LOCUS       NM_001107219            1783 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus leucine-rich repeat LGI family, member 2 (Lgi2),
            mRNA.
ACCESSION   NM_001107219 XM_001056168 XM_223494
VERSION     NM_001107219.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Favuzzi E, Deogracias R, Marques-Smith A, Maeso P, Jezequel J,
            Exposito-Alonso D, Balia M, Kroon T, Hinojosa AJ, F Maraver E and
            Rico B.
  TITLE     Distinct molecular programs regulate synapse specificity in
            cortical inhibitory circuits
  JOURNAL   Science 363 (6425), 413-417 (2019)
   PUBMED   30679375
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Abonnenc M, Nabeebaccus AA, Mayr U, Barallobre-Barreiro J, Dong X,
            Cuello F, Sur S, Drozdov I, Langley SR, Lu R, Stathopoulou K,
            Didangelos A, Yin X, Zimmermann WH, Shah AM, Zampetaki A and Mayr
            M.
  TITLE     Extracellular matrix secretion by cardiac fibroblasts: role of
            microRNA-29b and microRNA-30c
  JOURNAL   Circ Res 113 (10), 1138-1147 (2013)
   PUBMED   24006456
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168885.1.
            
            On Sep 14, 2008 this sequence version replaced NM_001107219.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168885.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q11"
     gene            1..1783
                     /gene="Lgi2"
                     /note="leucine-rich repeat LGI family, member 2"
                     /db_xref="GeneID:305417"
                     /db_xref="RGD:1310391"
     exon            1..215
                     /gene="Lgi2"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..1656
                     /gene="Lgi2"
                     /codon_start=1
                     /product="leucine-rich repeat LGI family member 2
                     precursor"
                     /protein_id="NP_001100689.2"
                     /db_xref="GeneID:305417"
                     /db_xref="RGD:1310391"
                     /translation="MALRRGGGALGLLLLSAACLIPPSAQVRRLARCPATCSCTKESI
                     ICVGSSWVPRIVPGDISSLSLVNGTFLEIKDRMFSHLPSLQLLLLNSNSFTVIRDDAF
                     AGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELD
                     LRGNKFECDCKAKWLYLWLKMTNSTVSDVLCIGPPEYQEKKLNDVTSFDYECTTTDFV
                     VHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMVLEWDHIEMNFRSYDNITGQSIVG
                     CKAILIDDQVFVVVAQLFGGSHIYKYDESWTKFVKFQDIEVSRISKPNDIELFEIDDE
                     TFFIIADSSKAGLSTVYKWSSKGFYSYQSLHEWFRDTDAEFVDIDGKSHLILSSRSQV
                     PIILQWNKSSKKFVPHGDIPNMEDVLAVKSFRMQNTLYLSLTRFIGDSRVMRWNSKQF
                     VEVQALPSRGAMTLQPFSFKENHYLALGSDYTFSQIYQWDKEKQQFKKFKEIYVQAPR
                     SFTAVSTDRRDFFFASSFKGKTKIFEHIIVDLSL"
     exon            216..287
                     /gene="Lgi2"
                     /inference="alignment:Splign:2.1.0"
     exon            288..359
                     /gene="Lgi2"
                     /inference="alignment:Splign:2.1.0"
     exon            360..431
                     /gene="Lgi2"
                     /inference="alignment:Splign:2.1.0"
     exon            432..503
                     /gene="Lgi2"
                     /inference="alignment:Splign:2.1.0"
     exon            504..673
                     /gene="Lgi2"
                     /inference="alignment:Splign:2.1.0"
     exon            674..838
                     /gene="Lgi2"
                     /inference="alignment:Splign:2.1.0"
     exon            839..1760
                     /gene="Lgi2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtccgggcgg ggaccggggg acccggcatg gcgctacgga gaggcggcgg ggcgctgggg
       61 ctgctgctgc tgagcgccgc gtgcctcatc ccgccgagcg cgcaggtgag gcggttggcg
      121 cgctgccccg ccacttgcag ctgtaccaag gagtccatca tctgcgtggg ctcctcttgg
      181 gtgcctagga tcgtgcctgg cgacatcagc tccctgagcc tagtaaatgg aacatttctg
      241 gaaatcaagg accgaatgtt ttcccatctg ccttccctac agctgctatt gctgaattct
      301 aactccttca cggtgatccg ggatgatgcc tttgctggcc tttttcatct tgaatacctg
      361 ttcattgaag ggaacaaaat agaaaccatt tcaagaaatg cctttcgggg cctccgtgac
      421 ctgactcacc tttctttggc caacaaccac attaaagcac ttccaaggga cgtgttcagc
      481 gatctggatt ccctgattga actagactta aggggtaata aatttgaatg tgactgcaaa
      541 gccaaatggc tgtatctgtg gctgaagatg acaaattcca cggtgtctga tgtgctgtgt
      601 atcggtccac cagaatacca ggagaagaaa ctcaacgacg tgaccagctt tgactatgag
      661 tgcaccacca cagattttgt cgttcatcag actctgccat accagtcggt gtcagtagac
      721 acgttcaact ccaagaatga cgtgtacgtg gccatcgcac agcctagcat ggagaactgt
      781 atggtgttgg agtgggacca catagaaatg aatttccgga gttatgacaa tatcacaggt
      841 cagtccatcg tgggctgcaa ggccatcctc attgatgacc aggtcttcgt ggtggtagcc
      901 caactctttg gtggctccca catttacaaa tacgacgaga gctggacaaa gtttgtcaag
      961 ttccaagaca tagaggtatc tcgaatttcc aagcccaatg acatcgagct gtttgagatc
     1021 gacgatgaga cgttcttcat catcgctgac agctcgaaag cggggctgtc cacagtatac
     1081 aaatggagca gcaaagggtt ttactcctac cagtcactac atgagtggtt cagggacacg
     1141 gatgcagagt ttgttgacat tgatgggaag tcacacctca tcctgtctag ccgctcccag
     1201 gttcccatca tcttgcagtg gaataaaagt tccaagaagt ttgtccctca tggcgacatc
     1261 cccaacatgg aggatgtgct ggctgtgaag agcttccgaa tgcagaacac cctgtacctt
     1321 tccctcacgc ggttcatcgg ggactctcgg gtcatgcggt ggaacagtaa gcagttcgtg
     1381 gaggtccagg ctcttccgtc ccggggggcc atgaccttgc aacccttctc cttcaaagag
     1441 aaccactacc tggccctggg gagtgactac acgttctcac agatatacca gtgggataaa
     1501 gagaaacagc agtttaaaaa gtttaaagaa atctatgtgc aggcgccccg ctccttcaca
     1561 gctgtctcca ccgacaggag agatttcttt tttgcgtcca gtttcaaagg gaagacaaag
     1621 atttttgaac atatcattgt tgatttaagt ttgtgaaggt gtaatcggag ggatttcaaa
     1681 gacgcatagt gttagctctc acaagagagg caggaccaag aagaaataaa aataataata
     1741 ataaaaaaat cataaaataa aaaaaaaaaa aaaaaaaaaa aaa
//
