LOCUS       XM_039113040             777 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus immunoglobulin heavy chain like 16
            (Ighl16), mRNA.
ACCESSION   XM_039113040
VERSION     XM_039113040.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086024) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 39% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..777
                     /gene="Ighl16"
                     /note="immunoglobulin heavy chain like 16; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 18 long SRA reads, 123 Proteins"
                     /db_xref="GeneID:691828"
                     /db_xref="RGD:7592549"
     CDS             16..777
                     /gene="Ighl16"
                     /codon_start=1
                     /product="uncharacterized protein Ighl16"
                     /protein_id="XP_038968968.1"
                     /db_xref="GeneID:691828"
                     /db_xref="RGD:7592549"
                     /translation="MSLELTLNLKQRGSSQDSHSLINKESTSLMMGLGVILFLVALLK
                     GVQCEVKLVESGGGLVQPGRSLKLSCAASGFNFNDYWMGWVRQAPGKGLEWIGEINKD
                     SSTINYTPSLKDKFTISRDNAQNTLYLQMSKLGSEDTAIYYCARATVRRTQHVPRQKH
                     NCVHSRVYLQQSGAGVMRPWTSVKVSCMASGYDFTMKYINLLKHKPGEKLEWIESIDP
                     GSSDAEYSRKLKGKVTLTAETSLIIAYMELNRLTS"
ORIGIN      
        1 tctcttctca ttaaaatgag cctggaacta accctgaatc tgaagcaaag aggatcatct
       61 caggattctc attcattgat caacaaggaa agcacatccc ttatgatggg tttaggggtg
      121 attctttttc ttgttgctct tttgaaaggt gtccagtgtg aggtgaaact tgtcgagtct
      181 ggaggtggcc tggtgcaacc tggaagatcc ttgaaactct cctgtgcagc ctctggattc
      241 aattttaatg attactggat gggctgggtc cggcaggctc cagggaaggg gctagaatgg
      301 attggagaaa ttaataagga tagcagtaca ataaactata ctccatcctt gaaggataaa
      361 ttcaccatct ccagagacaa tgcccaaaac actctgtacc tgcaaatgag caaactggga
      421 tctgaggaca cagccattta ttactgtgca agagccacag tgaggagaac acagcatgtg
      481 cccagacaaa aacataattg tgtccactct agggtgtacc tccagcagtc tggggctggg
      541 gtaatgaggc cttggacctc agtgaaagtg tcctgcatgg cttctggcta tgacttcact
      601 atgaaatata taaatttgtt gaagcataag cctggtgaga agctggagtg gattgaaagt
      661 attgatcctg gaagtagtga tgctgagtat tctcggaagt tgaagggcaa ggtgacactg
      721 actgcggaga catccttgat catagcatac atggagctca atagactgac atcttag
//
