LOCUS       XM_232777               1862 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus leucine decarboxylase 1 (Ldc1), mRNA.
ACCESSION   XM_232777
VERSION     XM_232777.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_232777.9.
            
            On Jan 21, 2021 this sequence version replaced XM_232777.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1862
                     /gene="Ldc1"
                     /note="leucine decarboxylase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins, and 63% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:297899"
                     /db_xref="RGD:1562036"
     CDS             48..1421
                     /gene="Ldc1"
                     /codon_start=1
                     /product="antizyme inhibitor 2"
                     /protein_id="XP_232777.5"
                     /db_xref="GeneID:297899"
                     /db_xref="RGD:1562036"
                     /translation="MRGTEERGWVHKTVLSMMPELCMANISTRVSGMTTPSEGRREPL
                     GVTESLWPSEPITLGPETSARQLVLKKIQDLSISGHQDPFMVADLDVLASRHQTFLQA
                     LPRVWPFYAVKCNNRPSLLLVLAALGTGFDCASQGELEQVLGLGVAPSRIIFANPCKA
                     VSHIQYAARCGVQLLTFDSEEELTKLARHHPGARLILRIQTLGGRSTFPLHTKFGARL
                     LACGRLLQVARELGLAVVGASFHVGSDCHTPQSYRQAIADCHRVFEMGCKAGHQMSLL
                     DLGGGFPGIEGSEAKFEEMARVVNAALAQYFPEGTGVEVIAEPGRFYAESVCTAAVNI
                     IAKKASLEPGGHRKLAYYLNEGHYGAFRIFLRDPVPRIPIVVKELPSDPHLFPCTLYG
                     PTCDAFDRLFSTEVQLPELDVGDWLVFPDMGAYRSTMSSTFNGFPITTVYDAMSPQLR
                     SLLETVP"
ORIGIN      
        1 catggggttc agtgggaccc agcctccgtg acttggttat cctcgctatg cgagggacgg
       61 aagaaagagg ctgggtccac aaaactgtcc tttctatgat gccagaactg tgcatggcaa
      121 acatctcaac tagagtctca gggatgacca ccccctctga gggtaggagg gagccgctgg
      181 gagtcacaga aagcctgtgg ccatcagagc ccatcaccct ggggccggag acatctgccc
      241 ggcagctggt cctgaagaag atccaggact tgtccatctc gggccaccaa gaccccttca
      301 tggtggctga cttggatgtg ctggccagcc gacatcagac cttcctccag gccctgcccc
      361 gagtctggcc cttctacgcg gtcaagtgta acaataggcc cagcctgctg ctcgttttgg
      421 ctgccctggg caccggcttt gactgtgcca gccaggggga gctggagcag gtgctgggct
      481 tgggcgtggc cccctcacga atcatcttcg ccaatccctg caaggccgtc tcccacatcc
      541 agtacgcagc ccgctgtggg gtgcagcttc tgacctttga cagtgaggag gagctgacta
      601 agctggcccg gcaccaccct ggggctaggt tgatcctccg gatacagacc ctgggtggtc
      661 gaagcacctt cccactgcac accaagttcg gagcccgttt gttggcatgt ggacgcctgc
      721 tccaagttgc cagagagctg gggttggctg tggtgggggc ctccttccac gtgggttccg
      781 actgccacac accccagagc tacaggcagg ccatcgctga ctgccatcgt gtgtttgaga
      841 tgggctgcaa ggctggccac caaatgagcc tcctggatct tggtgggggc ttcccaggaa
      901 ttgagggctc tgaagccaaa ttcgaggaga tggcgagagt ggtcaacgct gccctggcac
      961 agtacttccc tgaggggacc ggtgtcgagg tcattgcgga gcctggccgc ttctatgcag
     1021 agtccgtgtg tacagctgcc gtgaacatca tagccaagaa ggcctccctg gagccaggag
     1081 gccacaggaa gctggcatac tacctcaatg agggccatta tggtgccttc cgaatctttc
     1141 tcagggatcc tgtccccagg atacccatag tggtaaagga gttaccctcg gatccccatc
     1201 tcttcccctg tactctttat ggccccacct gcgatgcctt tgaccggctc ttttcaacag
     1261 aggttcagtt gccagagctg gatgtgggtg actggctggt tttccctgac atgggtgcct
     1321 accgtagcac catgagttcc accttcaatg gcttcccaat cacaactgtc tatgatgcca
     1381 tgagccctca actcaggagc ctactggaga cagtacctta agccaagaca tggccatact
     1441 ggaaaggaga cagatacctg tctctgccag gcctttcaag acccactaag ttgtgtcaca
     1501 acccattccc accttctgag ggaatcttcc agcatccttg acctgaagag aatcccccac
     1561 cgtcagacat ccagcggaga gtgtgggctg gagacccttc ctgtgaatgt gggaaaggct
     1621 cagccctcag gacagtgtga tgctcatttg gcctctccac agcttgcaac ttaggagcag
     1681 aaacattaat ctctatctat caaaggagtt tcaaattaca gatatgattg ggctttggcg
     1741 agaataaaaa ctatttagat gcaagagctg gtgtgttctg cttgttctgt gggtgtagtt
     1801 atctaggagt atgaatattt atatccatcc atccatccat gcatctataa tccatccatc
     1861 at
//
