LOCUS       NP_001402657             734 aa            linear   ROD 31-MAR-2024
DEFINITION  lebercilin-like protein [Rattus norvegicus].
ACCESSION   NP_001402657 XP_006248240
VERSION     NP_001402657.1
DBSOURCE    REFSEQ: accession NM_001415728.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 734)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Dec 27, 2022 this sequence version replaced XP_006248240.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.68694.1,
                                           SRR26360194.1966250.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q11"
     Protein         1..734
                     /product="lebercilin-like protein"
                     /note="Leber congenital amaurosis 5-like; LCA5L,
                     lebercilin like"
                     /calculated_mol_wt=82337
     Region          144..336
                     /region_name="Lebercilin"
                     /note="Ciliary protein causing Leber congenital amaurosis
                     disease; pfam15619"
                     /db_xref="CDD:464776"
     Region          <207..522
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          464..>733
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..734
                     /gene="Lca5l"
                     /coded_by="NM_001415728.1:281..2485"
                     /db_xref="GeneID:498065"
                     /db_xref="RGD:1562512"
ORIGIN      
        1 mrlwtmslad tteahtnehf pslalgsnrk saegkhspga gglsrnsras sgsvdysrsr
       61 csctsltsry dysedflsec setavsrhqp eqllgkekek rkyntckfpq pkgqkdipae
      121 krhiwnasff ssqiqtiakr rdtmthrils arlhkikelk neladihrkl eatilenqfl
      181 kqlqlrhlka igtyvnsqnn lpqitvkhqn evknlrqllr ksqekeravs rklretdsel
      241 lrtkdalqal qrlsedknla ereelthrlt dltakmeand kkiqnlekql rlnnrsfsrq
      301 lakenrktla aqtatkalqa evrqlqqklk ekdreleikn iytnrilknl hdkedypkvs
      361 stksvqadrk slpfvnvrhq etqksdvpfw itkdkkakgn ivhkekstei nhdisyhvrk
      421 lprqeeskrk ceanltvlkn mpsprvsweq vateqicafh lechsctqtd lskevehpkp
      481 qtsletprrp kerkedqekr aipeeaepta kgsevpedae dkalaraacd vgdagdagda
      541 gdadhasdag dvrdvvedse vigahelpga nqagevhgas eagdvepgrg rrktprsrkh
      601 ysfteatenl hhglptscrq asgsphcrcr hctgkhrseq elrlepagye psfgkaartr
      661 aratafrdrk sslmeelfgs gfagragpnd geapskspqp gpqasagnaf gdskatvars
      721 iqasppeanr ktav
//
