LOCUS       NM_001109493             687 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus late cornified envelope 1E (Lce1e), mRNA.
ACCESSION   NM_001109493 XM_001066620
VERSION     NM_001109493.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall
            R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Cote AG,
            Daley M, Deimling S, Desbuleux A, Dricot A, Gebbia M, Hardy MF,
            Kishore N, Knapp JJ, Kovacs IA, Lemmens I, Mee MW, Mellor JC,
            Pollis C, Pons C, Richardson AD, Schlabach S, Teeking B, Yadav A,
            Babor M, Balcha D, Basha O, Bowman-Colin C, Chin SF, Choi SG,
            Colabella C, Coppin G, D'Amata C, De Ridder D, De Rouck S,
            Duran-Frigola M, Ennajdaoui H, Goebels F, Goehring L, Gopal A,
            Haddad G, Hatchi E, Helmy M, Jacob Y, Kassa Y, Landini S, Li R, van
            Lieshout N, MacWilliams A, Markey D, Paulson JN, Rangarajan S,
            Rasla J, Rayhan A, Rolland T, San-Miguel A, Shen Y, Sheykhkarimli
            D, Sheynkman GM, Simonovsky E, Tasan M, Tejeda A, Tropepe V,
            Twizere JC, Wang Y, Weatheritt RJ, Weile J, Xia Y, Yang X,
            Yeger-Lotem E, Zhong Q, Aloy P, Bader GD, De Las Rivas J, Gaudet S,
            Hao T, Rak J, Tavernier J, Hill DE, Vidal M, Roth FP and Calderwood
            MA.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474068.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001066620.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BF552649.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN16093046, SAMN16093050 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..687
                     /gene="Lce1e"
                     /gene_synonym="Lce1l"
                     /note="late cornified envelope 1E"
                     /db_xref="GeneID:686125"
                     /db_xref="RGD:1585474"
     exon            1..48
                     /gene="Lce1e"
                     /gene_synonym="Lce1l"
                     /inference="alignment:Splign:2.1.0"
     exon            49..687
                     /gene="Lce1e"
                     /gene_synonym="Lce1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..496
                     /gene="Lce1e"
                     /gene_synonym="Lce1l"
                     /note="late cornified envelope 1L"
                     /codon_start=1
                     /product="late cornified envelope 1E"
                     /protein_id="NP_001102963.1"
                     /db_xref="GeneID:686125"
                     /db_xref="RGD:1585474"
                     /translation="MSCQQNQQQCQPPPKCPPKCQTPKCPPKCPPKCPPKCPPVSSCC
                     SLGSGGCCSSGGCCGSSSGGCCSSGGGGCCLSHHRPRRSFRRHRHSSGCCSSGGSSGC
                     CGSSGCCGSSGCCSSSGCCGSSGGSSGCCGSGQQSGDCC"
ORIGIN      
        1 cagtcttcac ccttaccagt ttcaggccct acttcttctg ctgaacagat ttacagactt
       61 cctctcaaaa atgtcctgcc agcagaatca gcagcagtgc caaccccctc ctaagtgccc
      121 tcccaagtgc cagactccta aatgccctcc aaagtgcccc cctaagtgcc ctcccaagtg
      181 cccccctgtg tcttcctgct gtagcctggg ttctgggggc tgctgcagct ctggtggctg
      241 ctgtggctcc agctctggtg gctgctgcag ctctggggga ggaggctgct gcctgagcca
      301 ccacagaccc cgcagatctt tccgtcgcca tcgccacagc tctggatgct gcagcagtgg
      361 tggcagcagt ggctgctgtg gcagcagtgg ctgttgtggc agcagtggtt gctgtagcag
      421 cagtggctgc tgtggcagca gtggtggcag cagtggttgc tgtggcagtg gccagcagtc
      481 tggggactgc tgctgacctg ggtcatgaag acttcagaca agcagtaaaa gaggcagcca
      541 tgttcacagg acctgctcct accgctatgc ctcccattcc ttcttgtctt ctgtgttctg
      601 gacttcaaga tgattaattt ttcagtgaag ttcaaattgt gccccttagt ctcatcccct
      661 tctgtgattc taaataaaat ctttcct
//
