LOCUS       NM_001013188            2569 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus leptin receptor overlapping transcript-like 1
            (Leprotl1), mRNA.
ACCESSION   NM_001013188 XM_341446
VERSION     NM_001013188.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Hirvonen,M.J., Buki,K.G., Sun,Y., Mulari,M.T., Harkonen,P.L. and
            Vaananen,K.H.
  TITLE     Novel interaction of Rab13 and Rab8 with endospanins
  JOURNAL   FEBS Open Bio 3, 83-88 (2013)
   PUBMED   23772379
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Apr 23, 2021 this sequence version replaced NM_001013188.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.442934.1,
                                           SRR22399489.2612582.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-84                JAXUCZ010000016.1  64744148-64744231
            85-160              JAXUCZ010000016.1  64750632-64750707
            161-347             JAXUCZ010000016.1  64753347-64753533
            348-2569            JAXUCZ010000016.1  64754555-64756776
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.2"
     gene            1..2569
                     /gene="Leprotl1"
                     /note="leptin receptor overlapping transcript-like 1"
                     /db_xref="GeneID:361160"
                     /db_xref="RGD:1307168"
     exon            1..84
                     /gene="Leprotl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             69..464
                     /gene="Leprotl1"
                     /note="endospanin-2"
                     /codon_start=1
                     /product="leptin receptor overlapping transcript-like 1"
                     /protein_id="NP_001013206.1"
                     /db_xref="GeneID:361160"
                     /db_xref="RGD:1307168"
                     /translation="MAGIKALISLSFGGAIGLMFLMLGCALPIYNQYWPLFVLFFYIL
                     SPIPYCIARRLVDDTDAMSNACKELAIFLTTGVVVSAFGLPVVFARAHLIEWGACALV
                     LTGNTVIFATILGFFLVFGSNDDFSWQQW"
     exon            85..160
                     /gene="Leprotl1"
                     /inference="alignment:Splign:2.1.0"
     exon            161..347
                     /gene="Leprotl1"
                     /inference="alignment:Splign:2.1.0"
     exon            348..2569
                     /gene="Leprotl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgccgc gcgtctcggg tctccgggcc accgcccggg tcgtgaagcc aggagcgacg
       61 tcaccgccat ggcgggcatc aaagctttaa ttagtttgtc ctttggagga gctatcggac
      121 tgatgttttt gatgcttgga tgtgcccttc caatatacaa ccaatactgg cccctcttcg
      181 ttctcttctt ttacatcctc tcgcccattc cgtactgcat agccagaaga ttggtggacg
      241 acacagacgc catgagcaac gcttgtaagg agctcgccat attcctcacc acaggtgtcg
      301 tcgtctcggc ctttgggctc cctgtagtgt ttgccagggc acatctgatt gaatggggag
      361 catgcgcact tgttctcacc ggaaacacag tcatcttcgc gactattcta ggcttcttcc
      421 tggtcttcgg gagcaatgat gacttcagct ggcagcaatg gtgaagcgct gctgaactgt
      481 agtcacatgg acttctgtca tcggccgtcc gtccgtctgt ccgcccgccc gtgcacagga
      541 gaggggccgt gatgctgact tgttggcgag cctctggggg tgtcctaggt gctcccttct
      601 cactgttatc cgcctcctgt ttccacaggg acctgctaag gattaaaagg attttctctt
      661 ttggaaaagc ttgactgttt tcccacttct ctagcctatg ctttccatgg tgtcctgcta
      721 aatctcaata cgtacatgtt ttccctgttc agttgtttta aaatcagtat gcaatgttac
      781 acatttttta agatgtaatg accatttgca ctggtttagg aattcagaac ttctggctgt
      841 actatgggct aaagtacata ttttctctaa aaatcagtta gtctccatta taaaaaacta
      901 tacgtaagtt ttcatccagt caggatgcca tcactccagg taaatgcaaa catgcagagc
      961 gttgacacac tttatctact atttactcag tgcaaagata gctgcattta tacctcaggg
     1021 gggccgacta accctgccca tgccctccat aagggttgct ggttttacta gtggacaggt
     1081 gttttgtgaa ttgaaaatta ttttgtggaa ttgctataaa agagtgcttt tctcctcaac
     1141 tgttggaaga atttatgtta aactctaagg tacacgtgtg aaaagttcag agatccagtt
     1201 tatattcttg tttattatgg tcaaagcaag tgagttgccg tgtgggaaga agcgacgttg
     1261 gcttcccact gtctgagtgc tgtcttcatc tgtggtgacg agtgtgagct ccgtcacctc
     1321 tcatggtttg gaggacaaaa gggatatgca tggaacaggt gtgtgtttgc agtgtagatg
     1381 ctcaaaaact tccctctgct tcctcctttt aacttatttt gtacattgta tatactaagt
     1441 aaaagaactt ttcaaatata gtttaataat gtttagaaat gtttgactac taggaaaccg
     1501 attgctatgc catacgttca gagtgcccct cccccacaag gccttgatgt gattcacaag
     1561 tgactcgtta gtcttgcagg taatccagga gcaaacagtt gtaagactta gacagtggaa
     1621 agagtagtct cccaacctta cagcacatgt attttaaaaa catttaaggc aggcttgctg
     1681 taaacctctc agttgtctgg gctttggttt catggtgatg gatctgctgt tgtaaggaag
     1741 gtatctattg tatgtgttaa tacagagtag ccaaatccag ctatgtcaga gcttcaaaca
     1801 cagacctgac caaaaatggt gaccaggcat gaccacatcg tagcagtcat ttgcttcttc
     1861 agttctcagt acttaaccta agagctggtt atgaaaatgt tcggactgat ccagcagtat
     1921 tttgtgagga catttgtatg tttctctggt gtgctcacat aaaaagaagt gttctgcctt
     1981 tagctgaaaa tgagtaacca tgacaactgt cttttgttgt tttttttttc tacagtttat
     2041 ttctcaaaaa aacaaacaaa aacagcaaaa cccagaaaaa tgcaccaagt ttgttcagct
     2101 ttttactaaa gacgcctaaa gctgcagttt ttattttgtt tttgtttgcc ttgacccatg
     2161 tttcattacc tttggctggg aggtgggaag cagtatgaaa tgcccaaatg cggctgtgcc
     2221 gtttgtgggt tagaccagaa atggcttgtt gagtaatgat gagggagact cgagggcggg
     2281 tgtggacatg gtcagagccc tgcctgggat cagggtggag cgggaggttc ctccttcaca
     2341 cacgaagtgc tgagcgcttg gccgtagcct cctcttctaa cagctgcaca ttctttctgg
     2401 gtactaatct tagcagcatt gcttgtccca catgacactg gcttgccagt ctcatctctg
     2461 gttcctaggc tggctactca caagtaagca ccaacgcatt gtcattctgc ggtggagaga
     2521 gagagaactt ttgatgacga aacaataaag attttaaata tccgtttta
//
