LOCUS       NM_024136                718 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus lipocalin 5 (Lcn5), mRNA.
ACCESSION   NM_024136
VERSION     NM_024136.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Newcomer,M.E.
  TITLE     Structure of the epididymal retinoic acid binding protein at 2.1 A
            resolution
  JOURNAL   Structure 1 (1), 7-18 (1993)
   PUBMED   8069623
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Girotti,M., Jones,R., Emery,D.C., Chia,W. and Hall,L.
  TITLE     Structure and expression of the rat epididymal secretory protein I
            gene. An androgen-regulated member of the lipocalin superfamily
            with a rare splice donor site
  JOURNAL   Biochem J 281 (Pt 1) (Pt 1), 203-210 (1992)
   PUBMED   1731756
REFERENCE   3  (bases 1 to 718)
  AUTHORS   Moore,A., Hall,L. and Hamilton,D.W.
  TITLE     An 18-kDa androgen-regulated protein that modifies
            galactosyltransferase activity is synthesized by the rat caput
            epididymidis, but has no structural similarity to rat milk
            alphalactalbumin
  JOURNAL   Biol Reprod 43 (3), 497-506 (1990)
   PUBMED   2125511
REFERENCE   4  (bases 1 to 718)
  AUTHORS   Newcomer,M.E. and Ong,D.E.
  TITLE     Purification and crystallization of a retinoic acid-binding protein
            from rat epididymis. Identity with the major androgen-dependent
            epididymal proteins
  JOURNAL   J Biol Chem 265 (22), 12876-12879 (1990)
   PUBMED   2165489
REFERENCE   5  (bases 1 to 718)
  AUTHORS   Brooks,D.E., Means,A.R., Wright,E.J., Singh,S.P. and Tiver,K.K.
  TITLE     Molecular cloning of the cDNA for two major androgen-dependent
            secretory proteins of 18.5 kilodaltons synthesized by the rat
            epididymis
  JOURNAL   J Biol Chem 261 (11), 4956-4961 (1986)
   PUBMED   2420796
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from X59831.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: X59832.1, M12790.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680451 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..718
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /note="lipocalin 5"
                     /db_xref="GeneID:29552"
                     /db_xref="RGD:69320"
     exon            1..140
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /inference="alignment:Splign:2.1.0"
     CDS             45..611
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /note="epididymal retinoic acid-binding protein;
                     epididymal-specific lipocalin-5; ESP-I; E-RABP; epididymal
                     secretory protein I; androgen-dependent epididymal 18.5
                     kDa protein"
                     /codon_start=1
                     /product="epididymal-specific lipocalin-5 precursor"
                     /protein_id="NP_077050.1"
                     /db_xref="GeneID:29552"
                     /db_xref="RGD:69320"
                     /translation="MENIMPFALLGLCVGLAAGTEGAVVKDFDISKFLGFWYEIAFAS
                     KMGTPGLAHKEEKMGAMVVELKENLLALTTTYYSEDHCVLEKVTATEGDGPAKFQVTR
                     LSGKKEVVVEATDYLTYAIIDITSLVAGAVHRTMKLYSRSLDDNGEALYNFRKITSDH
                     GFSETDLYILKHDLTCVKVLQSAAESRP"
     exon            141..277
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /inference="alignment:Splign:2.1.0"
     exon            278..357
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /inference="alignment:Splign:2.1.0"
     exon            358..462
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /inference="alignment:Splign:2.1.0"
     exon            463..564
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /inference="alignment:Splign:2.1.0"
     exon            565..590
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /inference="alignment:Splign:2.1.0"
     exon            591..616
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /inference="alignment:Splign:2.1.0"
     exon            617..718
                     /gene="Lcn5"
                     /gene_synonym="Erabp"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtggcttct ggttggggag ccagtgtgtc ctattgctat ccatatggag aatatcatgc
       61 ccttcgcctt gctgggactg tgtgtggggc tggcagctgg cacagagggt gcagtggtga
      121 aggacttcga cataagcaag tttttaggct tctggtatga gattgccttt gcctccaaga
      181 tgggtacacc tggcttggca cacaaggagg agaagatggg agccatggtg gtcgagctga
      241 aagagaacct tctggctctg accaccacct actacagtga ggaccactgt gtgctggaga
      301 aggttacagc tactgagggg gatggtccgg cgaagtttca ggtcaccaga ctatcaggaa
      361 agaaagaagt tgttgttgaa gccaccgact acctgaccta tgccataatt gatatcacct
      421 ctttggtggc tggggcagtc catcggacca tgaaactgta cagccggagt ttggacgaca
      481 atggggaagc cctttataat ttccggaaga taacctcgga ccatggcttt tcagaaacgg
      541 acctatacat cctcaagcat gacttaacct gtgtgaaggt attgcaatcg gctgctgaat
      601 caaggccctg aagcagggat ggatctgagg aggaagcagc agctcggcct acctggcctc
      661 tccttcccta cccaaggggt ccccacacct gtgcaaaata aagcttgcta ccacccgc
//
