LOCUS       NM_001408839             565 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus late cornified envelope 3E (Lce3e), mRNA.
ACCESSION   NM_001408839
VERSION     NM_001408839.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Niehues,H., Tsoi,L.C., van der Krieken,D.A., Jansen,P.A.M.,
            Oortveld,M.A.W., Rodijk-Olthuis,D., van Vlijmen,I.M.J.J.,
            Hendriks,W.J.A.J., Helder,R.W., Bouwstra,J.A., van den
            Bogaard,E.H., Stuart,P.E., Nair,R.P., Elder,J.T., Zeeuwen,P.L.J.M.
            and Schalkwijk,J.
  TITLE     Psoriasis-Associated Late Cornified Envelope (LCE) Proteins Have
            Antibacterial Activity
  JOURNAL   J Invest Dermatol 137 (11), 2380-2388 (2017)
   PUBMED   28634035
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582424.2174853.1,
                                           SRR22582416.1729820.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-48                JAXUCZ010000002.1  181274092-181274139
            49-565              JAXUCZ010000002.1  181274749-181275265
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..565
                     /gene="Lce3e"
                     /note="late cornified envelope 3E"
                     /db_xref="GeneID:100361951"
                     /db_xref="RGD:2319129"
     exon            1..48
                     /gene="Lce3e"
                     /inference="alignment:Splign:2.1.0"
     exon            49..565
                     /gene="Lce3e"
                     /inference="alignment:Splign:2.1.0"
     CDS             66..362
                     /gene="Lce3e"
                     /note="late cornified envelope protein 3D-like"
                     /codon_start=1
                     /product="late cornified envelope 3E"
                     /protein_id="NP_001395768.1"
                     /db_xref="GeneID:100361951"
                     /db_xref="RGD:2319129"
                     /translation="MSCQQSQKQCQPPPKCPSPKCSPKCPPKSTAQCLPAASSCCATS
                     SGGCSVPSSEGGCCLSHHRRRSHRCRRRSSSSCDRGSGQQSGGSGCGHSSGGCC"
ORIGIN      
        1 ccacagcctc ttcagcagag ccctcttctc ctgcctttgc tgtatctggt caagttcctg
       61 ccaagatgtc ctgccagcag agccagaagc agtgccagcc tcctcccaag tgcccctccc
      121 cgaagtgctc cccaaagtgc cccccaaaga gcacagcaca gtgtctgcct gcagcttctt
      181 cctgctgtgc tacaagctct gggggctgca gtgtccccag ctctgaggga ggctgctgcc
      241 tgagccacca caggcgcagg tcccacagat gcaggcgcag gagctccagt tcctgtgacc
      301 gtggcagtgg tcagcagtct gggggttcag gctgtggtca ctcctctggg ggctgctgct
      361 aacctggagc atgatgctga gacatgagag tctggaggaa agacatatcc caggggtcaa
      421 ggagagccca gccagtcttg tcttctctga tcctggagag cattgtctgc ttgtatgatg
      481 tccaggtccc tcgttcccgc ccttcctgtg gagtcccatt gcctatccct gattttgacc
      541 aagaataaac cttctgttcc catca
//
