LOCUS       NM_001134730            3534 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus galectin-like (Lgalsl), mRNA.
ACCESSION   NM_001134730 XM_001060304 XM_341259
VERSION     NM_001134730.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3534)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3534)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC168193.1.
            
            On or before Sep 5, 2008 this sequence version replaced
            XM_001060304.1, XM_341259.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168193.1, FQ211679.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840115, SAMN12840131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3534              BC168193.1         1-3534
FEATURES             Location/Qualifiers
     source          1..3534
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q22"
     gene            1..3534
                     /gene="Lgalsl"
                     /gene_synonym="Hspc159; RGD1307414"
                     /note="galectin-like"
                     /db_xref="GeneID:360983"
                     /db_xref="RGD:1307414"
     exon            1..218
                     /gene="Lgalsl"
                     /gene_synonym="Hspc159; RGD1307414"
                     /inference="alignment:Splign:2.1.0"
     CDS             183..701
                     /gene="Lgalsl"
                     /gene_synonym="Hspc159; RGD1307414"
                     /note="lectin, galactoside-binding-like"
                     /codon_start=1
                     /product="galectin-related protein"
                     /protein_id="NP_001128202.1"
                     /db_xref="GeneID:360983"
                     /db_xref="RGD:1307414"
                     /translation="MAGSVADSDAVVKLDDGHLNNSLGSPVQADVYFPRLIVPFCGHI
                     KGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCI
                     SGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTI
                     KINGDLQITKLG"
     exon            219..290
                     /gene="Lgalsl"
                     /gene_synonym="Hspc159; RGD1307414"
                     /inference="alignment:Splign:2.1.0"
     exon            291..379
                     /gene="Lgalsl"
                     /gene_synonym="Hspc159; RGD1307414"
                     /inference="alignment:Splign:2.1.0"
     exon            380..557
                     /gene="Lgalsl"
                     /gene_synonym="Hspc159; RGD1307414"
                     /inference="alignment:Splign:2.1.0"
     exon            558..3511
                     /gene="Lgalsl"
                     /gene_synonym="Hspc159; RGD1307414"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacgcactgc ggccctcgcc accgtcatcc cctcgccgcc gcgacctccg cgccgcacac
       61 ctcccctccc cctcccgggc ctgcgaccgc gccagcctgg ggcgtgcgcg cgcgccggtg
      121 tgtgcgcgcg cccggctcgg acccgcgccc gccgccgcgt ccccggcgct cgctgcagga
      181 acatggcggg gtcggtggcc gacagcgacg ccgtggtgaa acttgatgat gggcacttga
      241 acaactccct gggttctccg gttcaagccg acgtgtactt cccacgactg atagttccat
      301 tttgtgggca cattaaaggt ggcatgagac caggcaagaa ggtattagtg atgggcatcg
      361 tagatctcaa ccccgaaagt tttgccatca gcttgacctg tggtgactct gaagatcctc
      421 ctgccgatgt ggcgattgaa ctcaaagctg tgttcacgga ccggcagctc ctcagaaact
      481 cttgtatatc aggagaaaga ggcgaagagc agtcagcaat cccttacttt ccgttcatcc
      541 cggaccagcc gttcagggtg gagattctgt gcgaacaccc tcgcttcaga gtgtttgtgg
      601 atggacacca gctctttgat ttttaccatc gtatccaaac gttatctgca attgacacca
      661 taaagatcaa tggggacctc cagatcacca aacttggctg atgttttaac gcacttctgt
      721 tgcaaatacg atcaatcagg tgccacatct acacatctac gtgactatct gaaagaagtg
      781 tcctagccag aactggagac tttaaaagaa aacaaaaaac aaaggcagac ttcgctgcct
      841 ctgtccgtgc agtttaagtc cagaacgaca gcttcgtctg tggtttgccc aggagaagca
      901 agctcccgag aaagccaccg agccattgcc cagaacaaag ttatacgttt atgctggatt
      961 ttattcagac taaactaaaa tggatttgcg atgatttgtg atttggtggc aattactcat
     1021 catcgcgaag caaggtgata tctagaaaca aaaagtgcta aagacctcaa aaacaaccac
     1081 ggtacaccaa cttgatgcat ttctgcactg acgtggaatt gcatagcaca acggacattt
     1141 tagtcagggt atttacatag aatgtagatt gtgcaaggtt cggtttttat gtctccttgg
     1201 gggttgtttt atttttttgg ttttgttttg ttttgttttt tctggcacag catcatgtta
     1261 acttggattt ttaagcattc tcaattaatt tatttatatt tagtatatgt attaatgtat
     1321 tagagaatga gcaatgtcta caaattatga acttaggtct gagggggaaa tttatgtatt
     1381 acaagcataa aataggtaga tttttaacct taaagaattt gagcttattc tccttacccc
     1441 tcaactttgg cttcttaaca caaattgcta taaatgcttt tggggaaatt tttgcaacac
     1501 ttcgataaaa ctctaaagtt cctgcctatg atgtgaactt ttgtttgcat tgcttcttct
     1561 ccttcctgtg aactagcaca gtattggctt ccttaagact cactactcct tagatttaca
     1621 tactagctca ttaagttgat attaaattga tggtaagcat ataagaggtg attgcacaga
     1681 cagcttttaa aataactgta tatcagttct taatagtatg ctatgaaagt gaatccagaa
     1741 tgcagtgtaa agcagaagca agtcgcccca aactacttac tgagaaataa cttatatcca
     1801 cctaggctgt tagctcattg tataattttt tcttctgaga ccctccctaa gtatccctaa
     1861 gcaatgcctc tggagcttct gagtagacag tgctgccttc ctggtccata agataggatc
     1921 cagtcaggcc atctgaaagg ttaagttcca ggatttcagg ttttgtcgtc cagccaatag
     1981 caatcatgct tccgggaaaa ctgcttccct gcgcttgtag aactaccaat agggtgcaga
     2041 ttatcagtgc atcttcaagg ctagggatgc ttggaatttc atacacagtt ttggtcctag
     2101 agagaagggc ctttggcatt gcaggtagtg gggaaggaag ggatgctggg tggggtatat
     2161 ttatatataa tttaggtttt gtttgtacag tgtatgtgtc ttactagggc atctccttgt
     2221 cctgcttcac ttttaaggtt ttttacacaa catgcagagg cactgaagtg gccatgtcct
     2281 cttcatgtgt caagaatgta gacagtgttt cagaaccaaa gtcttaagat aaacaaagca
     2341 aactaaaata aggaattttt atagatgata tatttggatt cttctcaact ttgaaactgt
     2401 ttagcacagt tccatggtgt tatatacaaa gacttgtcca ccaagaccag ctgcatcgtt
     2461 taaagcctca cattctagct ggcttcctag ccggtcagcc aggagagctg tcttggaggt
     2521 ccaggtattt ttttaagcct gtgagcaatt tctcgtggct tcaaaagcca ctttaagaga
     2581 gtttagagca caccctgaaa aacatttgta acgtttggat tcgattcatg cagtaagcat
     2641 gcccccagga gggctcatct gagtggccaa gcatgggtaa ttcagcagaa gcttagggaa
     2701 agagattaga agggactctt ctctctacct gtcagctaac tcagaggcag ccactccctt
     2761 aggctgcttg gtatggaaag cagtattaaa cctcccaggt cagcctcccg agggccatct
     2821 aagtggtgca ctaggttgac gttggactag ttaataagca ggggccacag cccactgtcc
     2881 aaatggctag ctagaaacta ggacaagttc acactttcct cagcctgaga ggtctaatgt
     2941 ggaaaattca ggattggaag tgcaatttag agcttcatgg ggaaagtatt tgcatacaca
     3001 aggggttctg tccacccagg gccctggctt tgcaataacc aataccaaga gataacagtc
     3061 aggctctggg gaaataagca ggctttagac aatctacagc aaagttggag taaatgtatc
     3121 tatcaagtta acagaagtga cttctgcttc ctgggctatc ccagaactgt cttaaaatta
     3181 atattttttt aaattttgaa gcccagtttc aaatcttgcc aacttctcta aaactcccta
     3241 agaggtcact cttaagagtt gatgatgaat taaatggcaa atccatgtgc attaagagaa
     3301 aaaaatatcc aaaaaaagga tcaagcccta ttgccttgcg aaaacagctt tggcattttc
     3361 tggcattaat gtaaagatac tgttcctatg atgacatatt ttcaaagaaa cactttctta
     3421 tttactgcgt ggtgtaaagt gttgttaagt gtgtgttaca ttatgtcact gctgaaagtt
     3481 atttgcacta taataaagga attttctaca aaaaaaaaaa aaaaaaaaaa aaaa
//
