LOCUS       XM_006233907             543 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus lipocalin 4 (Lcn4), mRNA.
ACCESSION   XM_006233907
VERSION     XM_006233907.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006233907.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..543
                     /gene="Lcn4"
                     /note="lipocalin 4; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:681375"
                     /db_xref="RGD:1596715"
     CDS             1..543
                     /gene="Lcn4"
                     /codon_start=1
                     /product="vomeronasal secretory protein 2"
                     /protein_id="XP_006233969.1"
                     /db_xref="GeneID:681375"
                     /db_xref="RGD:1596715"
                     /translation="MKSLLLTVILFSLVAILQSHDDLPFLSEEEKLSGVWFIKATVNQ
                     RRKEEEKTLVVFPIRLTCPEEGTLELRHTLISEGECIKLGVRMQRTEEPGQYSSFLGH
                     NLFYIYEVPVKDHYIIYTESHPFRKISQTGHLIGKYPEEKLEALEVFKEFIQHKGFLQ
                     ENIIVPEQRERCIPIHDSGK"
ORIGIN      
        1 atgaagagcc tactcctgac tgtcatactt ttcagtctag tggcgattct acaaagccat
       61 gatgatcttc ccttcctctc agaagaagag aaactttcag gtgtctggtt cataaaggcc
      121 acagtgaatc aaaggagaaa ggaggaggag aaaactctgg ttgtattccc tatcaggttg
      181 acatgcccag aagaaggaac cttggagctc aggcacactc ttatatctga gggagaatgc
      241 attaagctag gagttcgtat gcagagaaca gaggagcctg gtcaatacag ttcctttttg
      301 ggccataatc tcttctacat ctatgaagtt ccagtgaagg accactacat catatacacc
      361 gaaagccatc catttcggaa aatatcccaa acaggacacc tcataggaaa gtatccagaa
      421 gaaaaactgg aggccttgga agtatttaag gaattcatac agcacaaagg atttctccaa
      481 gaaaacatca ttgtgcctga gcagagggaa cggtgtattc ccatacatga cagtggtaag
      541 taa
//
