LOCUS       XM_039106533            8099 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to NADH dehydrogenase
            (ubiquinone) 1 beta subcomplex, 4, 15kDa (LOC691675), mRNA.
ACCESSION   XM_039106533
VERSION     XM_039106533.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8099
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8099
                     /gene="LOC691675"
                     /note="similar to NADH dehydrogenase (ubiquinone) 1 beta
                     subcomplex, 4, 15kDa; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 4 ESTs, 2 long
                     SRA reads, 6 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:691675"
                     /db_xref="RGD:1597219"
     CDS             1870..2259
                     /gene="LOC691675"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 4-like"
                     /protein_id="XP_038962461.1"
                     /db_xref="GeneID:691675"
                     /db_xref="RGD:1597219"
                     /translation="MSFSKYKPATLATLPSTLDPAEYDVSLETRKAQVERMSIRARLK
                     REYLLQYNDPKCQTHIEDPALIRWTYARSANVYPNFRPTPKNSLLGVVAGLGPLIFWY
                     YVIKTDRDKKERLIQEGKLDRKFSISY"
ORIGIN      
        1 tttacatttc gattgttatt ccctttcccg gtttcagggc caacatcccc caacccctcc
       61 ctaggctgaa aatgtttatc ttgatgagaa tatttttcta atttatagaa aatcacaaac
      121 atacagtggt ttaattagca ttaggtcttc ctctgtaagt cccttcacaa ctgaagatag
      181 tcatcatata tatatatgat ttttcttttt ttttttcttt tttttttttt ttttgcttga
      241 gacagtctta ctctggccca gtctggcctt acaacccatg gcaatcctcc tgccttagcc
      301 tcccaagtgc taggattata ggagtgaagg agctaccatg tttggccttc aaccagatta
      361 tagtgaggaa aatccaaatc atttcagtac tttaataaat tttataaaat agttttcact
      421 tagaaagctt tatttttgtg tgtggacata catgccgcat ggtatgtatc agtggacaac
      481 ctgggaatca gttatctcaa gtatgctttt ttaagattta tttttatata tgagtacact
      541 gtagctgtct tcagacacac cagaagaagg catcagatct cattacagat ggttatgagc
      601 caccatgtgg ttgctgggat ttgaactcag gacctctgga agagtagtct gagcatcttt
      661 ccagccctca agtatgttct ttttattgaa aagtatttac ttattctatg tgttgtactg
      721 ggccattgca aataaattag ttacttattt agtgtttggt tggaggcttt taaagattaa
      781 ttgtatattg tctgtctgca agcgcatatg tgcagcatat gtatgcctga tgctcatgga
      841 ggttagaaga gggcatcaga tgctattgaa ctggagttag aattgtgagc caggtcttct
      901 acaagagcag taagtgctct aaaccaccga tccatctttc cagctccagt tctcggcttt
      961 ttggccttga tattgcttag ccaggaatta aagtaaaatt ggttgataat cattgaacat
     1021 gagacaggta agcattgagc tggaacaaaa caggattaaa tggagtagaa tttactgaaa
     1081 caattatttt gacttatgga agacggtaga acatttttct tttaaaaact gaattttaat
     1141 gagaaggcta gccttgtcag ttctgaagct gcttagagca gaaactacat aatttacata
     1201 gtactaaaat tttttttcct gtgagaaatt gtatggtatc ctgtggcctg gagatatagc
     1261 tcagttggta gagtgcttgc ctaagataca tgaaattctg ggttccattt ctagcactat
     1321 gtaaacttgg tatgatagtg gtactcctcc tataatttca tcgctcagga taagaagatc
     1381 aaggtctact catagggagt gtcttaggtt tttattgctg tgaagagaca ctatgaccaa
     1441 ggtaactctt ataaaagcat acctttaatt ggtgctggct gacagtttca gaggttcagt
     1501 ccattatcat ggtgggaagc atggcagcat gcaggcagac ctggtgctgg agaaaccaag
     1561 agttttacat tttgatccga aggcagccag aatcagagac tctctcacag gcagccagga
     1621 ggaggctctt ttccacactg ggcagaactt gagcataggt ggagccctca aagcccactc
     1681 cacagtgaca ctttttccag caaggccaca cctccaaata gtgccactcc ccatgggcca
     1741 accattcaaa atctgtggag gtcaaaccta ttcaaatcac catagggagt ttgaggaggc
     1801 tctgggctac tcagctttta aaaaggaaaa aaaaaaaagc gcaggcgcaa atgttcgccg
     1861 ggagccaaga tgtcattttc caagtataag cctgcaaccc tggccactct ccccagtacc
     1921 ctcgaccctg ccgagtatga cgtgtctctg gagacccgaa aggcgcaggt cgagcgcatg
     1981 agcataaggg cccggcttaa acgggagtat ctgcttcagt acaacgaccc caaatgccaa
     2041 acgcacatcg aggatcctgc cttgattcgt tggacctatg caagatcagc aaatgtttat
     2101 cctaatttca gacccactcc caagaactca cttttaggag tggtggcagg tttagggcct
     2161 ctcatcttct ggtattatgt tatcaaaaca gacagagaca aaaaggaaag acttatccag
     2221 gaaggaaaac tggacagaaa atttagcatc tcctactaag ttcagcaagg atgcctctgt
     2281 tcttgcatca ataaatctat taatcaaaaa aaaaaggaaa aaaaatcaaa aaggtttgct
     2341 agaccaagta atttgagaac aaaaggagag aaatatatgt taactcctgg gctattgcta
     2401 tgggttaaaa cagctgcact tttgaagctc tttccatgtg acaatatata aatttgtaat
     2461 gcttcagttg gaagcatttt caaccttaaa tgtatttctc tcatcgtata tgagactaca
     2521 ctttcgtatt atgaaaatgg cagaaccagc caactattag gtacattaat agaaaacttt
     2581 tttaaaaata atattgaaat tttttgcttt cctcttaata cttggttgtg tttggttaag
     2641 aaataaattt tgaacttgaa agcggccatc tctttgagag aaattattct aatgatgtta
     2701 ggtgaatatc tgtagggcat gaatactgta tacatgagta aattataaac aacttctctc
     2761 taaaaaagtt ggccgtttta tgaagccaga ctgaatgttt ttgttataat cttatagtcc
     2821 aggctgacct agaactccac aggtgacaga agttgaccgt gaattcctga tcctcctgtc
     2881 tccacactct gagtgctggg attacaggaa taaaccacta ggatacctga atcaaattcc
     2941 tgcagtgttt gatgtttctt tcagtaatgg agtttgaatc caagacctca tgtattctgt
     3001 gcaagtccta catcagtcga gctatattcc cctcttctgg gaaaggtatt tttaatagta
     3061 tattaatagg ttgtatcttg aaccaaataa cacttaggtc ttttttgaag tgataggtag
     3121 gcttactgtc tctattttaa gtgtcttgca acacttttgt cattttatct ggaaaatgtg
     3181 ccagcattta caaggtcctc gtgtttacag aatagtctgc tcagtttgcc tacagcggtt
     3241 gtgctaggca ttctgtacta catttacttt tcaggacgca cgtttttaaa aatttctgtg
     3301 gaaagctacc tagccttctt gaatagtgcc agctattttc tcttaagaga aataatatgg
     3361 taacttagta gtgatgtcaa ggcaagcttg tcgcatgtgt ttgagggtaa tggtagtaga
     3421 tatggcttgc ttttcatggt cctttgtgca ctgaggcaag tgccatgact ctgcctagaa
     3481 tttatttata ggaactgcct ttttttgcta ttaaaaccta ttctggcctg gtgtgatggc
     3541 acatggcaca aatcccagca ttccagaggt aaaagagggt catgagttca aggcctgtct
     3601 aaactacata gcaagataga tcccaccaca aaacaatatc ttaagaaata gaatctgtga
     3661 taagatggag aatttctaag tagcctcctg tttgcatgga taggagctgg cttatctttt
     3721 gttgtgggaa aacagagagt gataaggata gaggatacag agttggtata gatgaactac
     3781 taagaatgtg cttctctgtg gtgattgtat tcagtgataa ttttctcatg actttctggt
     3841 tccagaccaa agcttaaaac tcagtttctt taaatttcca aacaaaataa aacctaccaa
     3901 tggcagttgc atgtatctgg gcacatttta catactaata tgtactttaa ctgcttttat
     3961 gggattccct gtgatctagg ggagcccatt ctctaactaa tagaacagat cttagcagga
     4021 gggacttagt tttcagttat tttatattgc aacattcaga gagagttttg ttctgtgtca
     4081 ctttggtcca gagcaagtcc ctatgtcttt tcttactgag ataatatgtt ggcttcatct
     4141 gagccacagt tttcttttct gaaaatgaga tgttgctgcc ttacttttag gagtgttatg
     4201 aggaccaacc ttaatgttac gacatgaaaa ggctcctaag cgtaattatg gtgcaaagta
     4261 aatgctcaat acgtgctgta tactgttatt atctgacctt taactctgca cttcctagac
     4321 attcagtgat cctcctatcc gaagcactgt ctgaacagca tatttacaga cccccaaata
     4381 cctggtagtt aacttctgtt tttatctctt tgattctgtt tgtactacag ttttgatgta
     4441 agaaataaaa cagaatagta aggtaataca aacactttat ttttaatttt taactctagt
     4501 attgtagtta ttcaaataat gactaattgt ttattaaaag tctaaatcat ggcttaaatt
     4561 gacaagtggt tataaaaata tatttacttg ggggctggag agttagctca ttgggtagga
     4621 gaactggctc ttgcaaagaa tccagattag attcctagta cttgtgtagt gatttagaac
     4681 tgtaactcca gttctaggaa gtctgaatcc tcttctggca tcttagggca gtaggcacac
     4741 aagtgttata tagacataca tgaagaaaga atacccaaac acagaaaata ggatgttttt
     4801 taaaaattat actcagagat atttactttg tatacatagt tattccttct ctgcttgttt
     4861 tccattgcag ctttaatcag gtggagaggt ttttttattt ctttgttgga aatacaaagc
     4921 ttgtcctaat tgaagtttag tatacatacc tccattgatt tagatctgtg atctgtaatg
     4981 ctataaagct agaagcgtgt ctgtgtcata gttgcgacat attagtcagt ctttcctcac
     5041 ctactagcat cagtgtttcc ctctgatggc tcattttcaa gtgacatgaa tactctgcct
     5101 ggtggttgcc gagcctgttc tacctataga ttgaagctca atttaaattg agggctgtct
     5161 acatccctat taaattggat tcttctaaat tctatagaaa atggtgtttg acaataggtt
     5221 tatatgtagc tcagtgattg agttagacac agaaaaagca gagaataggt ctacctcaga
     5281 gtgccttgcc cagcttaggg aaccagagct ataaaggttt agttagttct tgactcacct
     5341 tttgtactta aaagtattat gtaatttgat tcattgactg gttgtgttgt aagcaacact
     5401 gcttgaaaca aatgacctat tggctagaga gtggcccatt tgataaatgg aaaaactgct
     5461 aaatagtgtg gtagtacaca gatgcctgtg accccagaat gcagtaaggg aagacaagag
     5521 gatcatgagt tcacggccac tctaggccac agaggtagcc aatatccaaa ataaataaaa
     5581 ataagactgc aactgatttt tttttaaaga tttatttatt atatttatga gtacactata
     5641 gttgtcctca gatacaccag aagagggcat cggatcccat tacagatggt tgtgagctac
     5701 catgtggttg ctgggaattg aactcaggac ctctggaaga gcagtcagtg ttcttaaccg
     5761 ctgagccatc tctccagtga ttgcaactga ttttaaggct tagaaatttt accttggtta
     5821 tcttgtattt taattgagaa gctttttatg gcattagcta aatggatctg aagaaacaag
     5881 tgtgctggaa aacattaaaa atcctgaaat ggggaatgac cactagaaga cattaaacat
     5941 actgtaattc tataatgaaa gcagtgtgat actaaatggg gtgttagtta catctgcaat
     6001 ctctgcactc aggagataga ggcaggagga tcactgcaag ttttaggcta gcctagtcta
     6061 tatagcaagt tccaggaggg ccagggctat gtagtgagac cctgtcttaa aatatacatt
     6121 gaaaaactct caatgtatta ctgatgaatg aagacacact cttttttttt tttttttttt
     6181 tttttgttct ttttttcgga gctggggacc gaacccaggg ccttgtgctt cctaggcaag
     6241 cgctctacca ctgagctgaa tccccaaccc cttgaagaca cactcttaat ggtaggatta
     6301 gatagtaagc cagaaattca atattcaaaa ttttagtata tgataacagt agggtagact
     6361 ttttcataac tgatgcttgg cagcttacta accattttga aaattataat attagatcta
     6421 tggttttttt gatctagatg gatcagggat agaaattgaa aaaacaatga aaccatatag
     6481 attctagaat gaactatggc aaactctttg atgtgagatt ttgtaactta atgcaaatcc
     6541 agaggtagca atgggcaatg actcatagat tttactatgt tcagggatag tttcattaag
     6601 aaagaaaaaa gataggggtg cctattactt ttgttcctgc ttactagtgt actagaaatt
     6661 gagatagtac aattagaaga attagtcgag cttcgggtgg ggaccttcat gtcttagatc
     6721 tcattacttg gaggcaaaga caggtgaatc agtgttggag gcctgcctag actgtatagt
     6781 gaaactctgt ctcaaaagcc aagaagtagt acaccttttc tgttttcagg caatgtggta
     6841 cagattgtac agtatattcc tttatccaga atgcttgagg ccagaagtat ttctttttcc
     6901 cttcagatta tgaggtgtat atgtgtatgt gtaataatat atcttagagg tggggattca
     6961 agtaaacatg aaattctatt gttttagata tatcttatac acatagcagg aagataattt
     7021 tattcaccaa ttttttttaa tatttggttt attttgacta aagatctatc aatggatcag
     7081 attagaattt tctgttagtt tgtttgtttg tactgggaat tgaacgtagg ggcttgtgtg
     7141 tataccaggc agtcatttta ctactgagcc atattcccta accttcaggg ttttttgcac
     7201 ttaatttgaa acaggatttc ggtaatttgt tgcccagacc atcttaaact cactttgtag
     7261 aggcgggtct tgaatttgaa ctcaatctat ctcccaagta gttggggtaa atttaggctt
     7321 gaggcactag gcccaactgt tatatgaatg gaatattctt ttgtttttta aagatttatt
     7381 tattgtatat gagcacactg taggtgtctt cagacgcacc agaagaaggc atctgatccc
     7441 attacagatg gttgtgagtc accatgtggt tgctgggaat tgaactcagg acctctggaa
     7501 gagcagtcag tgctcctaac cactgagaca tctctccagc ccagaatgga atattcttat
     7561 agtaacatgt tggtacttaa aaatgttttg aattttgaaa cactgcagat tttggattag
     7621 aaagctttaa agaattgatg aatctaactt aaatgttaaa attctgttca gagactggat
     7681 ttggtagcct gaaattctac caattgggaa gtggaggcag aaagatcagg agttcaaggc
     7741 cagcctgagc cacactagat tctgccttcc ttctaaatat taatttttaa accctagtag
     7801 cctttgctat atatacagat aactagttat aggacatgac tggggcaagg aaacaacaat
     7861 gttggaattt atagaatact aggaccaaac tcaaagagaa acatgtaaag cttctatcac
     7921 tcctgagata taaaagtaga ctggaaaatt gggaagataa accttggcta agggctttat
     7981 tactgttaaa aagcctgtaa taccaaaaat actaacaaac ttgtttctgt agaattaggt
     8041 taaccctaga ggtcacaggg gaaagaaagc gtgtaagaat cactaatgga gggtcttgt
//
