LOCUS       NM_001108154            2336 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus La ribonucleoprotein 6, translational regulator
            (Larp6), mRNA.
ACCESSION   NM_001108154 XM_001075260 XM_236338
VERSION     NM_001108154.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Manojlovic,Z. and Stefanovic,B.
  TITLE     A novel role of RNA helicase A in regulation of translation of type
            I collagen mRNAs
  JOURNAL   RNA 18 (2), 321-334 (2012)
   PUBMED   22190748
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Challa,A.A. and Stefanovic,B.
  TITLE     A novel role of vimentin filaments: binding and stabilization of
            collagen mRNAs
  JOURNAL   Mol Cell Biol 31 (18), 3773-3789 (2011)
   PUBMED   21746880
REFERENCE   3  (bases 1 to 2336)
  AUTHORS   Cai,L., Fritz,D., Stefanovic,L. and Stefanovic,B.
  TITLE     Nonmuscle myosin-dependent synthesis of type I collagen
  JOURNAL   J Mol Biol 401 (4), 564-578 (2010)
   PUBMED   20603131
  REMARK    Erratum:[J Mol Biol. 2016 Oct 9;428(20):4242-4243. PMID: 27485541]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473975.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001075260.1, XM_236338.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CO405660.1, CB748789.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132293, SAMD00132306
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..2336
                     /gene="Larp6"
                     /gene_synonym="RGD1308414"
                     /note="La ribonucleoprotein 6, translational regulator"
                     /db_xref="GeneID:315731"
                     /db_xref="RGD:1308414"
     exon            1..293
                     /gene="Larp6"
                     /gene_synonym="RGD1308414"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..1572
                     /gene="Larp6"
                     /gene_synonym="RGD1308414"
                     /note="death-associated LA motif protein; La
                     ribonucleoprotein domain family, member 6"
                     /codon_start=1
                     /product="la-related protein 6"
                     /protein_id="NP_001101624.1"
                     /db_xref="GeneID:315731"
                     /db_xref="RGD:1308414"
                     /translation="MAQLGEQTLPGPETTVQIRVAIQEAEDVEDLEEDDEGTSARAAG
                     DTARYLSPGWGSASEEEPSRGHSSATTSGGENDREDLEPEWKPPDEELIRKLVDQIEF
                     YFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLEL
                     NEDHRKVRRTTPVPLFPNENLPSKMLLVYDLHLSPKLWSLATPPKNGRVQEKVMEYLL
                     KLFGTFGVISSVRILKPGRELPPDIRRISSRYSQVGTQECAIVEFEEVDAAIKAHEFM
                     ATESQGKENMKAVLIGMRPPKKKPLKDKNHEDEPAAGTRLSRSLNKRVEELQYMGDES
                     SANSSSDPESNPTSPMAGRRHVASNKLSPSGHQNIFLSPNASPCSSPWSSPLAQRKGV
                     SRKSPLAEEGRLNFSTSPEIFRKCMDYSSDSSITPSGSPWVRRRRQAEMGTQEKSPGA
                     SPLLSRKMQTADGLPVGVLRLPRGPDDTRGFHGGHERGRACI"
     exon            294..504
                     /gene="Larp6"
                     /gene_synonym="RGD1308414"
                     /inference="alignment:Splign:2.1.0"
     exon            505..2336
                     /gene="Larp6"
                     /gene_synonym="RGD1308414"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtctccgccg cgcgcgcgcg ccgcccacgc gcgatcgtcg ctatcgctgg ctgcgggctg
       61 gcctggcctc gcggcacagg gaccctgcca gccatggccc agctcggcga acagactctg
      121 ccagggcccg agaccacggt gcagatccgt gtcgccatcc aggaggccga ggatgtggag
      181 gatctggagg aggacgacga ggggacatcg gcacgggcag cgggggacac agcccggtac
      241 ctcagtcctg gctggggcag cgccagcgag gaggagccga gccgcgggca cagtagtgcc
      301 acgacaagtg ggggtgagaa tgaccgcgag gatctggagc cagagtggaa gcctccggac
      361 gaggagctta tcaggaagct ggtggatcag attgagttct acttttccga tgagaatctg
      421 gagaaggacg cctttctgct caagcatgtg cggaggaaca agctgggcta tgtgagcgtc
      481 aagctgctca cctccttcaa gaaggtgaaa cacctcacac gggactggag gaccacagca
      541 cacgccttga agtattcggt caccctggag ttgaatgagg accaccggaa ggttaggagg
      601 accacccccg tgccgctgtt ccccaatgag aacctcccca gcaagatgct gctggtatat
      661 gatctccacc tgtcccctaa gctatggtcc ctggccacac ctccgaagaa cggaagggtg
      721 caggagaagg tgatggaata tctgctcaag ctctttggga cttttggagt catctcatcg
      781 gtgcggatcc taaaacctgg gagggagctg ccccctgaca tccggaggat cagcagccgc
      841 tacagccagg tggggaccca agaatgtgcc attgtggagt tcgaggaggt ggacgcggcc
      901 atcaaagccc acgaattcat ggccactgaa tctcagggca aagagaacat gaaggctgtc
      961 ctgattggga tgagaccgcc caaaaagaaa cccctcaaag ataagaacca tgaggatgag
     1021 cccgcagcgg gtacccgcct aagcagatcc ctgaacaaga gagtggagga gcttcagtac
     1081 atgggggatg agtcttccgc caacagttcc tctgaccctg agagcaaccc cacctctccc
     1141 atggctggcc ggcggcacgt ggccagcaac aagctcagcc cttctggcca ccagaacatt
     1201 ttcctgagcc cgaatgcctc cccgtgttca agcccgtgga gcagcccgtt ggcacaacgc
     1261 aagggcgtct ccagaaaatc cccactggct gaagaaggca gactgaactt cagcacgagc
     1321 cccgagatct tccgaaagtg catggactat tcttccgaca gcagcatcac tccctcgggc
     1381 agcccctggg ttcgcagaag acgccaagca gagatgggga ctcaggagaa aagtccaggg
     1441 gcaagtcccc tgctgtctcg gaagatgcag acagcagatg ggttaccggt gggggtgctg
     1501 aggctgccca gaggccctga cgacaccagg ggtttccacg ggggacacga gagaggcaga
     1561 gcttgtatat aataccttct atttttcata ctactccatt gaaaacaatc tttgttttcg
     1621 aggtgcccgc aaatagctag catgacagag aatggagttc agtcccctta gaaagctttt
     1681 gtatcagtgc agacctctta atttatatat ttgcaaggta tacaaactgt ctggtgcgcc
     1741 gtggttttag gatctggctg ggagctgtgg ttctcagcat ggacactatt ttgtcagtgt
     1801 ttggcatgta tacatgtgat gtctctaaag gctgtgggat agaggctctc tggaaaggtt
     1861 tagcattgtc gggactggtt tttgtttttt ttgttttttg tttttttttt ttccttacaa
     1921 tgactgagct gtccttggca ggccatgcaa gggctcctct taagacctca aaggagtttt
     1981 gctcaatggc agatccttca gtcagtagca tggtgtctta taggactgag tgtctgttcc
     2041 ctgtcacccg aataaagaat aaaacaccca ctggaagtcc tgtatcagag gccacagacc
     2101 gtacactttc aggaaggacc ccaatgggga catgttccct catagagctc acagtgttcc
     2161 ctcagggaag tctgggaccg tcctggaggc ttctggcagc ctgggaggtc tgtcaccgct
     2221 aggagtctca ctgaacaggc ggcttagatg gtttctgctg tctccacagc atcccaaacc
     2281 aacagcattt gacatcacct gagaactcag tagaaataaa catcgcgagg ccccag
//
