121 aggaggagga gggggagaat gcccggagcc gccgccgccg ccgccgccgc gatgctcccg
      181 gctcaggagg ctgccaagct gtaccacacc aactatgtgc ggaactcgcg ggccatcggc
      241 gtgctgtggg ccatcttcac catctgcttt gccatcgtca acgtggtgtg cttcatccag
      301 ccctactgga tcggcgacgg cgtggacacc ccgcaagccg gctatttcgg gctcttccac
      361 tactgcatcg gtaacggctt ctcccgggag ctgacctgca ggggtagctt cacggacttc
      421 tccacgctgc cctcgggcgc cttcaaagct gcctccttct tcatcggtct ctccatgatg
      481 ctcatcatcg cctgcatcgt ttgctttacc ctcttcttct tctgcaacac agccaccgtg
      541 tacaagatct gtgcttggat gcagctcacc tccgctgcct gccttgtcct tggctgtatg
      601 attttccctg atggctggga ttcagacgaa gtaaaacgga tgtgcggaga gaagacagac
      661 aagtacactc ttggggcctg ctcggtccgc tgggcataca tcctggctat catcggaata
      721 ttggatgccc tgatcctctc atttctagca ttcgtgcttg ggaaccgaca agacagcttg
      781 atggcagagg aactaaaggc agaaaacaaa gttctgttaa gccaatattc tctagaatga
      841 gcacaaaaca agtcaaataa cagctaaaca aacagctttg tacatcagca ccaagaagga
      901 agacactggg gagagatcag agtccagaga tgaatacgca caaaatcgaa acatccactc
      961 gtcaaagcac ctctgattct agatctgcag agactcgagt ggttttctgg gaggagctac
     1021 gatcacggac taaacaccag ctcgttggga actgtcatta agtaagatca gatcacattc
     1081 atgaaaatca tattcaggaa atagtttaag aaagaagaat acagctgtgc taggattaac
     1141 ctgtaaaata catatgttct gaggtttata agctgtcctt tttaaatcaa actgaaaaca
     1201 aaacacacac aaaaagcttt aatctttcaa tgctattaaa cgaaataaaa gggcagttag
     1261 ttctagacta ttcccgtccc agtagccaag aggcccatgg agtgtcacgt cttggggaat
     1321 gcctctgacc cttcgtccct catcactact gtccactcat ttcactgtgc aattagttac
     1381 agccacgtgg ttattaggag acttagccct tcagacttct cagccactgt gtgttcagtt
     1441 taatctgtct gtacaactta tcactaagga aatgttcctg ccacaactcc atcaaactgt
     1501 gaatcacagg aagtacatcg agacaccgta ggttcccaag cagcaaggat ctccctgtca
     1561 ttgacaacac agcatcaagg agctctgaac aatatagaaa gtctattttc acttggatgc
     1621 tctctcatgt aatatatagg ctgctatcaa ataaacactt tttctaattc tccctagtat
     1681 atgcatagga atttaatata ctttataaat agatacctaa aatatgagtt ttctacttcc
     1741 tcattctaaa agtctctaga aatccacatt ctttatttcc tttactgaca tatactcatt
     1801 tttgctttgt caaaagaaac tcttccatta aatctacttc taaacgatag taagtggtac
     1861 taacagagta agtaaaaact taatagcctt agaagtaaat aactatatac ttacatgtca
     1921 aaggaacttg atagggataa gttacctttt gtttattaat gttgtttttg aaaattctca
     1981 tacttttccc cttttggtta gctggtactt ggaagtagtt gcaactaacc agttctcttc
     2041 aagaatcttt tcctcccagg atcccccagc ccttgccctc ataacacacc ctgcctaagt
     2101 ccaacaacag agaaatactt ggtattaaag tagtccattg tccgagtata aactcaagcc
     2161 aaggtgcata taatgggggc tgggtgtaag ccagcccatg ttctacacct gagcaaaaaa
     2221 aagccacaca aatagaatga ctgcagcccc aggctcaggg ttggactaaa ttagcatttc
     2281 accagagcat ccgctggaag acagcatgag gatggggctg ccctctcttc tgtccccata
     2341 agaccacgct cacgatttta gccttgtttt ctcgaatcaa gtgtttcaaa tggctgaaag
     2401 tacatcacaa atacactcaa gtgctcatgt aactaaaacc cagttcacag agagagaact
     2461 caggctttcc cagagaagta aatcaagggg acgcttagcc tctgcaagtg tagttctagt
     2521 catcctgggg gctgttgttg ctttaagtag tagtcatccc gaggcattca gaataccctc
     2581 cttactgaat ttaattacac acaacttttt aaaaattcac cttttatttc aggggaggca
     2641 tctctatatc ttcactaaaa tcagaaggta ttaggttctt ctaatccatg tgaattgtga
     2701 ttctgtctgg gtcctacatc attagcagta atgtttcaaa aaaaataaaa ggtacttcct
     2761 ctccacgtgc aaatgctttt atgtttttgc catgaaacct aggtgtaatt tagcatatga
     2821 cagcgctatg aagatgggcc attgatgata tatcatttgt acatagataa cacacatgaa
     2881 accactaaat gttaagtata agaaacatgt ttttaccttt aaaaaaaaga ctcttttttc
     2941 tcattctgtt ctattatgtc caaaagttgt gtgtaatttt tttaaggtcc aggaaatgta
     3001 aagaaatttg ttggaatatc tgaatttctg taaaaaaaaa ataaaaataa aattttgtta
     3061 cataaaaa
//
