LOCUS       NM_001106560             807 bp    mRNA    linear   ROD 23-APR-2024
DEFINITION  Rattus norvegicus lipocalin 9 (Lcn9), mRNA.
ACCESSION   NM_001106560 XM_001078088 XM_231077
VERSION     NM_001106560.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Li,X., Zhan,X., Liu,S., Hu,S., Zhu,C., Hall,S.H., French,F.S.,
            Liu,Q. and Zhang,Y.
  TITLE     Cloning and primary characterizations of rLcn9, a new member of
            epididymal lipocalins in rat
  JOURNAL   Acta Biochim Biophys Sin (Shanghai) 44 (10), 876-885 (2012)
   PUBMED   23017836
  REMARK    GeneRIF: Data indicate that Lcn9 exhibited tissue-, region-, and
            temporal-specific expression patterns and its expression was
            regulated by luminal testicular factors.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474001.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001078088.1, XM_231077.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ537496.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..807
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /note="lipocalin 9"
                     /db_xref="GeneID:296578"
                     /db_xref="RGD:1306341"
     exon            1..110
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /inference="alignment:Splign:2.1.0"
     CDS             12..551
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /note="epididymal-specific lipocalin-9"
                     /codon_start=1
                     /product="epididymal-specific lipocalin-9 precursor"
                     /protein_id="NP_001100030.1"
                     /db_xref="GeneID:296578"
                     /db_xref="RGD:1306341"
                     /translation="MVLVVLVLGLALDLANAQFNLHIAVGKNYNMARISGVWHLVSMA
                     SDNMTYIEEKGDLRLFIRNIQFLNNSNLQFDFHIMIHGECVAVTVVCEKTKNSGEFSI
                     AYEGENKVLLVETDYTMYAIFHMQNIKNGTRTQVLALYGRFMQIDETYQERFENICKL
                     YGLGSQNIIDMTNKDFCYL"
     exon            111..247
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /inference="alignment:Splign:2.1.0"
     exon            248..321
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /inference="alignment:Splign:2.1.0"
     exon            322..432
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /inference="alignment:Splign:2.1.0"
     exon            433..534
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /inference="alignment:Splign:2.1.0"
     exon            535..580
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /inference="alignment:Splign:2.1.0"
     exon            581..807
                     /gene="Lcn9"
                     /gene_synonym="RGD1306341"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caccagagac aatggtgctg gtggtattag tgctaggcct ggcgctggac ctggccaacg
       61 cgcagttcaa cttgcacatt gccgtgggga aaaactacaa tatggccagg atttctgggg
      121 tctggcacct tgtttccatg gcctcagaca acatgacgta cattgaggaa aaaggagacc
      181 tgaggctctt catccggaac atccagtttt taaacaacag caacctgcag tttgacttcc
      241 acatcatgat acacggagaa tgtgtagccg tgaccgtggt ctgtgagaag actaagaata
      301 gtggggagtt ctccattgcc tatgaggggg aaaacaaggt gctgctcgtg gagactgact
      361 acacaatgta tgccatcttc cacatgcaga acatcaagaa cgggaccagg acccaagtgc
      421 tggcgctcta tgggcgcttc atgcagattg acgagactta ccaggaaaga tttgaaaaca
      481 tctgtaaact gtacgggctg ggctcacaaa acatcatcga catgacaaac aaagattttt
      541 gctatttata gacgttaaga ggagccagcc aggccttctg ctttgcaccc cagagacctg
      601 agatccaggc actgtggagc cagccctggg catcctctct ccgatgctgg cctgtggtca
      661 tctgtccatg gcctcggtct cggtcttcac aggaccctgt gtgtctgtat ttcttcctct
      721 gcctttagat gtaagccgcc caggcatcca aactgatctt acctcatgta cgaagacctt
      781 tgccaaataa atttcctcct ttagttt
//
