LOCUS       XP_038969007             376 aa            linear   ROD 22-FEB-2024
DEFINITION  lysocardiolipin acyltransferase 1 isoform X1 [Rattus norvegicus].
ACCESSION   XP_038969007
VERSION     XP_038969007.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_039113079.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086024) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jul 23, 2024 this sequence was replaced by
            NP_001418860.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..376
                     /product="lysocardiolipin acyltransferase 1 isoform X1"
                     /calculated_mol_wt=44435
     Region          55..248
                     /region_name="LPLAT_LCLAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LCLAT1-like; cd07990"
                     /db_xref="CDD:153252"
     Site            order(85,88,90,111..114,166..168)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153252"
     Region          233..307
                     /region_name="Acyltransf_C"
                     /note="Acyltransferase C-terminus; pfam16076"
                     /db_xref="CDD:465006"
     CDS             1..376
                     /gene="Lclat1"
                     /coded_by="XM_039113079.2:240..1370"
                     /db_xref="GeneID:362702"
                     /db_xref="RGD:1565906"
ORIGIN      
        1 mvswkgiyfi lflfagsffg sifmlgpilp lmfinlswyr wissrlvamw ltlpvallet
       61 mfgvkvvitg dafvpgersv iimnhrtrvd wmflwnclmr ysylrlekic lksslksvpg
      121 fgwamqvaaf ifihrkwkdd kshfedmvdy fcaiheplql lifpegtdlt ennkarsndf
      181 aeknglqkye yvlhprttgf tfvvdrlrer rnldavhdit vaypynipqt ekhlllgdfp
      241 keihfhvhry pvdtlptske dlqlwchkrw eekeerlrsf yqgeknfhft gqstvppcks
      301 elrvlvvkll silywalfcs amclliylys pvrwyfiisi vffvlqerif ggleiielac
      361 yrflhkhphl nskkne
//
