LOCUS       XM_008769856            4030 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus laminin subunit beta 3 (Lamb3),
            transcript variant X1, mRNA.
ACCESSION   XM_008769856
VERSION     XM_008769856.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008769856.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008769856.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4030
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4030
                     /gene="Lamb3"
                     /note="laminin subunit beta 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 15 ESTs, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     18 samples with support for all annotated introns"
                     /db_xref="GeneID:305078"
                     /db_xref="RGD:1562668"
     CDS             130..3648
                     /gene="Lamb3"
                     /codon_start=1
                     /product="laminin subunit beta-3 isoform X1"
                     /protein_id="XP_008768078.1"
                     /db_xref="GeneID:305078"
                     /db_xref="RGD:1562668"
                     /translation="MMTALFLLWLALPGLLCAQQPCSRGACYPPVGDLLIGRTQLLRA
                     SSTCGLTKPETYCTQYGQWQMKCCKCDSRLPRNYNSHRVENVVSSSGPMRWWQSQNDV
                     SPVSLQLDLDKRMQLQDIMMDFKGLMPAGMLIERSSDFGKTWRVYQYLATDCASTFPQ
                     VHQGQPKNWQDVRCRPLSQRPNGHLTGGKVQLNLMDLASAIPASQSKKIQELGDITNL
                     RVNFTKLAPVPQRGSYPPSAYFAVSQLRLQGSCFCHGHADRCAPNPGGPTGSTTAVQV
                     NDVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDIHECQRCDCNGHSETCHFDPAVFA
                     ASQGTSGGVCDNCQDHTEGKNCERCQLHYFRNRRPGAPIHETCIPCECDPDGAVPGAP
                     CDRLTGQCVCKDHVQGERCDLCKPGFTGLTFANPQGCHPCDCSILGTRQDMPCEEETG
                     RCLCLPNVVGPKCDQCAPSHWKLASGRGCEPCACDPRNSLSSQCNQFTGQCPCREGFG
                     GLTCSSAAIRQCPDRTHGDVATGCRACDCDFRGTEGPGCDKTSGRCLCRPGLTGPRCD
                     QCQRGYCDRYPVCVACHSCFQAYDTDLQEQAWRLGSLRNTTEGLGTGTGLEDRGLASR
                     LLDAKSKIEQIRQILGGTSVTERDVAQVANAILSIRRTLQGLPLDLPLEEEMESFSGD
                     LGNLDRSFNRLLLMYRSKKEQFEKLSSVDPSGAFRMLTMAYEQSSRAAQQVSDSSSLL
                     SQLRDSRREVEGLERQTGEGGAGGAQLMALRLEMASLPDLTPTINKLCGGSRQTACTP
                     GDCPGLLCPQDNGTACGSHCRGALPRARGALHMAGQVAEQLRSFNTQLQQTRQMIRAA
                     EEAASKVQSDAQRLETQVSTSRLQMEEDVRRTRLLIQQVRGFLTDPHTDAATIQQVSE
                     AVLALWLPTDSATVLRKMKEIQDIAARLPNVDLVLSQTKQDIARARRLQAEAEKARSR
                     AHVVEGQVDDVVGNLRQGTVALQEAQDTMQGTGRSLRLIQERVTEVQQVLVPAERLVK
                     GMKEQMSGFWARVKELRHQAQEEQAQAMKAQQLAEGASNQAMNAQEGFERLKQRYTEL
                     KDRLGQSSMLGEQGNRILSIKAEAEELFGETMEMMDKMKDMESELLRGSQAIMLRSAD
                     LSGLEKRVEQIRSYINGRVLYYATCK"
ORIGIN      
        1 cctgagggtg ggggtgcagt gacgtcagat gggcgtgtcg actgccagat tcctgaggct
       61 gccagcggtg gggctacacc cagccaggga gtctccagag gtgacctctc tggggacctg
      121 cactggccca tgatgacggc acttttcctc ttgtggcttg ccttgcctgg cctcctgtgt
      181 gcccagcaac cctgctcccg aggggcctgt tatccacctg ttggggactt gctcattgga
      241 aggactcagc ttcttcgagc ctcgtctacc tgtggattga ccaagcctga gacctattgc
      301 acccaatatg gacagtggca gatgaaatgc tgcaagtgtg actccaggct gcctcgcaac
      361 tacaacagtc accgagtgga gaacgttgta tcgtcttcag gccccatgcg ctggtggcag
      421 tcccagaacg atgtgagccc tgtctctctt caactggacc tagacaagag gatgcagctt
      481 caggacataa tgatggattt taagggtctc atgccagctg gcatgttgat tgagcgctct
      541 tctgactttg gcaagacatg gagggtgtac cagtacctgg cgacagactg tgccagcacc
      601 tttccccagg tccaccaggg ccagcccaag aactggcagg acgtccggtg ccggcccttg
      661 tcccagaggc ctaatgggca tctgactggg ggaaaggtcc aacttaacct tatggatttg
      721 gcatcagcta tccctgcatc tcaaagtaaa aagattcaag aactaggaga catcacgaac
      781 ttgagagtca acttcaccaa gctggcccca gtgccccaga ggggctccta tccacccagc
      841 gcctactttg cagtatcaca gctacgtcta caggggagtt gcttctgtca tggacatgcc
      901 gaccgctgtg cccctaatcc tggaggccct acaggttcca ccaccgctgt gcaggtcaac
      961 gatgtctgtg tctgccagca caacacagct ggccccaact gtgaccgctg cgcccccttc
     1021 tacaacaacc ggccatggag acctgcagag ggacaggaca tccatgagtg ccaaaggtgt
     1081 gactgcaatg ggcactcaga gacctgccac ttcgacccag ctgtgtttgc tgctagccaa
     1141 gggacaagtg gaggcgtgtg tgacaactgc caggaccaca cagagggcaa gaactgtgag
     1201 cgatgtcagc tacactattt ccggaataga cgaccaggcg ctcccattca tgagacctgt
     1261 attccctgcg agtgtgatcc agacggggca gtcccaggag ctccctgtga ccgactgacg
     1321 ggccagtgcg tgtgcaaaga ccacgtgcaa ggggagcgct gtgatctttg caagcctggt
     1381 ttcacagggc tcaccttcgc caacccacag ggctgccatc cctgtgactg cagcatctta
     1441 ggtacccggc aagatatgcc ttgtgaggag gaaactggac gctgcttgtg tcttcccaat
     1501 gtagtgggcc ccaaatgtga ccagtgcgcc ccttcccact ggaagctggc cagcggccgg
     1561 ggctgtgagc cctgtgcctg tgacccacgc aactccctca gctcccagtg caaccagttt
     1621 acagggcagt gtccttgtcg ggaagggttt ggtggcctca catgtagttc tgcagccatt
     1681 cgtcagtgtc ccgaccggac ccatggagac gtggccacag ggtgccgagc ctgtgactgt
     1741 gacttcagag gaaccgaggg tcctggctgt gacaaaacct caggccgttg cctctgccgc
     1801 cccggcttga cagggccccg ctgcgaccag tgccaacgag gctactgcga ccgctaccca
     1861 gtgtgtgtgg cctgccactc ttgcttccag gcctatgaca cagacctcca ggagcaggct
     1921 tggcgccttg gcagtctccg taataccact gaaggcctgg gcacagggac aggtctggag
     1981 gaccgtggcc tggcttctcg gttgctagat gccaagagca aaatcgagca gatcagacag
     2041 attctgggtg gcacctctgt cacagagcgg gatgtggctc aagtggccaa tgccatcctg
     2101 tctatcagga ggactcttca gggcctgccc ctggacctac ccttagagga ggagatggaa
     2161 tccttctctg gagacctggg gaatctagac agaagcttca atcgcctcct ccttatgtac
     2221 cggagcaaga aggagcagtt tgagaagcta agcagtgtgg acccttcagg agccttccgc
     2281 atgctgacta tggcttatga gcagtcctcc cgggctgcac agcaagtatc cgacagttcc
     2341 agcctgctga gccagctgag ggacagtcgc agagaggtag aaggtctgga gagacagact
     2401 ggagagggag gagctggagg agctcagctc atggccctgc gcctagagat ggcttcactg
     2461 cctgacttga cacccaccat caacaagctc tgtggtggct ctaggcagac agcctgcacc
     2521 ccaggagact gccctggatt gctgtgtccc caggacaatg gtacagcctg tggctctcac
     2581 tgcaggggag ccctgcccag agccagaggg gccttacaca tggcagggca ggtagctgag
     2641 cagctacgaa gcttcaatac ccagctccag cagaccaggc aaatgatcag ggcagctgag
     2701 gaggcagcat caaaggtcca atcagatgcc cagcgccttg agactcaggt gagtaccagc
     2761 cgcttacaga tggaggaaga tgtccggcgc acacggcttc tcatccagca ggtccggggc
     2821 ttcctcacag accctcacac agatgcagcc accatccaac aggtgagcga ggcagtgctg
     2881 gctctctggc tgcccacaga ctcagctaca gtgctacgca agatgaaaga gatccaggac
     2941 attgctgcca ggctccctaa cgtggactta gtgctatccc agactaagca ggacattgca
     3001 cgggcccgca ggctccaggc tgaggccgag aaggccagaa gccgagccca cgttgtggaa
     3061 gggcaggtgg atgacgtggt cgggaacctc aggcagggca ccgtggctct gcaggaggct
     3121 caggacacta tgcagggcac tggccgctct cttcggctca tccaggaaag ggttactgag
     3181 gttcagcagg tcctggtacc agctgaaagg ctggtgaaag gcatgaagga acagatgagt
     3241 ggattctggg cacgggtgaa ggagctccgc catcaggccc aggaagagca ggcacaggca
     3301 atgaaggccc agcagcttgc agagggtgcc agcaatcagg ccatgaatgc tcaggagggc
     3361 tttgagagac ttaagcaaag gtatacagag ttgaaagacc ggctgggtca gagttctatg
     3421 ctgggtgagc aaggcaatcg gatcttgagc atcaaggcgg aggcagagga gctctttggg
     3481 gaaaccatgg aaatgatgga taaaatgaaa gacatggagt cagagctgct tcgagggagt
     3541 caggccatca tgcttcgttc agcagacctg tcggggctgg agaagcgcgt ggagcagatc
     3601 cgcagttaca tcaacgggcg tgtgctgtac tatgccacct gcaagtgatc ttaagtccca
     3661 gcctcagaca attcccctcc ctgccttgga agggacacag gggaggggag gtgtttcctg
     3721 gacctagggc acttggatac cattgatagc atagtctggt caccatggac atgcttcaag
     3781 gtacctgact gccactgagc ctgtgcttgc ctgaccacac taaggagaga gatggtgcag
     3841 ggggtggggc tgtcacaact gaaaatcctc ccaaaaaggg agctggatgg acagagtgcc
     3901 cccaacacca actcctgccc tccactgtgg taaagtctgg gaccaactca aaaactgaac
     3961 aaagtgtgat gtacgaccac aaagtccaat aaaaatcttt ggacaggagc ctggaagctc
     4021 aataagaaaa
//
